RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 THEM6Q8WUY1 208 aa11.18□□□□□ -0.62
CXCL12-202ENST00000374426 AQP3Q92482 292 aa11.18□□□□□ -0.62
CXCL12-202ENST00000374426 PPP1R14AQ96A00 147 aa11.18□□□□□ -0.62
CXCL12-202ENST00000374426 HIST1H2AAQ96QV6 131 aa11.18□□□□□ -0.62
CXCL12-202ENST00000374426 FAM107BQ9H098 131 aa11.18□□□□□ -0.62
CXCL12-202ENST00000374426 ARL8BQ9NVJ2 186 aa11.18□□□□□ -0.62
CXCL12-202ENST00000374426 TAS2R1Q9NYW7 299 aa11.18□□□□□ -0.62
CXCL12-202ENST00000374426 TAGLN3Q9UI15 199 aa11.18□□□□□ -0.62
CXCL12-202ENST00000374426 COL7A1Q02388 2944 aa11.17□□□□□ -0.62
CXCL12-202ENST00000374426 MTRF1O75570 445 aaKnown RBP11.17□□□□□ -0.62
CXCL12-202ENST00000374426 CAPZA1P52907 286 aa11.17□□□□□ -0.62
CXCL12-202ENST00000374426 ERVFRD-1P60508 538 aa11.17□□□□□ -0.62
CXCL12-202ENST00000374426 RPL31P62899 125 aaKnown RBP11.17□□□□□ -0.62
CXCL12-202ENST00000374426 HABP2Q14520 560 aaPredicted RBP11.17□□□□□ -0.62
CXCL12-202ENST00000374426 CEP78Q5JTW2 689 aa11.17□□□□□ -0.62
CXCL12-202ENST00000374426 TMEM200BQ69YZ2 307 aa11.17□□□□□ -0.62
CXCL12-202ENST00000374426 OR2T5Q6IEZ7 315 aa11.17□□□□□ -0.62
CXCL12-202ENST00000374426 PLBD1Q6P4A8 553 aa11.17□□□□□ -0.62
CXCL12-202ENST00000374426 C16orf89Q6UX73 402 aa11.17□□□□□ -0.62
CXCL12-202ENST00000374426 LIAT1Q6ZQX7 453 aa11.17□□□□□ -0.62
CXCL12-202ENST00000374426 THAP5Q7Z6K1 395 aa11.17□□□□□ -0.62
CXCL12-202ENST00000374426 CD177Q8N6Q3 437 aa11.17□□□□□ -0.62
CXCL12-202ENST00000374426 OR10G2Q8NGC3 310 aa11.17□□□□□ -0.62
CXCL12-202ENST00000374426 OR2T29Q8NH02 315 aa11.17□□□□□ -0.62
CXCL12-202ENST00000374426 ZNF671Q8TAW3 534 aa11.17□□□□□ -0.62
CXCL12-202ENST00000374426 FAM81AQ8TBF8 368 aa11.17□□□□□ -0.62
CXCL12-202ENST00000374426 MAGIXQ9H6Y5 334 aa11.17□□□□□ -0.62
CXCL12-202ENST00000374426 HEXA-AS1Q9H8Q6 139 aa11.17□□□□□ -0.62
CXCL12-202ENST00000374426 REEP1Q9H902 201 aa11.17□□□□□ -0.62
CXCL12-202ENST00000374426 ZNF702PQ9H963 129 aa11.17□□□□□ -0.62
CXCL12-202ENST00000374426 MED4Q9NPJ6 270 aa11.17□□□□□ -0.62
CXCL12-202ENST00000374426 SERTAD4Q9NUC0 356 aa11.17□□□□□ -0.62
CXCL12-202ENST00000374426 LRP12Q9Y561 859 aa11.17□□□□□ -0.62
CXCL12-202ENST00000374426 TENM3Q9P273 2699 aa11.17□□□□□ -0.62
CXCL12-202ENST00000374426 RFPL4AA6NLU0 287 aa11.16□□□□□ -0.62
CXCL12-202ENST00000374426 VGLL3A8MV65 326 aa11.16□□□□□ -0.62
CXCL12-202ENST00000374426 RFPL4AL1F8VTS6 287 aa11.16□□□□□ -0.62
CXCL12-202ENST00000374426 H3BN98 237 aa11.16□□□□□ -0.62
CXCL12-202ENST00000374426 CD28P10747 220 aa11.16□□□□□ -0.62
CXCL12-202ENST00000374426 PAICSP22234 425 aaKnown RBP11.16□□□□□ -0.62
CXCL12-202ENST00000374426 COX7A1P24310 79 aa11.16□□□□□ -0.62
CXCL12-202ENST00000374426 MAP2K3P46734 347 aa11.16□□□□□ -0.62
CXCL12-202ENST00000374426 NSUN5P1Q3KNT7 163 aa11.16□□□□□ -0.62
CXCL12-202ENST00000374426 HAGHLQ6PII5 290 aaPredicted RBP11.16□□□□□ -0.62
CXCL12-202ENST00000374426 ACP7Q6ZNF0 438 aa11.16□□□□□ -0.62
CXCL12-202ENST00000374426 TRPM8Q7Z2W7 1104 aa11.16□□□□□ -0.62
CXCL12-202ENST00000374426 LHFPL4Q7Z7J7 247 aa11.16□□□□□ -0.62
CXCL12-202ENST00000374426 Q8N2B8 174 aa11.16□□□□□ -0.62
CXCL12-202ENST00000374426 OR5A2Q8NGI9 324 aa11.16□□□□□ -0.62
CXCL12-202ENST00000374426 MRAPQ8TCY5 172 aa11.16□□□□□ -0.62
CXCL12-202ENST00000374426 WIPF2Q8TF74 440 aaPredicted RBP11.16□□□□□ -0.62
CXCL12-202ENST00000374426 FEVQ99581 238 aa11.16□□□□□ -0.62
CXCL12-202ENST00000374426 NKX3-1Q99801 234 aaPredicted RBP11.16□□□□□ -0.62
CXCL12-202ENST00000374426 MMP28Q9H239 520 aa11.16□□□□□ -0.62
CXCL12-202ENST00000374426 NIPAL2Q9H841 368 aa11.16□□□□□ -0.62
CXCL12-202ENST00000374426 RASL12Q9NYN1 266 aa11.16□□□□□ -0.62
CXCL12-202ENST00000374426 A0A0U1RQV5 110 aa11.15□□□□□ -0.62
CXCL12-202ENST00000374426 FAM90A8PA6NJQ4 464 aa11.15□□□□□ -0.62
CXCL12-202ENST00000374426 OR5B21A6NL26 309 aa11.15□□□□□ -0.62
CXCL12-202ENST00000374426 ADARB2-AS1A8MUL3 147 aa11.15□□□□□ -0.62
CXCL12-202ENST00000374426 PRR23D1E9PI22 279 aaPredicted RBP11.15□□□□□ -0.62
CXCL12-202ENST00000374426 XPNPEP2O43895 674 aa11.15□□□□□ -0.62
CXCL12-202ENST00000374426 FBXO24O75426 580 aa11.15□□□□□ -0.62
CXCL12-202ENST00000374426 PRR23D2P0DMB1 279 aaPredicted RBP11.15□□□□□ -0.62
CXCL12-202ENST00000374426 CCL3L1P16619 93 aa11.15□□□□□ -0.62
CXCL12-202ENST00000374426 ALOX5APP20292 161 aa11.15□□□□□ -0.62
CXCL12-202ENST00000374426 LOXL3P58215 753 aa11.15□□□□□ -0.62
CXCL12-202ENST00000374426 CCBE1Q6UXH8 406 aaPredicted RBP11.15□□□□□ -0.62
CXCL12-202ENST00000374426 DYNAPQ8N1N2 210 aa11.15□□□□□ -0.62
CXCL12-202ENST00000374426 DTX3Q8N9I9 347 aa11.15□□□□□ -0.62
CXCL12-202ENST00000374426 POC1AQ8NBT0 407 aa11.15□□□□□ -0.62
CXCL12-202ENST00000374426 OR4M1Q8NGD0 313 aa11.15□□□□□ -0.62
CXCL12-202ENST00000374426 ZNF488Q96MN9 340 aa11.15□□□□□ -0.62
CXCL12-202ENST00000374426 NECAP2Q9NVZ3 263 aa11.15□□□□□ -0.62
CXCL12-202ENST00000374426 FAM206AQ9NX38 181 aa11.15□□□□□ -0.62
CXCL12-202ENST00000374426 NDE1Q9NXR1 346 aa11.15□□□□□ -0.62
CXCL12-202ENST00000374426 RYR3Q15413 4870 aa11.14□□□□□ -0.63
CXCL12-202ENST00000374426 A0A1W2PPH5 198 aa11.14□□□□□ -0.63
CXCL12-202ENST00000374426 SLC1A7O00341 560 aa11.14□□□□□ -0.63
CXCL12-202ENST00000374426 PRODHO43272 600 aa11.14□□□□□ -0.63
CXCL12-202ENST00000374426 IGLV3-1P01715 115 aa11.14□□□□□ -0.63
CXCL12-202ENST00000374426 FAHP16930 419 aa11.14□□□□□ -0.63
CXCL12-202ENST00000374426 PRDX2P32119 198 aa11.14□□□□□ -0.63
CXCL12-202ENST00000374426 CEBPDP49716 269 aaPredicted RBP11.14□□□□□ -0.63
CXCL12-202ENST00000374426 RAB13P51153 203 aa11.14□□□□□ -0.63
CXCL12-202ENST00000374426 HCCSP53701 268 aa11.14□□□□□ -0.63
CXCL12-202ENST00000374426 LGALS4P56470 323 aa11.14□□□□□ -0.63
CXCL12-202ENST00000374426 EMX1Q04741 257 aaPredicted RBP11.14□□□□□ -0.63
CXCL12-202ENST00000374426 ZNF273Q14593 569 aa11.14□□□□□ -0.63
CXCL12-202ENST00000374426 GINS1Q14691 196 aa11.14□□□□□ -0.63
CXCL12-202ENST00000374426 SMIM21Q3B7S5 101 aa11.14□□□□□ -0.63
CXCL12-202ENST00000374426 PLA1AQ53H76 456 aa11.14□□□□□ -0.63
CXCL12-202ENST00000374426 LCN8Q6JVE9 175 aa11.14□□□□□ -0.63
CXCL12-202ENST00000374426 ZNF782Q6ZMW2 699 aaPredicted RBP11.14□□□□□ -0.63
CXCL12-202ENST00000374426 MOB3CQ70IA8 216 aa11.14□□□□□ -0.63
CXCL12-202ENST00000374426 KRT77Q7Z794 578 aa11.14□□□□□ -0.63
CXCL12-202ENST00000374426 NDUFA11Q86Y39 141 aa11.14□□□□□ -0.63
CXCL12-202ENST00000374426 CPOQ8IVL8 374 aa11.14□□□□□ -0.63
CXCL12-202ENST00000374426 ZNF561Q8N587 486 aa11.14□□□□□ -0.63
CXCL12-202ENST00000374426 BBS1Q8NFJ9 593 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms