RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 SGPP2Q8IWX5 399 aa16.75■□□□□ 0.27
RTN4-201ENST00000317610 OR9K2Q8NGE7 335 aa16.75■□□□□ 0.27
RTN4-201ENST00000317610 SCRT1Q9BWW7 348 aa16.75■□□□□ 0.27
RTN4-201ENST00000317610 TPSD1Q9BZJ3 242 aa16.75■□□□□ 0.27
RTN4-201ENST00000317610 TUBA4BQ9H853 241 aa16.75■□□□□ 0.27
RTN4-201ENST00000317610 FGF21Q9NSA1 209 aa16.75■□□□□ 0.27
RTN4-201ENST00000317610 RALGAPA1Q6GYQ0 2036 aa16.75■□□□□ 0.27
RTN4-201ENST00000317610 A0A0U1RQV5 110 aa16.74■□□□□ 0.27
RTN4-201ENST00000317610 C1orf196B1AJZ1 125 aa16.74■□□□□ 0.27
RTN4-201ENST00000317610 SERPINA2P20848 420 aa16.74■□□□□ 0.27
RTN4-201ENST00000317610 SNRPEP62304 92 aaKnown RBP16.74■□□□□ 0.27
RTN4-201ENST00000317610 UBE2V2Q15819 145 aa16.74■□□□□ 0.27
RTN4-201ENST00000317610 GGNBP1Q5YKI7 109 aa16.74■□□□□ 0.27
RTN4-201ENST00000317610 ETV3LQ6ZN32 361 aa16.74■□□□□ 0.27
RTN4-201ENST00000317610 SECTM1Q8WVN6 248 aa16.74■□□□□ 0.27
RTN4-201ENST00000317610 PGAM5Q96HS1 289 aa16.74■□□□□ 0.27
RTN4-201ENST00000317610 ZNF2Q9BSG1 426 aaPredicted RBP16.74■□□□□ 0.27
RTN4-201ENST00000317610 MCTS1Q9ULC4 181 aaKnown RBP16.74■□□□□ 0.27
RTN4-201ENST00000317610 LOC102725191A0A1B0GVB3 256 aa16.74■□□□□ 0.27
RTN4-201ENST00000317610 DHRS7CA6NNS2 312 aa16.74■□□□□ 0.27
RTN4-201ENST00000317610 UBE2CO00762 179 aa16.74■□□□□ 0.27
RTN4-201ENST00000317610 IFNA21P01568 189 aa16.74■□□□□ 0.27
RTN4-201ENST00000317610 SMIM6P0DI80 62 aa16.74■□□□□ 0.27
RTN4-201ENST00000317610 LSM6P62312 80 aaKnown RBP16.74■□□□□ 0.27
RTN4-201ENST00000317610 MRPL24Q96A35 216 aaKnown RBP16.74■□□□□ 0.27
RTN4-201ENST00000317610 FAM212BQ9NTI7 297 aaPredicted RBP16.74■□□□□ 0.27
RTN4-201ENST00000317610 TRBV11-1A0A0K0K1C0 115 aa16.73■□□□□ 0.27
RTN4-201ENST00000317610 A0A1W2PNR3 127 aa16.73■□□□□ 0.27
RTN4-201ENST00000317610 DHRS3O75911 302 aa16.73■□□□□ 0.27
RTN4-201ENST00000317610 S100A8P05109 93 aa16.73■□□□□ 0.27
RTN4-201ENST00000317610 SNCAP37840 140 aa16.73■□□□□ 0.27
RTN4-201ENST00000317610 PP6455Q8WZ26 134 aa16.73■□□□□ 0.27
RTN4-201ENST00000317610 HAS2Q92819 552 aa16.73■□□□□ 0.27
RTN4-201ENST00000317610 CHST5Q9GZS9 411 aa16.73■□□□□ 0.27
RTN4-201ENST00000317610 ZNF701Q9NV72 531 aaPredicted RBP16.73■□□□□ 0.27
RTN4-201ENST00000317610 RAMP1O60894 148 aa16.73■□□□□ 0.27
RTN4-201ENST00000317610 MT-ND4LP03901 98 aa16.73■□□□□ 0.27
RTN4-201ENST00000317610 OPN1LWP04000 364 aa16.73■□□□□ 0.27
RTN4-201ENST00000317610 ZNF43P17038 809 aa16.73■□□□□ 0.27
RTN4-201ENST00000317610 AGAP20933 346 aa16.73■□□□□ 0.27
RTN4-201ENST00000317610 PMELP40967 661 aa16.73■□□□□ 0.27
RTN4-201ENST00000317610 DMRTC1Q5HYR2 192 aa16.73■□□□□ 0.27
RTN4-201ENST00000317610 RHBDD2Q6NTF9 364 aa16.73■□□□□ 0.27
RTN4-201ENST00000317610 TSTD1Q8NFU3 115 aa16.73■□□□□ 0.27
RTN4-201ENST00000317610 NPRL2Q8WTW4 380 aa16.73■□□□□ 0.27
RTN4-201ENST00000317610 SLC39A7Q92504 469 aa16.73■□□□□ 0.27
RTN4-201ENST00000317610 AQP7P3A6NL99 342 aa16.72■□□□□ 0.27
RTN4-201ENST00000317610 MSTNO14793 375 aa16.72■□□□□ 0.27
RTN4-201ENST00000317610 SEC11BP0C7V7 166 aa16.72■□□□□ 0.27
RTN4-201ENST00000317610 DANCRP0C864 163 aa16.72■□□□□ 0.27
RTN4-201ENST00000317610 ZNF44P15621 663 aa16.72■□□□□ 0.27
RTN4-201ENST00000317610 LTBRP36941 435 aa16.72■□□□□ 0.27
RTN4-201ENST00000317610 NXPH1P58417 271 aa16.72■□□□□ 0.27
RTN4-201ENST00000317610 GALNTL5Q7Z4T8 443 aa16.72■□□□□ 0.27
RTN4-201ENST00000317610 OR2M3Q8NG83 312 aa16.72■□□□□ 0.27
RTN4-201ENST00000317610 ERGIC1Q969X5 290 aa16.72■□□□□ 0.27
RTN4-201ENST00000317610 TAAR9Q96RI9 348 aa16.72■□□□□ 0.27
RTN4-201ENST00000317610 WDR77Q9BQA1 342 aaPredicted RBP16.72■□□□□ 0.27
RTN4-201ENST00000317610 RANBP2P49792 3224 aaKnown RBP16.72■□□□□ 0.27
RTN4-201ENST00000317610 ZNF726A6NNF4 738 aa16.71■□□□□ 0.27
RTN4-201ENST00000317610 PIAS2O75928 621 aa16.71■□□□□ 0.27
RTN4-201ENST00000317610 FCGR2AP12318 317 aa16.71■□□□□ 0.27
RTN4-201ENST00000317610 PPT1P50897 306 aa16.71■□□□□ 0.27
RTN4-201ENST00000317610 ZNF133P52736 654 aaPredicted RBP16.71■□□□□ 0.27
RTN4-201ENST00000317610 TSC22D1Q15714 1073 aa16.71■□□□□ 0.27
RTN4-201ENST00000317610 C6orf201Q7Z4U5 140 aa16.71■□□□□ 0.27
RTN4-201ENST00000317610 DTX1Q86Y01 620 aa16.71■□□□□ 0.27
RTN4-201ENST00000317610 ZNF561Q8N587 486 aa16.71■□□□□ 0.27
RTN4-201ENST00000317610 C10orf35Q96D05 121 aa16.71■□□□□ 0.27
RTN4-201ENST00000317610 SMIM3Q9BZL3 60 aa16.71■□□□□ 0.27
RTN4-201ENST00000317610 PADI1Q9ULC6 663 aa16.71■□□□□ 0.27
RTN4-201ENST00000317610 EDARQ9UNE0 448 aa16.71■□□□□ 0.27
RTN4-201ENST00000317610 LSM5Q9Y4Y9 91 aaKnown RBP16.71■□□□□ 0.27
RTN4-201ENST00000317610 NCOA6Q14686 2063 aaPredicted RBP16.71■□□□□ 0.27
RTN4-201ENST00000317610 E5RGE8 158 aa16.71■□□□□ 0.27
RTN4-201ENST00000317610 LINC01387J3KSC0 135 aa16.71■□□□□ 0.27
RTN4-201ENST00000317610 TSPAN15O95858 294 aa16.71■□□□□ 0.27
RTN4-201ENST00000317610 HEXBP07686 556 aa16.71■□□□□ 0.27
RTN4-201ENST00000317610 LMO1P25800 156 aa16.71■□□□□ 0.27
RTN4-201ENST00000317610 SUCLG1P53597 346 aaKnown RBP16.71■□□□□ 0.27
RTN4-201ENST00000317610 SLC38A9Q8NBW4 561 aa16.71■□□□□ 0.27
RTN4-201ENST00000317610 OR5L2Q8NGL0 311 aa16.71■□□□□ 0.27
RTN4-201ENST00000317610 Q96M66 194 aa16.71■□□□□ 0.27
RTN4-201ENST00000317610 S100A13Q99584 98 aa16.71■□□□□ 0.27
RTN4-201ENST00000317610 GINS3Q9BRX5 216 aa16.71■□□□□ 0.27
RTN4-201ENST00000317610 ZNF160Q9HCG1 818 aa16.71■□□□□ 0.27
RTN4-201ENST00000317610 RPS10P5Q9NQ39 176 aa16.71■□□□□ 0.27
RTN4-201ENST00000317610 NSG2Q9Y328 171 aa16.71■□□□□ 0.27
RTN4-201ENST00000317610 SZT2Q5T011 3432 aa16.71■□□□□ 0.27
RTN4-201ENST00000317610 ASXL3Q9C0F0 2248 aa16.71■□□□□ 0.27
RTN4-201ENST00000317610 SPTBN5Q9NRC6 3674 aaKnown RBP16.71■□□□□ 0.27
RTN4-201ENST00000317610 FAHP16930 419 aa16.7■□□□□ 0.26
RTN4-201ENST00000317610 EIF2S3LQ2VIR3 472 aaKnown RBP16.7■□□□□ 0.26
RTN4-201ENST00000317610 MIDNQ504T8 468 aa16.7■□□□□ 0.26
RTN4-201ENST00000317610 AWAT1Q58HT5 328 aa16.7■□□□□ 0.26
RTN4-201ENST00000317610 RPUSD3Q6P087 351 aaKnown RBP16.7■□□□□ 0.26
RTN4-201ENST00000317610 CCDC54Q8NEL0 328 aa16.7■□□□□ 0.26
RTN4-201ENST00000317610 OR10G3Q8NGC4 313 aa16.7■□□□□ 0.26
RTN4-201ENST00000317610 NAA11Q9BSU3 229 aaPredicted RBP16.7■□□□□ 0.26
RTN4-201ENST00000317610 METTL7AQ9H8H3 244 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 274.6 ms