RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 FAM90A8PA6NJQ4 464 aa8.4□□□□□ -1.06
PHGDH-215ENST00000641371 FAM90A7PA6NKC0 464 aa8.4□□□□□ -1.06
PHGDH-215ENST00000641371 CD300LBA8K4G0 201 aa8.4□□□□□ -1.06
PHGDH-215ENST00000641371 FAM90A22PA8MWA6 464 aa8.4□□□□□ -1.06
PHGDH-215ENST00000641371 FAM90A12PA8MX19 464 aa8.4□□□□□ -1.06
PHGDH-215ENST00000641371 FAM90A5PA8MXJ8 464 aa8.4□□□□□ -1.06
PHGDH-215ENST00000641371 FAM90A23PA8MXZ1 464 aa8.4□□□□□ -1.06
PHGDH-215ENST00000641371 K7EM74 188 aa8.4□□□□□ -1.06
PHGDH-215ENST00000641371 RAB27BO00194 218 aa8.4□□□□□ -1.06
PHGDH-215ENST00000641371 PRAF2O60831 178 aa8.4□□□□□ -1.06
PHGDH-215ENST00000641371 CRTAPO75718 401 aaPredicted RBP8.4□□□□□ -1.06
PHGDH-215ENST00000641371 MPIG6BO95866 241 aa8.4□□□□□ -1.06
PHGDH-215ENST00000641371 IGLV1-44P01699 117 aa8.4□□□□□ -1.06
PHGDH-215ENST00000641371 FAM90A15PP0C7V4 464 aa8.4□□□□□ -1.06
PHGDH-215ENST00000641371 FAM90A13PP0C7W8 464 aa8.4□□□□□ -1.06
PHGDH-215ENST00000641371 FAM90A14PP0C7W9 464 aa8.4□□□□□ -1.06
PHGDH-215ENST00000641371 FAM90A24PP0C7X0 464 aa8.4□□□□□ -1.06
PHGDH-215ENST00000641371 FAM157BP0CG42 384 aa8.4□□□□□ -1.06
PHGDH-215ENST00000641371 TMEM225BP0DP42 221 aa8.4□□□□□ -1.06
PHGDH-215ENST00000641371 GTF2F2P13984 249 aa8.4□□□□□ -1.06
PHGDH-215ENST00000641371 PMELP40967 661 aa8.4□□□□□ -1.06
PHGDH-215ENST00000641371 KIR2DL3P43628 341 aa8.4□□□□□ -1.06
PHGDH-215ENST00000641371 OR3A4PP47883 348 aa8.4□□□□□ -1.06
PHGDH-215ENST00000641371 EFNB2P52799 333 aa8.4□□□□□ -1.06
PHGDH-215ENST00000641371 RAB25P57735 213 aa8.4□□□□□ -1.06
PHGDH-215ENST00000641371 ZP1P60852 638 aa8.4□□□□□ -1.06
PHGDH-215ENST00000641371 RPS27AP62979 156 aaKnown RBP8.4□□□□□ -1.06
PHGDH-215ENST00000641371 UNC119Q13432 240 aa8.4□□□□□ -1.06
PHGDH-215ENST00000641371 RSU1Q15404 277 aa8.4□□□□□ -1.06
PHGDH-215ENST00000641371 ZNF260Q3ZCT1 412 aa8.4□□□□□ -1.06
PHGDH-215ENST00000641371 AGAP6Q5VW22 663 aa8.4□□□□□ -1.06
PHGDH-215ENST00000641371 RSBN1Q5VWQ0 802 aaPredicted RBP8.4□□□□□ -1.06
PHGDH-215ENST00000641371 MYO7BQ6PIF6 2116 aa8.4□□□□□ -1.06
PHGDH-215ENST00000641371 SEM1Q6ZVN7 128 aa8.4□□□□□ -1.06
PHGDH-215ENST00000641371 MOB3CQ70IA8 216 aa8.4□□□□□ -1.06
PHGDH-215ENST00000641371 BTN2A1Q7KYR7 527 aa8.4□□□□□ -1.06
PHGDH-215ENST00000641371 LINC00596Q86U02 117 aa8.4□□□□□ -1.06
PHGDH-215ENST00000641371 TMEM200AQ86VY9 491 aa8.4□□□□□ -1.06
PHGDH-215ENST00000641371 ZNF573Q86YE8 665 aa8.4□□□□□ -1.06
PHGDH-215ENST00000641371 MKXQ8IYA7 352 aa8.4□□□□□ -1.06
PHGDH-215ENST00000641371 CISD2Q8N5K1 135 aaKnown RBP8.4□□□□□ -1.06
PHGDH-215ENST00000641371 ZNF610Q8N9Z0 462 aa8.4□□□□□ -1.06
PHGDH-215ENST00000641371 OR56B2PQ8NGI1 322 aa8.4□□□□□ -1.06
PHGDH-215ENST00000641371 OR56B4Q8NH76 319 aa8.4□□□□□ -1.06
PHGDH-215ENST00000641371 PIGCQ92535 297 aa8.4□□□□□ -1.06
PHGDH-215ENST00000641371 MUCL1Q96DR8 90 aa8.4□□□□□ -1.06
PHGDH-215ENST00000641371 RAB3CQ96E17 227 aa8.4□□□□□ -1.06
PHGDH-215ENST00000641371 SOX7Q9BT81 388 aa8.4□□□□□ -1.06
PHGDH-215ENST00000641371 PAPOLGQ9BWT3 736 aaKnown RBP8.4□□□□□ -1.06
PHGDH-215ENST00000641371 CACNG6Q9BXT2 260 aa8.4□□□□□ -1.06
PHGDH-215ENST00000641371 LPAR5Q9H1C0 372 aa8.4□□□□□ -1.06
PHGDH-215ENST00000641371 PLK3Q9H4B4 646 aa8.4□□□□□ -1.06
PHGDH-215ENST00000641371 NOX3Q9HBY0 568 aa8.4□□□□□ -1.06
PHGDH-215ENST00000641371 GPR173Q9NS66 373 aa8.4□□□□□ -1.06
PHGDH-215ENST00000641371 ING4Q9UNL4 249 aa8.4□□□□□ -1.06
PHGDH-215ENST00000641371 CACNA1BQ00975 2339 aa8.4□□□□□ -1.07
PHGDH-215ENST00000641371 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.39□□□□□ -1.07
PHGDH-215ENST00000641371 MED19A0JLT2 244 aaPredicted RBP8.39□□□□□ -1.07
PHGDH-215ENST00000641371 C5orf63A6NC05 138 aa8.39□□□□□ -1.07
PHGDH-215ENST00000641371 ZNF503-AS2A6NEH8 195 aa8.39□□□□□ -1.07
PHGDH-215ENST00000641371 INMT-MINDY4F8WBC2 141 aa8.39□□□□□ -1.07
PHGDH-215ENST00000641371 SMPD2O60906 423 aa8.39□□□□□ -1.07
PHGDH-215ENST00000641371 GLI4P10075 376 aa8.39□□□□□ -1.07
PHGDH-215ENST00000641371 HIST1H1DP16402 221 aaKnown RBP8.39□□□□□ -1.07
PHGDH-215ENST00000641371 MGMTP16455 207 aa8.39□□□□□ -1.07
PHGDH-215ENST00000641371 HLA-DMAP28067 261 aa8.39□□□□□ -1.07
PHGDH-215ENST00000641371 IDH3GP51553 393 aaPredicted RBP8.39□□□□□ -1.07
PHGDH-215ENST00000641371 UCP2P55851 309 aa8.39□□□□□ -1.07
PHGDH-215ENST00000641371 GNG2P59768 71 aa8.39□□□□□ -1.07
PHGDH-215ENST00000641371 PPP1CBP62140 327 aa8.39□□□□□ -1.07
PHGDH-215ENST00000641371 RPS23P62266 143 aaKnown RBP8.39□□□□□ -1.07
PHGDH-215ENST00000641371 GNG3P63215 75 aa8.39□□□□□ -1.07
PHGDH-215ENST00000641371 FOXF2Q12947 444 aa8.39□□□□□ -1.07
PHGDH-215ENST00000641371 PRDX4Q13162 271 aa8.39□□□□□ -1.07
PHGDH-215ENST00000641371 TNK1Q13470 666 aa8.39□□□□□ -1.07
PHGDH-215ENST00000641371 PCGF3Q3KNV8 242 aa8.39□□□□□ -1.07
PHGDH-215ENST00000641371 SLC22A6Q4U2R8 563 aa8.39□□□□□ -1.07
PHGDH-215ENST00000641371 PLA1AQ53H76 456 aa8.39□□□□□ -1.07
PHGDH-215ENST00000641371 UNQ6494/PRO21346Q6UXR6 183 aa8.39□□□□□ -1.07
PHGDH-215ENST00000641371 Q6ZTK2 550 aa8.39□□□□□ -1.07
PHGDH-215ENST00000641371 CXorf67Q86X51 503 aaPredicted RBP8.39□□□□□ -1.07
PHGDH-215ENST00000641371 IZUMO1Q8IYV9 350 aa8.39□□□□□ -1.07
PHGDH-215ENST00000641371 PAQR4Q8N4S7 273 aaPredicted RBP8.39□□□□□ -1.07
PHGDH-215ENST00000641371 WDR31Q8NA23 367 aa8.39□□□□□ -1.07
PHGDH-215ENST00000641371 SPERTQ8NA61 448 aa8.39□□□□□ -1.07
PHGDH-215ENST00000641371 CHST4Q8NCG5 386 aa8.39□□□□□ -1.07
PHGDH-215ENST00000641371 OR51T1Q8NGJ9 327 aa8.39□□□□□ -1.07
PHGDH-215ENST00000641371 C1orf147Q96MC9 270 aaPredicted RBP8.39□□□□□ -1.07
PHGDH-215ENST00000641371 GAL3ST1Q99999 423 aa8.39□□□□□ -1.07
PHGDH-215ENST00000641371 MICU1Q9BPX6 476 aa8.39□□□□□ -1.07
PHGDH-215ENST00000641371 HRASLSQ9HDD0 168 aa8.39□□□□□ -1.07
PHGDH-215ENST00000641371 IFT46Q9NQC8 304 aa8.39□□□□□ -1.07
PHGDH-215ENST00000641371 PTTG3PQ9NZH4 202 aa8.39□□□□□ -1.07
PHGDH-215ENST00000641371 NLKQ9UBE8 527 aa8.39□□□□□ -1.07
PHGDH-215ENST00000641371 HSF4Q9ULV5 492 aa8.39□□□□□ -1.07
PHGDH-215ENST00000641371 PLEKHA6Q9Y2H5 1048 aa8.39□□□□□ -1.07
PHGDH-215ENST00000641371 STARD10Q9Y365 291 aa8.39□□□□□ -1.07
PHGDH-215ENST00000641371 DCHS1Q96JQ0 3298 aa8.39□□□□□ -1.07
PHGDH-215ENST00000641371 FAM230AA0A1W2PPH8 454 aa8.38□□□□□ -1.07
PHGDH-215ENST00000641371 PQLC2LA1A4F0 135 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms