RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 RPS5P46782 204 aaKnown RBP2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 ATP5J2P56134 94 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 RGS8P57771 180 aaPredicted RBP2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 PRPS1P60891 318 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 DMTNQ08495 405 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 ZP4Q12836 540 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 BNIP2Q12982 314 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 ATRQ13535 2644 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 CYLC2Q14093 348 aaPredicted RBP2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 MAPRE2Q15555 327 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 OR1Q1Q15612 314 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 OR7A5Q15622 319 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 DUSP7Q16829 419 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 PGGHGQ32M88 737 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 TRMT5Q32P41 509 aaKnown RBP2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 MS4A18Q3C1V0 323 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 AGAP6Q5VW22 663 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 C11orf71Q6IPW1 123 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 NANOGP8Q6NSW7 305 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 ERICH5Q6P6B1 374 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 CASP12Q6UXS9 341 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 AAED1Q7RTV5 226 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 COX8CQ7Z4L0 72 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 DHDDSQ86SQ9 333 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 COMTD1Q86VU5 262 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 RANBP3LQ86VV4 465 aaPredicted RBP2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 CALHM3Q86XJ0 350 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 UBE2J2Q8N2K1 259 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 GPR32P1Q8NGA4 272 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 OR8J3Q8NGG0 315 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 OR52E4Q8NGH9 312 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 OR1K1Q8NGR3 316 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 LIPHQ8WWY8 451 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 RASL10AQ92737 203 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 INTS14Q96SY0 518 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 ARHGDIGQ99819 225 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 DHRS9Q9BPW9 319 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 SLC19A3Q9BZV2 496 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 POLR2J2Q9GZM3 115 aaKnown RBP2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 POLR2J3Q9H1A7 115 aaKnown RBP2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 NANOGQ9H9S0 305 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 TMEM27Q9HBJ8 222 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 GPN1Q9HCN4 374 aaPredicted RBP2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 MED4Q9NPJ6 270 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 RPS10P5Q9NQ39 176 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 CBLN4Q9NTU7 201 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 ZNF446Q9NWS9 450 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 MRPL39Q9NYK5 338 aaKnown RBP2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 RPS6KB2Q9UBS0 482 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 ANGPT4Q9Y264 503 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 AP3M1Q9Y2T2 418 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 WNK2Q9Y3S1 2297 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 COL6A5A8TX70 2615 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 MXRA5Q9NR99 2828 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 A0A0G2JND7 137 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 TRAPPC13A5PLN9 417 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 ZNF99A8MXY4 864 aaPredicted RBP2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 CENPBD1B2RD01 187 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 E5RGE8 158 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 E7EQL1 145 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 PLPP3O14495 311 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 CLOCKO15516 846 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 UPK3AO75631 287 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 LYPD3O95274 346 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 LY6G6DO95868 133 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 IFNA14P01570 189 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 IGHV3-13P01766 116 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 IGHV3-9P01782 118 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 BGLAPP02818 100 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 MT-ND2P03891 347 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 THY1P04216 161 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 TSPAN19P0C672 248 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 ASAH2BP0C7U1 165 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 THRBP10828 461 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 CBR1P16152 277 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 GTF2E2P29084 291 aaKnown RBP2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 GRPRP30550 384 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 CAPGP40121 348 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 RBM34P42696 430 aaKnown RBP2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 ZNF83P51522 516 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 ZNF133P52736 654 aaPredicted RBP2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 CRYBA2P53672 197 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 MTPNP58546 118 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 ERVK-16P61578 105 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 NCALDP61601 193 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 HOXC5Q00444 222 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 COX10Q12887 443 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 SELPLGQ14242 412 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 CYP51A1Q16850 503 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 TCTEX1D4Q5JR98 221 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 CGB2Q6NT52 195 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 NIPAL3Q6P499 406 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 B3GLCTQ6Y288 498 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 ARPINQ7Z6K5 226 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 SNX32Q86XE0 403 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 C20orf196Q8IYI0 205 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 TMEM123Q8N131 208 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 ABHD12Q8N2K0 398 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 MUC15Q8N387 334 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 SMYD1Q8NB12 490 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms