RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 GDPGP1Q6ZNW5 385 aa11.9□□□□□ -0.5
VPS25-201ENST00000253794 CEACAM19Q7Z692 300 aa11.9□□□□□ -0.5
VPS25-201ENST00000253794 MOGAT3Q86VF5 341 aa11.9□□□□□ -0.5
VPS25-201ENST00000253794 LYPD6Q86Y78 171 aa11.9□□□□□ -0.5
VPS25-201ENST00000253794 OR51A2Q8NGJ7 313 aa11.9□□□□□ -0.5
VPS25-201ENST00000253794 HPS1Q92902 700 aa11.9□□□□□ -0.5
VPS25-201ENST00000253794 BORCS8Q96FH0 119 aa11.9□□□□□ -0.5
VPS25-201ENST00000253794 CPNE2Q96FN4 548 aaPredicted RBP11.9□□□□□ -0.5
VPS25-201ENST00000253794 TEX15Q9BXT5 2789 aa11.9□□□□□ -0.5
VPS25-201ENST00000253794 PPIL3Q9H2H8 161 aaKnown RBP11.9□□□□□ -0.5
VPS25-201ENST00000253794 TMEM138Q9NPI0 162 aa11.9□□□□□ -0.5
VPS25-201ENST00000253794 TMEM106BQ9NUM4 274 aa11.9□□□□□ -0.5
VPS25-201ENST00000253794 OTOGQ6ZRI0 2925 aa11.9□□□□□ -0.51
VPS25-201ENST00000253794 CHD3Q12873 2000 aaKnown RBP11.89□□□□□ -0.51
VPS25-201ENST00000253794 TRAV1-2A0A0B4J238 106 aa11.89□□□□□ -0.51
VPS25-201ENST00000253794 LRRC30A6NM36 301 aa11.89□□□□□ -0.51
VPS25-201ENST00000253794 J3QT63 122 aa11.89□□□□□ -0.51
VPS25-201ENST00000253794 SSX4O60224 188 aa11.89□□□□□ -0.51
VPS25-201ENST00000253794 NOS1APO75052 506 aaPredicted RBP11.89□□□□□ -0.51
VPS25-201ENST00000253794 BDKRB2P30411 391 aa11.89□□□□□ -0.51
VPS25-201ENST00000253794 PDLIM4P50479 330 aa11.89□□□□□ -0.51
VPS25-201ENST00000253794 ATP1B3P54709 279 aa11.89□□□□□ -0.51
VPS25-201ENST00000253794 IL24Q13007 206 aa11.89□□□□□ -0.51
VPS25-201ENST00000253794 TIMM50Q3ZCQ8 353 aa11.89□□□□□ -0.51
VPS25-201ENST00000253794 FAM27D1Q5T7N8 215 aa11.89□□□□□ -0.51
VPS25-201ENST00000253794 WDR82Q6UXN9 313 aa11.89□□□□□ -0.51
VPS25-201ENST00000253794 ZNF525Q8N782 197 aa11.89□□□□□ -0.51
VPS25-201ENST00000253794 NKAIN3Q8N8D7 197 aa11.89□□□□□ -0.51
VPS25-201ENST00000253794 SCCPDHQ8NBX0 429 aa11.89□□□□□ -0.51
VPS25-201ENST00000253794 C10orf105Q8TEF2 133 aa11.89□□□□□ -0.51
VPS25-201ENST00000253794 AQP3Q92482 292 aa11.89□□□□□ -0.51
VPS25-201ENST00000253794 ORAI1Q96D31 301 aa11.89□□□□□ -0.51
VPS25-201ENST00000253794 CACNG2Q9Y698 323 aa11.89□□□□□ -0.51
VPS25-201ENST00000253794 PRRC2AP48634 2157 aaKnown RBP11.89□□□□□ -0.51
VPS25-201ENST00000253794 A0A1W2PPK0 400 aa11.88□□□□□ -0.51
VPS25-201ENST00000253794 MEGF11A6BM72 1044 aa11.88□□□□□ -0.51
VPS25-201ENST00000253794 VWC2LB2RUY7 222 aa11.88□□□□□ -0.51
VPS25-201ENST00000253794 TMEM178BH3BS89 294 aa11.88□□□□□ -0.51
VPS25-201ENST00000253794 CDIPTO14735 213 aa11.88□□□□□ -0.51
VPS25-201ENST00000253794 GRPP07492 148 aa11.88□□□□□ -0.51
VPS25-201ENST00000253794 SRMP19623 302 aa11.88□□□□□ -0.51
VPS25-201ENST00000253794 RPL5P46777 297 aaKnown RBP11.88□□□□□ -0.51
VPS25-201ENST00000253794 HAAOP46952 286 aa11.88□□□□□ -0.51
VPS25-201ENST00000253794 KISS1Q15726 138 aa11.88□□□□□ -0.51
VPS25-201ENST00000253794 DMRTC1Q5HYR2 192 aa11.88□□□□□ -0.51
VPS25-201ENST00000253794 Q5PR19 223 aa11.88□□□□□ -0.51
VPS25-201ENST00000253794 CLEC2AQ6UVW9 174 aa11.88□□□□□ -0.51
VPS25-201ENST00000253794 LRRTM1Q86UE6 522 aa11.88□□□□□ -0.51
VPS25-201ENST00000253794 CALHM1Q8IU99 346 aa11.88□□□□□ -0.51
VPS25-201ENST00000253794 TGIF2LYQ8IUE0 185 aa11.88□□□□□ -0.51
VPS25-201ENST00000253794 C1orf87Q8N0U7 546 aa11.88□□□□□ -0.51
VPS25-201ENST00000253794 GCSAMQ8N6F7 178 aa11.88□□□□□ -0.51
VPS25-201ENST00000253794 OR11L1Q8NGX0 322 aa11.88□□□□□ -0.51
VPS25-201ENST00000253794 RPL3LQ92901 407 aaKnown RBP11.88□□□□□ -0.51
VPS25-201ENST00000253794 SNTG1Q9NSN8 517 aa11.88□□□□□ -0.51
VPS25-201ENST00000253794 C1orf123Q9NWV4 160 aa11.88□□□□□ -0.51
VPS25-201ENST00000253794 TXNL4BQ9NX01 149 aaKnown RBP11.88□□□□□ -0.51
VPS25-201ENST00000253794 RNF7Q9UBF6 113 aa11.88□□□□□ -0.51
VPS25-201ENST00000253794 SCOCQ9UIL1 159 aa11.88□□□□□ -0.51
VPS25-201ENST00000253794 POLDIP2Q9Y2S7 368 aa11.88□□□□□ -0.51
VPS25-201ENST00000253794 FAM230AA0A1W2PPH8 454 aa11.87□□□□□ -0.51
VPS25-201ENST00000253794 SRRM5B3KS81 715 aa11.87□□□□□ -0.51
VPS25-201ENST00000253794 CLDN25C9JDP6 229 aa11.87□□□□□ -0.51
VPS25-201ENST00000253794 LYNX1G3V0Z9 82 aa11.87□□□□□ -0.51
VPS25-201ENST00000253794 CDC14BO60729 498 aa11.87□□□□□ -0.51
VPS25-201ENST00000253794 LYNX1P0DP58 116 aa11.87□□□□□ -0.51
VPS25-201ENST00000253794 ADRA2CP18825 462 aa11.87□□□□□ -0.51
VPS25-201ENST00000253794 GADD45AP24522 165 aa11.87□□□□□ -0.51
VPS25-201ENST00000253794 MTCP1P56278 107 aa11.87□□□□□ -0.51
VPS25-201ENST00000253794 ZP1P60852 638 aa11.87□□□□□ -0.51
VPS25-201ENST00000253794 ERVK11-1P61568 191 aa11.87□□□□□ -0.51
VPS25-201ENST00000253794 CLEC12BQ2HXU8 276 aa11.87□□□□□ -0.51
VPS25-201ENST00000253794 HAGHLQ6PII5 290 aaPredicted RBP11.87□□□□□ -0.51
VPS25-201ENST00000253794 ASCL4Q6XD76 172 aa11.87□□□□□ -0.51
VPS25-201ENST00000253794 ZNF826PQ6ZT77 177 aa11.87□□□□□ -0.51
VPS25-201ENST00000253794 SAXO1Q8IYX7 474 aa11.87□□□□□ -0.51
VPS25-201ENST00000253794 ZSCAN4Q8NAM6 433 aaPredicted RBP11.87□□□□□ -0.51
VPS25-201ENST00000253794 OR52N4Q8NGI2 321 aa11.87□□□□□ -0.51
VPS25-201ENST00000253794 ZNF420Q8TAQ5 688 aaPredicted RBP11.87□□□□□ -0.51
VPS25-201ENST00000253794 TRMT10AQ8TBZ6 339 aaKnown RBP11.87□□□□□ -0.51
VPS25-201ENST00000253794 NPRL2Q8WTW4 380 aa11.87□□□□□ -0.51
VPS25-201ENST00000253794 FAM168AQ92567 244 aa11.87□□□□□ -0.51
VPS25-201ENST00000253794 CCL17Q92583 94 aa11.87□□□□□ -0.51
VPS25-201ENST00000253794 OR51E2Q9H255 320 aa11.87□□□□□ -0.51
VPS25-201ENST00000253794 METTL17Q9H7H0 456 aaPredicted RBP11.87□□□□□ -0.51
VPS25-201ENST00000253794 RHOFQ9HBH0 211 aa11.87□□□□□ -0.51
VPS25-201ENST00000253794 TCF7L1Q9HCS4 588 aa11.87□□□□□ -0.51
VPS25-201ENST00000253794 UFSP2Q9NUQ7 469 aa11.87□□□□□ -0.51
VPS25-201ENST00000253794 SSR3Q9UNL2 185 aa11.87□□□□□ -0.51
VPS25-201ENST00000253794 MAP1AP78559 2803 aaPredicted RBP11.87□□□□□ -0.51
VPS25-201ENST00000253794 MYO9AB2RTY4 2548 aa11.86□□□□□ -0.51
VPS25-201ENST00000253794 IGHV3-64DA0A0J9YX35 117 aa11.86□□□□□ -0.51
VPS25-201ENST00000253794 A6NLC8 198 aa11.86□□□□□ -0.51
VPS25-201ENST00000253794 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.86□□□□□ -0.51
VPS25-201ENST00000253794 MAGEB3O15480 346 aa11.86□□□□□ -0.51
VPS25-201ENST00000253794 HCKP08631 526 aa11.86□□□□□ -0.51
VPS25-201ENST00000253794 OCMP0CE72 109 aaPredicted RBP11.86□□□□□ -0.51
VPS25-201ENST00000253794 PGA5P0DJD9 388 aa11.86□□□□□ -0.51
VPS25-201ENST00000253794 IRF2P14316 349 aa11.86□□□□□ -0.51
VPS25-201ENST00000253794 SLC25A16P16260 332 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 247.1 ms