RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 VSIG8P0DPA2 414 aa15.2■□□□□ 0.02
SHKBP1-224ENST00000600718 PTH2RP49190 550 aa15.2■□□□□ 0.02
SHKBP1-224ENST00000600718 ARPC4P59998 168 aa15.2■□□□□ 0.02
SHKBP1-224ENST00000600718 PLCXD3Q63HM9 321 aa15.2■□□□□ 0.02
SHKBP1-224ENST00000600718 CRIP3Q6Q6R5 217 aa15.2■□□□□ 0.02
SHKBP1-224ENST00000600718 RELL2Q8NC24 303 aaPredicted RBP15.2■□□□□ 0.02
SHKBP1-224ENST00000600718 BORCS8Q96FH0 119 aa15.2■□□□□ 0.02
SHKBP1-224ENST00000600718 ACTR6Q9GZN1 396 aa15.2■□□□□ 0.02
SHKBP1-224ENST00000600718 INTS1Q8N201 2190 aaKnown RBP15.19■□□□□ 0.02
SHKBP1-224ENST00000600718 BOD1L1Q8NFC6 3051 aa15.19■□□□□ 0.02
SHKBP1-224ENST00000600718 METTL21EPA6NDL7 271 aa15.19■□□□□ 0.02
SHKBP1-224ENST00000600718 ZNF850A8MQ14 1090 aa15.19■□□□□ 0.02
SHKBP1-224ENST00000600718 TMEM14DPA8MWL7 114 aa15.19■□□□□ 0.02
SHKBP1-224ENST00000600718 TPD52L2O43399 206 aaKnown RBP15.19■□□□□ 0.02
SHKBP1-224ENST00000600718 GSTZ1O43708 216 aaPredicted RBP15.19■□□□□ 0.02
SHKBP1-224ENST00000600718 FAM157BP0CG42 384 aa15.19■□□□□ 0.02
SHKBP1-224ENST00000600718 TRAPPC2P0DI81 140 aa15.19■□□□□ 0.02
SHKBP1-224ENST00000600718 TRAPPC2BP0DI82 140 aa15.19■□□□□ 0.02
SHKBP1-224ENST00000600718 NAT2P11245 290 aa15.19■□□□□ 0.02
SHKBP1-224ENST00000600718 RAD52P43351 418 aa15.19■□□□□ 0.02
SHKBP1-224ENST00000600718 RBP2P50120 134 aa15.19■□□□□ 0.02
SHKBP1-224ENST00000600718 TAS2R20P59543 309 aa15.19■□□□□ 0.02
SHKBP1-224ENST00000600718 MRPS10P82664 201 aaKnown RBP15.19■□□□□ 0.02
SHKBP1-224ENST00000600718 PPA1Q15181 289 aa15.19■□□□□ 0.02
SHKBP1-224ENST00000600718 HACD4Q5VWC8 232 aa15.19■□□□□ 0.02
SHKBP1-224ENST00000600718 OR10K2Q6IF99 312 aa15.19■□□□□ 0.02
SHKBP1-224ENST00000600718 PCSK4Q6UW60 755 aa15.19■□□□□ 0.02
SHKBP1-224ENST00000600718 C1orf174Q8IYL3 243 aa15.19■□□□□ 0.02
SHKBP1-224ENST00000600718 KCNG3Q8TAE7 436 aa15.19■□□□□ 0.02
SHKBP1-224ENST00000600718 RFT1Q96AA3 541 aa15.19■□□□□ 0.02
SHKBP1-224ENST00000600718 MYEF2Q9P2K5 600 aaKnown RBP15.19■□□□□ 0.02
SHKBP1-224ENST00000600718 FAM230AA0A1W2PPH8 454 aa15.18■□□□□ 0.02
SHKBP1-224ENST00000600718 C16orf97H3BN30 126 aa15.18■□□□□ 0.02
SHKBP1-224ENST00000600718 ATP1B3P54709 279 aa15.18■□□□□ 0.02
SHKBP1-224ENST00000600718 CDK10Q15131 360 aa15.18■□□□□ 0.02
SHKBP1-224ENST00000600718 BIVMQ86UB2 503 aa15.18■□□□□ 0.02
SHKBP1-224ENST00000600718 OR1J1Q8NGS3 322 aa15.18■□□□□ 0.02
SHKBP1-224ENST00000600718 TNFAIP8L1Q8WVP5 186 aa15.18■□□□□ 0.02
SHKBP1-224ENST00000600718 C1orf147Q96MC9 270 aaPredicted RBP15.18■□□□□ 0.02
SHKBP1-224ENST00000600718 PAPOLGQ9BWT3 736 aaKnown RBP15.18■□□□□ 0.02
SHKBP1-224ENST00000600718 OR10A4Q9H209 315 aa15.18■□□□□ 0.02
SHKBP1-224ENST00000600718 TBC1D24Q9ULP9 559 aa15.18■□□□□ 0.02
SHKBP1-224ENST00000600718 ING4Q9UNL4 249 aa15.18■□□□□ 0.02
SHKBP1-224ENST00000600718 OSGIN2Q9Y236 505 aa15.18■□□□□ 0.02
SHKBP1-224ENST00000600718 RAC2P15153 192 aa15.18■□□□□ 0.02
SHKBP1-224ENST00000600718 INPP1P49441 399 aa15.18■□□□□ 0.02
SHKBP1-224ENST00000600718 PRDX4Q13162 271 aa15.18■□□□□ 0.02
SHKBP1-224ENST00000600718 UNC119Q13432 240 aa15.18■□□□□ 0.02
SHKBP1-224ENST00000600718 TAB1Q15750 504 aa15.18■□□□□ 0.02
SHKBP1-224ENST00000600718 FAM189A2Q15884 450 aa15.18■□□□□ 0.02
SHKBP1-224ENST00000600718 CMBLQ96DG6 245 aa15.18■□□□□ 0.02
SHKBP1-224ENST00000600718 S100A13Q99584 98 aa15.18■□□□□ 0.02
SHKBP1-224ENST00000600718 OR2J1Q9GZK6 312 aa15.18■□□□□ 0.02
SHKBP1-224ENST00000600718 IGHV2OR16-5A0A0B4J2B6 119 aa15.17■□□□□ 0.02
SHKBP1-224ENST00000600718 ANKRD30BLA7E2S9 258 aa15.17■□□□□ 0.02
SHKBP1-224ENST00000600718 CENPXA8MT69 81 aa15.17■□□□□ 0.02
SHKBP1-224ENST00000600718 SCGNO76038 276 aa15.17■□□□□ 0.02
SHKBP1-224ENST00000600718 ZNF83P51522 516 aa15.17■□□□□ 0.02
SHKBP1-224ENST00000600718 ASAH1Q13510 395 aa15.17■□□□□ 0.02
SHKBP1-224ENST00000600718 ZFP69Q49AA0 526 aa15.17■□□□□ 0.02
SHKBP1-224ENST00000600718 SPATA46Q5T0L3 261 aa15.17■□□□□ 0.02
SHKBP1-224ENST00000600718 RAB12Q6IQ22 244 aa15.17■□□□□ 0.02
SHKBP1-224ENST00000600718 ZDHHC23Q8IYP9 409 aa15.17■□□□□ 0.02
SHKBP1-224ENST00000600718 SLC25A40Q8TBP6 338 aa15.17■□□□□ 0.02
SHKBP1-224ENST00000600718 SMIM4Q8WVI0 70 aa15.17■□□□□ 0.02
SHKBP1-224ENST00000600718 FAM46BQ96A09 425 aa15.17■□□□□ 0.02
SHKBP1-224ENST00000600718 BCL2L14Q9BZR8 327 aa15.17■□□□□ 0.02
SHKBP1-224ENST00000600718 GPR160Q9UJ42 338 aa15.17■□□□□ 0.02
SHKBP1-224ENST00000600718 MPC1Q9Y5U8 109 aa15.17■□□□□ 0.02
SHKBP1-224ENST00000600718 PRRC2CQ9Y520 2896 aaKnown RBP15.17■□□□□ 0.02
SHKBP1-224ENST00000600718 TRAV18A0A075B6X5 111 aa15.16■□□□□ 0.02
SHKBP1-224ENST00000600718 GABARAPH6UMI1 98 aa15.16■□□□□ 0.02
SHKBP1-224ENST00000600718 SELEP16581 610 aa15.16■□□□□ 0.02
SHKBP1-224ENST00000600718 ZP1P60852 638 aa15.16■□□□□ 0.02
SHKBP1-224ENST00000600718 NAAAQ02083 359 aa15.16■□□□□ 0.02
SHKBP1-224ENST00000600718 CEACAM21Q3KPI0 293 aa15.16■□□□□ 0.02
SHKBP1-224ENST00000600718 OR2T2Q6IF00 324 aa15.16■□□□□ 0.02
SHKBP1-224ENST00000600718 SSX8Q7RTT4 187 aa15.16■□□□□ 0.02
SHKBP1-224ENST00000600718 CDH24Q86UP0 819 aa15.16■□□□□ 0.02
SHKBP1-224ENST00000600718 OR5D18Q8NGL1 313 aa15.16■□□□□ 0.02
SHKBP1-224ENST00000600718 TRIM63Q969Q1 353 aa15.16■□□□□ 0.02
SHKBP1-224ENST00000600718 CCDC120Q96HB5 630 aa15.16■□□□□ 0.02
SHKBP1-224ENST00000600718 HIST1H2AAQ96QV6 131 aa15.16■□□□□ 0.02
SHKBP1-224ENST00000600718 CST11Q9H112 138 aa15.16■□□□□ 0.02
SHKBP1-224ENST00000600718 PIEZO2Q9H5I5 2752 aa15.16■□□□□ 0.02
SHKBP1-224ENST00000600718 SPENQ96T58 3664 aaKnown RBP15.16■□□□□ 0.02
SHKBP1-224ENST00000600718 IGKV1-27A0A075B6S5 117 aa15.16■□□□□ 0.02
SHKBP1-224ENST00000600718 CCL21O00585 134 aa15.16■□□□□ 0.02
SHKBP1-224ENST00000600718 KDM4BO94953 1096 aa15.16■□□□□ 0.02
SHKBP1-224ENST00000600718 TMEM225BP0DP42 221 aa15.16■□□□□ 0.02
SHKBP1-224ENST00000600718 MRPS15P82914 257 aaKnown RBP15.16■□□□□ 0.02
SHKBP1-224ENST00000600718 DGCR2P98153 550 aa15.16■□□□□ 0.02
SHKBP1-224ENST00000600718 C1QL2Q7Z5L3 287 aa15.16■□□□□ 0.02
SHKBP1-224ENST00000600718 OR5A2Q8NGI9 324 aa15.16■□□□□ 0.02
SHKBP1-224ENST00000600718 FCAMRQ8WWV6 532 aa15.16■□□□□ 0.02
SHKBP1-224ENST00000600718 YIPF5Q969M3 257 aa15.16■□□□□ 0.02
SHKBP1-224ENST00000600718 ST6GAL2Q96JF0 529 aa15.16■□□□□ 0.02
SHKBP1-224ENST00000600718 SLA2Q9H6Q3 261 aa15.16■□□□□ 0.02
SHKBP1-224ENST00000600718 ZGRF1Q86YA3 2104 aa15.16■□□□□ 0.02
SHKBP1-224ENST00000600718 BSNQ9UPA5 3926 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms