RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 TOXO94900 526 aa16.59■□□□□ 0.25
SMPD3-203ENST00000563226 GSTP1P09211 210 aaKnown RBP16.59■□□□□ 0.25
SMPD3-203ENST00000563226 MTCP1P56278 107 aa16.59■□□□□ 0.25
SMPD3-203ENST00000563226 ATPAF1Q5TC12 328 aaPredicted RBP16.59■□□□□ 0.25
SMPD3-203ENST00000563226 C17orf107Q6ZR85 190 aa16.59■□□□□ 0.25
SMPD3-203ENST00000563226 ZNF100Q8IYN0 542 aa16.59■□□□□ 0.25
SMPD3-203ENST00000563226 C1QTNF5Q9BXJ0 243 aa16.59■□□□□ 0.25
SMPD3-203ENST00000563226 OR6C65A6NJZ3 312 aa16.58■□□□□ 0.25
SMPD3-203ENST00000563226 ZNF780AO75290 641 aaPredicted RBP16.58■□□□□ 0.25
SMPD3-203ENST00000563226 PLATP00750 562 aa16.58■□□□□ 0.25
SMPD3-203ENST00000563226 DNASE1P24855 282 aa16.58■□□□□ 0.25
SMPD3-203ENST00000563226 MEF2DQ14814 521 aa16.58■□□□□ 0.25
SMPD3-203ENST00000563226 STK11Q15831 433 aa16.58■□□□□ 0.25
SMPD3-203ENST00000563226 TMEM42Q69YG0 159 aa16.58■□□□□ 0.25
SMPD3-203ENST00000563226 TMED4Q7Z7H5 227 aa16.58■□□□□ 0.25
SMPD3-203ENST00000563226 SPSB1Q96BD6 273 aa16.58■□□□□ 0.25
SMPD3-203ENST00000563226 DISC1C4P0D8 188 aa16.58■□□□□ 0.24
SMPD3-203ENST00000563226 SPRY1O43609 319 aaPredicted RBP16.58■□□□□ 0.24
SMPD3-203ENST00000563226 CCNOP22674 350 aa16.58■□□□□ 0.24
SMPD3-203ENST00000563226 AGTR1P30556 359 aa16.58■□□□□ 0.24
SMPD3-203ENST00000563226 CXADRP78310 365 aa16.58■□□□□ 0.24
SMPD3-203ENST00000563226 C4orf46Q504U0 113 aa16.58■□□□□ 0.24
SMPD3-203ENST00000563226 TMEM53Q6P2H8 277 aa16.58■□□□□ 0.24
SMPD3-203ENST00000563226 IGF2-ASQ6U949 168 aa16.58■□□□□ 0.24
SMPD3-203ENST00000563226 S100A13Q99584 98 aa16.58■□□□□ 0.24
SMPD3-203ENST00000563226 SLC25A21Q9BQT8 299 aaPredicted RBP16.58■□□□□ 0.24
SMPD3-203ENST00000563226 PRDM14Q9GZV8 571 aa16.58■□□□□ 0.24
SMPD3-203ENST00000563226 ANAPC10Q9UM13 185 aa16.58■□□□□ 0.24
SMPD3-203ENST00000563226 VSIG4Q9Y279 399 aa16.58■□□□□ 0.24
SMPD3-203ENST00000563226 SLC22A20A6NK97 555 aa16.57■□□□□ 0.24
SMPD3-203ENST00000563226 PMP2P02689 132 aa16.57■□□□□ 0.24
SMPD3-203ENST00000563226 TMEM225BP0DP42 221 aa16.57■□□□□ 0.24
SMPD3-203ENST00000563226 CD79AP11912 226 aa16.57■□□□□ 0.24
SMPD3-203ENST00000563226 OR8B8Q15620 311 aa16.57■□□□□ 0.24
SMPD3-203ENST00000563226 CLVS2Q5SYC1 327 aa16.57■□□□□ 0.24
SMPD3-203ENST00000563226 COLCA1Q6ZS62 124 aa16.57■□□□□ 0.24
SMPD3-203ENST00000563226 UXS1Q8NBZ7 420 aa16.57■□□□□ 0.24
SMPD3-203ENST00000563226 GON7Q9BXV9 100 aa16.57■□□□□ 0.24
SMPD3-203ENST00000563226 RGCCQ9H4X1 137 aa16.57■□□□□ 0.24
SMPD3-203ENST00000563226 SLC2A8Q9NY64 477 aa16.57■□□□□ 0.24
SMPD3-203ENST00000563226 PRRC2CQ9Y520 2896 aaKnown RBP16.57■□□□□ 0.24
SMPD3-203ENST00000563226 RIF1Q5UIP0 2472 aaKnown RBP16.57■□□□□ 0.24
SMPD3-203ENST00000563226 UBE2QL1A1L167 161 aa16.57■□□□□ 0.24
SMPD3-203ENST00000563226 SIX6O95475 246 aa16.57■□□□□ 0.24
SMPD3-203ENST00000563226 NRASP01111 189 aa16.57■□□□□ 0.24
SMPD3-203ENST00000563226 OR4E1P0C645 316 aa16.57■□□□□ 0.24
SMPD3-203ENST00000563226 BLVRBP30043 206 aaPredicted RBP16.57■□□□□ 0.24
SMPD3-203ENST00000563226 CNN3Q15417 329 aaKnown RBP16.57■□□□□ 0.24
SMPD3-203ENST00000563226 DEFB109BQ30KR1 87 aa16.57■□□□□ 0.24
SMPD3-203ENST00000563226 SPSB4Q96A44 273 aa16.57■□□□□ 0.24
SMPD3-203ENST00000563226 TM2D1Q9BX74 207 aa16.57■□□□□ 0.24
SMPD3-203ENST00000563226 ATPIF1Q9UII2 106 aa16.57■□□□□ 0.24
SMPD3-203ENST00000563226 ZNF391Q9UJN7 358 aa16.57■□□□□ 0.24
SMPD3-203ENST00000563226 ZFHX2Q9C0A1 2572 aaPredicted RBP16.56■□□□□ 0.24
SMPD3-203ENST00000563226 C5orf49A4QMS7 147 aa16.56■□□□□ 0.24
SMPD3-203ENST00000563226 XRCC2O43543 280 aa16.56■□□□□ 0.24
SMPD3-203ENST00000563226 NOVA1P51513 510 aaKnown RBP16.56■□□□□ 0.24
SMPD3-203ENST00000563226 PNLIPRP3Q17RR3 467 aa16.56■□□□□ 0.24
SMPD3-203ENST00000563226 MICBQ29980 383 aa16.56■□□□□ 0.24
SMPD3-203ENST00000563226 IGFL2Q6UWQ7 119 aa16.56■□□□□ 0.24
SMPD3-203ENST00000563226 NAXEQ8NCW5 288 aa16.56■□□□□ 0.24
SMPD3-203ENST00000563226 OR2AK2Q8NG84 335 aa16.56■□□□□ 0.24
SMPD3-203ENST00000563226 FBXW5Q969U6 566 aa16.56■□□□□ 0.24
SMPD3-203ENST00000563226 PECRQ9BY49 303 aa16.56■□□□□ 0.24
SMPD3-203ENST00000563226 ALX4Q9H161 411 aaPredicted RBP16.56■□□□□ 0.24
SMPD3-203ENST00000563226 PTTG3PQ9NZH4 202 aa16.56■□□□□ 0.24
SMPD3-203ENST00000563226 ZNF581Q9P0T4 197 aa16.56■□□□□ 0.24
SMPD3-203ENST00000563226 OR2AT4A6NND4 320 aa16.55■□□□□ 0.24
SMPD3-203ENST00000563226 IL18BPO95998 194 aa16.55■□□□□ 0.24
SMPD3-203ENST00000563226 ZNF24P17028 368 aa16.55■□□□□ 0.24
SMPD3-203ENST00000563226 MPZP25189 248 aa16.55■□□□□ 0.24
SMPD3-203ENST00000563226 CLN3Q13286 438 aa16.55■□□□□ 0.24
SMPD3-203ENST00000563226 CAMK2BQ13554 666 aa16.55■□□□□ 0.24
SMPD3-203ENST00000563226 STEAP2Q8NFT2 490 aa16.55■□□□□ 0.24
SMPD3-203ENST00000563226 OR4K15Q8NH41 348 aa16.55■□□□□ 0.24
SMPD3-203ENST00000563226 PIGCQ92535 297 aa16.55■□□□□ 0.24
SMPD3-203ENST00000563226 BORCS8Q96FH0 119 aa16.55■□□□□ 0.24
SMPD3-203ENST00000563226 PRRT1Q99946 306 aa16.55■□□□□ 0.24
SMPD3-203ENST00000563226 CRIM1Q9NZV1 1036 aa16.55■□□□□ 0.24
SMPD3-203ENST00000563226 PLEKHA6Q9Y2H5 1048 aa16.55■□□□□ 0.24
SMPD3-203ENST00000563226 GIPP09681 153 aaPredicted RBP16.55■□□□□ 0.24
SMPD3-203ENST00000563226 NAT1P18440 290 aa16.55■□□□□ 0.24
SMPD3-203ENST00000563226 PRKACBP22694 351 aa16.55■□□□□ 0.24
SMPD3-203ENST00000563226 GABRR1P24046 479 aa16.55■□□□□ 0.24
SMPD3-203ENST00000563226 H2BFSP57053 126 aa16.55■□□□□ 0.24
SMPD3-203ENST00000563226 RAB1AP62820 205 aa16.55■□□□□ 0.24
SMPD3-203ENST00000563226 ARFRP1Q13795 201 aa16.55■□□□□ 0.24
SMPD3-203ENST00000563226 FAM189A2Q15884 450 aa16.55■□□□□ 0.24
SMPD3-203ENST00000563226 HIKESHIQ53FT3 197 aa16.55■□□□□ 0.24
SMPD3-203ENST00000563226 DCAF12L2Q5VW00 463 aa16.55■□□□□ 0.24
SMPD3-203ENST00000563226 MOB3CQ70IA8 216 aa16.55■□□□□ 0.24
SMPD3-203ENST00000563226 ST8SIA4Q92187 359 aa16.55■□□□□ 0.24
SMPD3-203ENST00000563226 Q96M66 194 aa16.55■□□□□ 0.24
SMPD3-203ENST00000563226 FN3KRPQ9HA64 309 aa16.55■□□□□ 0.24
SMPD3-203ENST00000563226 DLL3Q9NYJ7 618 aa16.55■□□□□ 0.24
SMPD3-203ENST00000563226 GOSR2O14653 212 aa16.54■□□□□ 0.24
SMPD3-203ENST00000563226 TSC22D2O75157 780 aa16.54■□□□□ 0.24
SMPD3-203ENST00000563226 OR2A4O95047 310 aa16.54■□□□□ 0.24
SMPD3-203ENST00000563226 HTR3BO95264 441 aa16.54■□□□□ 0.24
SMPD3-203ENST00000563226 CPT2P23786 658 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms