RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 LOC100509620A0A075B734 347 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 NPIPA5A0A0B4J1W7 369 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 TRBC2A0A5B9 178 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 NKX2-6A6NCS4 301 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 OR5B21A6NL26 309 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 FTCDNL1E5RQL4 147 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 NPIPA5E9PKD4 350 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 F5H5T6 163 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 NPIPA3F8WFD2 350 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 CLDN34H7C241 214 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 J3QR06 171 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 XKRYO14609 159 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 AGPAT2O15120 278 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 RBFOX2O43251 390 aaKnown RBP eCLIP5.37□□□□□ -1.55
SMAD4-203ENST00000585448 TLX2O43763 284 aaPredicted RBP5.37□□□□□ -1.55
SMAD4-203ENST00000585448 ZNF354AO60765 605 aaPredicted RBP5.37□□□□□ -1.55
SMAD4-203ENST00000585448 PROP1O75360 226 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 GAPDHP04406 335 aaKnown RBP5.37□□□□□ -1.55
SMAD4-203ENST00000585448 CTSLP07711 333 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 MMP7P09237 267 aaPredicted RBP5.37□□□□□ -1.55
SMAD4-203ENST00000585448 ANXA4P09525 319 aaPredicted RBP5.37□□□□□ -1.55
SMAD4-203ENST00000585448 AKAIN1P0CW23 69 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 PET100P0DJ07 73 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 PGA4P0DJD7 388 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 PGA5P0DJD9 388 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 SMIM17P0DL12 118 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 CALCBP10092 127 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 F3P13726 295 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 ZNF19P17023 458 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 GSTM3P21266 225 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 IL12BP29460 328 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 TIMP3P35625 211 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 ARL3P36405 182 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 AQP2P41181 271 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 PPICP45877 212 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 TFPI2P48307 235 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 CX3CR1P49238 355 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 BAXQ07812 192 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 PNRC1Q12796 327 aaPredicted RBP5.37□□□□□ -1.55
SMAD4-203ENST00000585448 CBFBQ13951 182 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 VAMP3Q15836 100 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 PRTGQ2VWP7 1150 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 ZNF789Q5FWF6 425 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 PRAMEF17Q5VTA0 474 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 ZNF770Q6IQ21 691 aaPredicted RBP5.37□□□□□ -1.55
SMAD4-203ENST00000585448 FAM71F2Q6NXP2 309 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 GGT6Q6P531 493 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 PRSS54Q6PEW0 395 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 Q6ZRG5 221 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 MBOAT2Q6ZWT7 520 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 SCD5Q86SK9 330 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 NR2C2APQ86WQ0 139 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 CPOQ8IVL8 374 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 KLHDC1Q8N7A1 406 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 OR8G5Q8NG78 346 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 OR4P4Q8NGL7 312 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 OR5B3Q8NH48 314 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 HASPINQ8TF76 798 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 PPP1R1CQ8WVI7 109 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 TMEM239Q8WW34 195 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 DCUN1D4Q92564 292 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 NDRG1Q92597 394 aaKnown RBP5.37□□□□□ -1.55
SMAD4-203ENST00000585448 DYRK2Q92630 601 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 ANKRD9Q96BM1 317 aaPredicted RBP5.37□□□□□ -1.55
SMAD4-203ENST00000585448 RASD2Q96D21 266 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 BTF3L4Q96K17 158 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 SNX22Q96L94 193 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 AQP10Q96PS8 301 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 C20orf24Q9BUV8 137 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 VAMP8Q9BV40 100 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 NMES1Q9C002 83 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 EIF5A2Q9GZV4 153 aaKnown RBP5.37□□□□□ -1.55
SMAD4-203ENST00000585448 AUNIPQ9H7T9 357 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 AGO4Q9HCK5 861 aaKnown RBP5.37□□□□□ -1.55
SMAD4-203ENST00000585448 NOX4Q9NPH5 578 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 TRIM36Q9NQ86 728 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 INPP5EQ9NRR6 644 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 ACER3Q9NUN7 267 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 MRPL15Q9P015 296 aaKnown RBP5.37□□□□□ -1.55
SMAD4-203ENST00000585448 CLN8Q9UBY8 286 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 SLC23A2Q9UGH3 650 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 PCTPQ9UKL6 214 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 NPIPA1Q9UND3 350 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 SCML2Q9UQR0 700 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 LAMTOR2Q9Y2Q5 125 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 TNFRSF18Q9Y5U5 241 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 ETV7Q9Y603 341 aa5.37□□□□□ -1.55
SMAD4-203ENST00000585448 TRAV26-1A0A087WT03 109 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 KCNE1BA0A087WTH5 132 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 LOC102723971A0A1B0GUV8 181 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 PGPEP1LA6NFU8 196 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 A6NIN4 97 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 MGST3O14880 152 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 HNRNPDLO14979 420 aaKnown RBP5.36□□□□□ -1.55
SMAD4-203ENST00000585448 ARPC3O15145 178 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 P2RX6O15547 441 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 JTBO76095 146 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 THY1P04216 161 aa5.36□□□□□ -1.55
SMAD4-203ENST00000585448 H1F0P07305 194 aaKnown RBP5.36□□□□□ -1.55
SMAD4-203ENST00000585448 CHRM2P08172 466 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms