RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 PAQR6Q6TCH4 344 aa15.3■□□□□ 0.04
CACNA1A-253ENST00000637927 C16orf47Q6ZP98 133 aaPredicted RBP15.3■□□□□ 0.04
CACNA1A-253ENST00000637927 BCL7CQ8WUZ0 217 aaPredicted RBP15.3■□□□□ 0.04
CACNA1A-253ENST00000637927 BMI1P35226 326 aa15.3■□□□□ 0.04
CACNA1A-253ENST00000637927 PPOXP50336 477 aa15.3■□□□□ 0.04
CACNA1A-253ENST00000637927 GUCA2AQ02747 115 aa15.3■□□□□ 0.04
CACNA1A-253ENST00000637927 DUSP6Q16828 381 aa15.3■□□□□ 0.04
CACNA1A-253ENST00000637927 MS4A6EQ96DS6 147 aa15.3■□□□□ 0.04
CACNA1A-253ENST00000637927 A0A1W2PRX2 142 aa15.3■□□□□ 0.04
CACNA1A-253ENST00000637927 ZNF137PP52743 207 aa15.3■□□□□ 0.04
CACNA1A-253ENST00000637927 EMP1P54849 157 aa15.3■□□□□ 0.04
CACNA1A-253ENST00000637927 TMEM37Q8WXS4 190 aa15.3■□□□□ 0.04
CACNA1A-253ENST00000637927 WDR89Q96FK6 387 aaPredicted RBP15.3■□□□□ 0.04
CACNA1A-253ENST00000637927 NKX6-2Q9C056 277 aaPredicted RBP15.3■□□□□ 0.04
CACNA1A-253ENST00000637927 SPINK14Q6IE38 97 aa15.29■□□□□ 0.04
CACNA1A-253ENST00000637927 Q6ZSR9 355 aa15.29■□□□□ 0.04
CACNA1A-253ENST00000637927 FAM219AQ8IW50 185 aa15.29■□□□□ 0.04
CACNA1A-253ENST00000637927 MARCH1Q8TCQ1 289 aa15.29■□□□□ 0.04
CACNA1A-253ENST00000637927 OPALINQ96PE5 141 aa15.29■□□□□ 0.04
CACNA1A-253ENST00000637927 PSORS1C1Q9UIG5 152 aa15.29■□□□□ 0.04
CACNA1A-253ENST00000637927 LSM2Q9Y333 95 aaKnown RBP15.29■□□□□ 0.04
CACNA1A-253ENST00000637927 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.29■□□□□ 0.04
CACNA1A-253ENST00000637927 HPP00738 406 aa15.29■□□□□ 0.04
CACNA1A-253ENST00000637927 NCR3LG1Q68D85 454 aa15.29■□□□□ 0.04
CACNA1A-253ENST00000637927 SLC38A6Q8IZM9 456 aa15.29■□□□□ 0.04
CACNA1A-253ENST00000637927 ZCCHC14Q8WYQ9 949 aaKnown RBP15.29■□□□□ 0.04
CACNA1A-253ENST00000637927 MRAP2Q96G30 205 aa15.29■□□□□ 0.04
CACNA1A-253ENST00000637927 PDLIM5Q96HC4 596 aaKnown RBP15.29■□□□□ 0.04
CACNA1A-253ENST00000637927 TMUB1Q9BVT8 246 aa15.29■□□□□ 0.04
CACNA1A-253ENST00000637927 TEX50A0A1B0GTY4 177 aa15.29■□□□□ 0.04
CACNA1A-253ENST00000637927 ZGLP1P0C6A0 271 aa15.29■□□□□ 0.04
CACNA1A-253ENST00000637927 TCTN3Q6NUS6 607 aa15.29■□□□□ 0.04
CACNA1A-253ENST00000637927 C5orf17Q8NAS9 161 aa15.29■□□□□ 0.04
CACNA1A-253ENST00000637927 ASCC3Q8N3C0 2202 aaKnown RBP15.29■□□□□ 0.04
CACNA1A-253ENST00000637927 TRGV5A0A0B4J1U4 118 aa15.29■□□□□ 0.04
CACNA1A-253ENST00000637927 SYT5O00445 386 aa15.29■□□□□ 0.04
CACNA1A-253ENST00000637927 OR4A8P0C604 315 aa15.29■□□□□ 0.04
CACNA1A-253ENST00000637927 GRINAQ7Z429 371 aa15.29■□□□□ 0.04
CACNA1A-253ENST00000637927 CRYGNQ8WXF5 182 aa15.29■□□□□ 0.04
CACNA1A-253ENST00000637927 C19orf43Q9BQ61 176 aa15.29■□□□□ 0.04
CACNA1A-253ENST00000637927 PRR13Q9NZ81 148 aa15.29■□□□□ 0.04
CACNA1A-253ENST00000637927 ADAM10O14672 748 aa15.29■□□□□ 0.04
CACNA1A-253ENST00000637927 CD14P08571 375 aa15.29■□□□□ 0.04
CACNA1A-253ENST00000637927 CST5P28325 142 aaPredicted RBP15.29■□□□□ 0.04
CACNA1A-253ENST00000637927 ERVS71-1P61550 626 aa15.29■□□□□ 0.04
CACNA1A-253ENST00000637927 KLRB1Q12918 225 aa15.29■□□□□ 0.04
CACNA1A-253ENST00000637927 LY6EQ16553 131 aa15.29■□□□□ 0.04
CACNA1A-253ENST00000637927 RELAQ04206 551 aa15.29■□□□□ 0.04
CACNA1A-253ENST00000637927 NSUN5P2Q63ZY6 315 aa15.29■□□□□ 0.04
CACNA1A-253ENST00000637927 HMGN4O00479 90 aa15.28■□□□□ 0.04
CACNA1A-253ENST00000637927 ARG1P05089 322 aa15.28■□□□□ 0.04
CACNA1A-253ENST00000637927 GGTA1PQ4G0N0 100 aa15.28■□□□□ 0.04
CACNA1A-253ENST00000637927 TOMM20LQ6UXN7 152 aa15.28■□□□□ 0.04
CACNA1A-253ENST00000637927 OR52I2Q8NH67 350 aa15.28■□□□□ 0.04
CACNA1A-253ENST00000637927 MARC2Q969Z3 335 aa15.28■□□□□ 0.04
CACNA1A-253ENST00000637927 SARAFQ96BY9 339 aa15.28■□□□□ 0.04
CACNA1A-253ENST00000637927 APOBEC1P41238 236 aaKnown RBP15.28■□□□□ 0.04
CACNA1A-253ENST00000637927 LGALS7P47929 136 aa15.28■□□□□ 0.04
CACNA1A-253ENST00000637927 GDPGP1Q6ZNW5 385 aa15.28■□□□□ 0.04
CACNA1A-253ENST00000637927 OR5AP2Q8NGF4 316 aa15.28■□□□□ 0.04
CACNA1A-253ENST00000637927 POLDIP2Q9Y2S7 368 aa15.28■□□□□ 0.04
CACNA1A-253ENST00000637927 PLRG1O43660 514 aaKnown RBP15.28■□□□□ 0.04
CACNA1A-253ENST00000637927 SNX22Q96L94 193 aa15.28■□□□□ 0.04
CACNA1A-253ENST00000637927 ZNF416Q9BWM5 594 aa15.28■□□□□ 0.04
CACNA1A-253ENST00000637927 C11orf54Q9H0W9 315 aaPredicted RBP15.28■□□□□ 0.04
CACNA1A-253ENST00000637927 VSIG4Q9Y279 399 aa15.28■□□□□ 0.04
CACNA1A-253ENST00000637927 TBL2Q9Y4P3 447 aaKnown RBP15.28■□□□□ 0.04
CACNA1A-253ENST00000637927 TMIGD3P0DMS9 266 aaPredicted RBP15.28■□□□□ 0.04
CACNA1A-253ENST00000637927 SRSF9Q13242 221 aaKnown RBP eCLIP15.28■□□□□ 0.04
CACNA1A-253ENST00000637927 VAMP8Q9BV40 100 aa15.28■□□□□ 0.04
CACNA1A-253ENST00000637927 TCRBP04435 133 aa15.28■□□□□ 0.04
CACNA1A-253ENST00000637927 HIST1H3AP68431 136 aa15.28■□□□□ 0.04
CACNA1A-253ENST00000637927 TNFAIP6P98066 277 aaPredicted RBP15.28■□□□□ 0.04
CACNA1A-253ENST00000637927 GCSAMLQ5JQS6 135 aa15.28■□□□□ 0.04
CACNA1A-253ENST00000637927 TRAT1Q6PIZ9 186 aa15.28■□□□□ 0.04
CACNA1A-253ENST00000637927 OR13C8Q8NGS7 320 aa15.28■□□□□ 0.04
CACNA1A-253ENST00000637927 MRGPRDQ8TDS7 321 aa15.28■□□□□ 0.04
CACNA1A-253ENST00000637927 RASL11BQ9BPW5 248 aa15.28■□□□□ 0.04
CACNA1A-253ENST00000637927 ZMIZ1Q9ULJ6 1067 aa15.28■□□□□ 0.04
CACNA1A-253ENST00000637927 C4AP0C0L4 1744 aa15.27■□□□□ 0.04
CACNA1A-253ENST00000637927 HLA-GP17693 338 aa15.27■□□□□ 0.04
CACNA1A-253ENST00000637927 MEGF10Q96KG7 1140 aa15.27■□□□□ 0.04
CACNA1A-253ENST00000637927 M0R296 226 aa15.27■□□□□ 0.04
CACNA1A-253ENST00000637927 ST8SIA5O15466 376 aa15.27■□□□□ 0.04
CACNA1A-253ENST00000637927 SNRPGP62308 76 aaKnown RBP15.27■□□□□ 0.04
CACNA1A-253ENST00000637927 OR1N2Q8NGR9 330 aa15.27■□□□□ 0.04
CACNA1A-253ENST00000637927 ZPBPQ9BS86 351 aa15.27■□□□□ 0.04
CACNA1A-253ENST00000637927 SLC26A1Q9H2B4 701 aa15.27■□□□□ 0.04
CACNA1A-253ENST00000637927 MMP25Q9NPA2 562 aa15.27■□□□□ 0.04
CACNA1A-253ENST00000637927 YTHDF2Q9Y5A9 579 aaKnown RBP15.27■□□□□ 0.04
CACNA1A-253ENST00000637927 A0A1B0GV72 72 aa15.27■□□□□ 0.04
CACNA1A-253ENST00000637927 SLC38A9Q8NBW4 561 aa15.27■□□□□ 0.04
CACNA1A-253ENST00000637927 OR4C3Q8NH37 302 aa15.27■□□□□ 0.04
CACNA1A-253ENST00000637927 CLDN23Q96B33 292 aa15.27■□□□□ 0.04
CACNA1A-253ENST00000637927 P2RX4Q99571 388 aa15.27■□□□□ 0.04
CACNA1A-253ENST00000637927 UBQLN3Q9H347 655 aa15.27■□□□□ 0.04
CACNA1A-253ENST00000637927 A0A1W2PPE3 182 aa15.27■□□□□ 0.03
CACNA1A-253ENST00000637927 CTSLP07711 333 aa15.27■□□□□ 0.03
CACNA1A-253ENST00000637927 RPL30P62888 115 aaKnown RBP15.27■□□□□ 0.03
CACNA1A-253ENST00000637927 SSX1Q16384 188 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms