RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 ASCL1P50553 236 aa13.05□□□□□ -0.32
VPS36-207ENST00000611132 SURF2Q15527 256 aaPredicted RBP13.05□□□□□ -0.32
VPS36-207ENST00000611132 FAM174AQ8TBP5 190 aa13.05□□□□□ -0.32
VPS36-207ENST00000611132 HINT2Q9BX68 163 aa13.05□□□□□ -0.32
VPS36-207ENST00000611132 MRPS18BQ9Y676 258 aaKnown RBP13.05□□□□□ -0.32
VPS36-207ENST00000611132 PQLC2LA1A4F0 135 aa13.05□□□□□ -0.32
VPS36-207ENST00000611132 CLDN34H7C241 214 aa13.05□□□□□ -0.32
VPS36-207ENST00000611132 BCKDHBP21953 392 aa13.05□□□□□ -0.32
VPS36-207ENST00000611132 THBS4P35443 961 aa13.05□□□□□ -0.32
VPS36-207ENST00000611132 OR51F2Q8NH61 342 aa13.05□□□□□ -0.32
VPS36-207ENST00000611132 FBXO17Q96EF6 278 aa13.05□□□□□ -0.32
VPS36-207ENST00000611132 TMED3Q9Y3Q3 217 aa13.05□□□□□ -0.32
VPS36-207ENST00000611132 MDFIC2A0A1B0GVS7 189 aa13.05□□□□□ -0.32
VPS36-207ENST00000611132 RNF212BA8MTL3 300 aa13.05□□□□□ -0.32
VPS36-207ENST00000611132 SOCS1O15524 211 aa13.05□□□□□ -0.32
VPS36-207ENST00000611132 CAPZBP47756 277 aa13.05□□□□□ -0.32
VPS36-207ENST00000611132 BAXQ07812 192 aa13.05□□□□□ -0.32
VPS36-207ENST00000611132 MAML2Q8IZL2 1156 aaPredicted RBP13.05□□□□□ -0.32
VPS36-207ENST00000611132 TMEM52Q8NDY8 209 aa13.05□□□□□ -0.32
VPS36-207ENST00000611132 KCNE5Q9UJ90 142 aa13.05□□□□□ -0.32
VPS36-207ENST00000611132 LAMP3Q9UQV4 416 aa13.05□□□□□ -0.32
VPS36-207ENST00000611132 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.05□□□□□ -0.32
VPS36-207ENST00000611132 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.05□□□□□ -0.32
VPS36-207ENST00000611132 C4orf51C9J302 202 aa13.05□□□□□ -0.32
VPS36-207ENST00000611132 VSIG8P0DPA2 414 aa13.05□□□□□ -0.32
VPS36-207ENST00000611132 CDAP32320 146 aa13.05□□□□□ -0.32
VPS36-207ENST00000611132 EFNB1P98172 346 aa13.05□□□□□ -0.32
VPS36-207ENST00000611132 PDLIM3Q53GG5 364 aaPredicted RBP13.05□□□□□ -0.32
VPS36-207ENST00000611132 DRAM2Q6UX65 266 aa13.05□□□□□ -0.32
VPS36-207ENST00000611132 RGP1Q92546 391 aaPredicted RBP13.05□□□□□ -0.32
VPS36-207ENST00000611132 B4GALT7Q9UBV7 327 aa13.05□□□□□ -0.32
VPS36-207ENST00000611132 GREB1Q4ZG55 1949 aa13.04□□□□□ -0.32
VPS36-207ENST00000611132 TRBV5-7A0A0A0MS05 114 aa13.04□□□□□ -0.32
VPS36-207ENST00000611132 PDGFBP01127 241 aaPredicted RBP13.04□□□□□ -0.32
VPS36-207ENST00000611132 CTXN2P0C2S0 81 aa13.04□□□□□ -0.32
VPS36-207ENST00000611132 NOVA1P51513 510 aaKnown RBP13.04□□□□□ -0.32
VPS36-207ENST00000611132 OR8G2PQ6IF36 304 aa13.04□□□□□ -0.32
VPS36-207ENST00000611132 PARM1Q6UWI2 310 aa13.04□□□□□ -0.32
VPS36-207ENST00000611132 RPUSD4Q96CM3 377 aaKnown RBP13.04□□□□□ -0.32
VPS36-207ENST00000611132 MVB12AQ96EY5 273 aa13.04□□□□□ -0.32
VPS36-207ENST00000611132 FAM210BQ96KR6 192 aa13.04□□□□□ -0.32
VPS36-207ENST00000611132 AP1S3Q96PC3 154 aa13.04□□□□□ -0.32
VPS36-207ENST00000611132 ATG2BQ96BY7 2078 aa13.04□□□□□ -0.32
VPS36-207ENST00000611132 MYOFQ9NZM1 2061 aa13.04□□□□□ -0.32
VPS36-207ENST00000611132 PLPP3O14495 311 aa13.04□□□□□ -0.32
VPS36-207ENST00000611132 EIF3GO75821 320 aaKnown RBP eCLIP13.04□□□□□ -0.32
VPS36-207ENST00000611132 IL13RA2Q14627 380 aa13.04□□□□□ -0.32
VPS36-207ENST00000611132 FAM185AQ8N0U4 392 aa13.04□□□□□ -0.32
VPS36-207ENST00000611132 OXGR1Q96P68 337 aa13.04□□□□□ -0.32
VPS36-207ENST00000611132 ALG1L2C9J202 215 aa13.04□□□□□ -0.32
VPS36-207ENST00000611132 C17orf112F2Z3M2 114 aa13.04□□□□□ -0.32
VPS36-207ENST00000611132 HRKO00198 91 aa13.04□□□□□ -0.32
VPS36-207ENST00000611132 CD8AP01732 235 aa13.04□□□□□ -0.32
VPS36-207ENST00000611132 FKBP2P26885 142 aaKnown RBP13.04□□□□□ -0.32
VPS36-207ENST00000611132 RAB30Q15771 203 aa13.04□□□□□ -0.32
VPS36-207ENST00000611132 C2orf68Q2NKX9 166 aa13.04□□□□□ -0.32
VPS36-207ENST00000611132 ZNF528Q3MIS6 628 aa13.04□□□□□ -0.32
VPS36-207ENST00000611132 NCR3LG1Q68D85 454 aa13.04□□□□□ -0.32
VPS36-207ENST00000611132 DHRS7BQ6IAN0 325 aaPredicted RBP13.04□□□□□ -0.32
VPS36-207ENST00000611132 LIN37Q96GY3 246 aaPredicted RBP13.04□□□□□ -0.32
VPS36-207ENST00000611132 ANGPTL7O43827 346 aa13.03□□□□□ -0.32
VPS36-207ENST00000611132 TCN2P20062 427 aa13.03□□□□□ -0.32
VPS36-207ENST00000611132 SRYQ05066 204 aa13.03□□□□□ -0.32
VPS36-207ENST00000611132 FOXF1Q12946 379 aa13.03□□□□□ -0.32
VPS36-207ENST00000611132 SHBQ15464 509 aa13.03□□□□□ -0.32
VPS36-207ENST00000611132 FAM219AQ8IW50 185 aa13.03□□□□□ -0.32
VPS36-207ENST00000611132 SFTPA1Q8IWL2 248 aa13.03□□□□□ -0.32
VPS36-207ENST00000611132 ZNF611Q8N823 705 aa13.03□□□□□ -0.32
VPS36-207ENST00000611132 OIT3Q8WWZ8 545 aa13.03□□□□□ -0.32
VPS36-207ENST00000611132 RBFOX3A6NFN3 312 aa13.03□□□□□ -0.32
VPS36-207ENST00000611132 VAMP5O95183 116 aa13.03□□□□□ -0.32
VPS36-207ENST00000611132 SULT1A2P50226 295 aa13.03□□□□□ -0.32
VPS36-207ENST00000611132 BATF2Q8N1L9 274 aa13.03□□□□□ -0.32
VPS36-207ENST00000611132 MRGPRX1Q96LB2 322 aa13.03□□□□□ -0.32
VPS36-207ENST00000611132 OR51M1Q9H341 326 aa13.03□□□□□ -0.32
VPS36-207ENST00000611132 NAA60Q9H7X0 242 aa13.03□□□□□ -0.32
VPS36-207ENST00000611132 CD207Q9UJ71 328 aa13.03□□□□□ -0.32
VPS36-207ENST00000611132 TRAPPC2LQ9UL33 140 aa13.03□□□□□ -0.32
VPS36-207ENST00000611132 YBX2Q9Y2T7 364 aaKnown RBP13.03□□□□□ -0.32
VPS36-207ENST00000611132 A0A1W2PPQ1 181 aa13.03□□□□□ -0.32
VPS36-207ENST00000611132 EFSO43281 561 aa13.03□□□□□ -0.32
VPS36-207ENST00000611132 LY86O95711 162 aa13.03□□□□□ -0.32
VPS36-207ENST00000611132 BRCA1P38398 1863 aaKnown RBP13.03□□□□□ -0.32
VPS36-207ENST00000611132 B2MP61769 119 aa13.03□□□□□ -0.32
VPS36-207ENST00000611132 RPP30P78346 268 aaKnown RBP13.03□□□□□ -0.32
VPS36-207ENST00000611132 BAGE3Q86Y29 109 aa13.03□□□□□ -0.32
VPS36-207ENST00000611132 BAGE2Q86Y30 109 aa13.03□□□□□ -0.32
VPS36-207ENST00000611132 OR2C3Q8N628 320 aa13.03□□□□□ -0.32
VPS36-207ENST00000611132 MRGPRX4Q96LA9 322 aa13.03□□□□□ -0.32
VPS36-207ENST00000611132 GPX7Q96SL4 187 aaPredicted RBP13.03□□□□□ -0.32
VPS36-207ENST00000611132 SARGQ9BW04 601 aa13.03□□□□□ -0.32
VPS36-207ENST00000611132 GCM1Q9NP62 436 aa13.03□□□□□ -0.32
VPS36-207ENST00000611132 ST3GAL6Q9Y274 331 aa13.03□□□□□ -0.32
VPS36-207ENST00000611132 DOCK4Q8N1I0 1966 aa13.03□□□□□ -0.32
VPS36-207ENST00000611132 CTSDP07339 412 aaPredicted RBP13.03□□□□□ -0.32
VPS36-207ENST00000611132 NGFRP08138 427 aa13.03□□□□□ -0.32
VPS36-207ENST00000611132 RCC1P18754 421 aaPredicted RBP13.03□□□□□ -0.32
VPS36-207ENST00000611132 RPS4Y1P22090 263 aaKnown RBP13.03□□□□□ -0.32
VPS36-207ENST00000611132 IL2RGP31785 369 aa13.03□□□□□ -0.32
VPS36-207ENST00000611132 CATR1Q13166 79 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms