RNA–Protein interactions for RNA: ENST00000552127.5

BRF1-220, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-220ENST00000552127 C16orf87Q6PH81 154 aa12.76□□□□□ -0.37
BRF1-220ENST00000552127 C9orf139Q6ZV77 190 aa12.76□□□□□ -0.37
BRF1-220ENST00000552127 COMMD2Q86X83 199 aa12.76□□□□□ -0.37
BRF1-220ENST00000552127 SLC35F2Q8IXU6 374 aa12.76□□□□□ -0.37
BRF1-220ENST00000552127 HPSE2Q8WWQ2 592 aa12.76□□□□□ -0.37
BRF1-220ENST00000552127 PIGCQ92535 297 aa12.76□□□□□ -0.37
BRF1-220ENST00000552127 IL4I1Q96RQ9 567 aa12.76□□□□□ -0.37
BRF1-220ENST00000552127 MNTQ99583 582 aa12.76□□□□□ -0.37
BRF1-220ENST00000552127 GABARAPL3Q9BY60 117 aa12.76□□□□□ -0.37
BRF1-220ENST00000552127 FGF23Q9GZV9 251 aaPredicted RBP12.76□□□□□ -0.37
BRF1-220ENST00000552127 MS4A7Q9GZW8 240 aaPredicted RBP12.76□□□□□ -0.37
BRF1-220ENST00000552127 PBOV1Q9GZY1 135 aa12.76□□□□□ -0.37
BRF1-220ENST00000552127 BEX1Q9HBH7 125 aa12.76□□□□□ -0.37
BRF1-220ENST00000552127 KAAG1Q9UBP8 84 aa12.76□□□□□ -0.37
BRF1-220ENST00000552127 NUFIP1Q9UHK0 495 aaKnown RBP12.76□□□□□ -0.37
BRF1-220ENST00000552127 EPPK1P58107 5090 aaKnown RBP12.76□□□□□ -0.37
BRF1-220ENST00000552127 ZNF816-ZNF321PA0A0X1KG74 233 aa12.75□□□□□ -0.37
BRF1-220ENST00000552127 SAC3D1A6NKF1 404 aa12.75□□□□□ -0.37
BRF1-220ENST00000552127 SRRM5B3KS81 715 aa12.75□□□□□ -0.37
BRF1-220ENST00000552127 CDIPTO14735 213 aa12.75□□□□□ -0.37
BRF1-220ENST00000552127 IGLV3-1P01715 115 aa12.75□□□□□ -0.37
BRF1-220ENST00000552127 CFHR2P36980 270 aa12.75□□□□□ -0.37
BRF1-220ENST00000552127 CXCR4P61073 352 aa12.75□□□□□ -0.37
BRF1-220ENST00000552127 POU4F2Q12837 409 aa12.75□□□□□ -0.37
BRF1-220ENST00000552127 MICBQ29980 383 aa12.75□□□□□ -0.37
BRF1-220ENST00000552127 OLFML2AQ68BL7 652 aa12.75□□□□□ -0.37
BRF1-220ENST00000552127 ZNF322Q6U7Q0 402 aaPredicted RBP12.75□□□□□ -0.37
BRF1-220ENST00000552127 KCTD8Q6ZWB6 473 aa12.75□□□□□ -0.37
BRF1-220ENST00000552127 OR10Z1Q8NGY1 313 aa12.75□□□□□ -0.37
BRF1-220ENST00000552127 RPL3LQ92901 407 aaKnown RBP12.75□□□□□ -0.37
BRF1-220ENST00000552127 ITFG2Q969R8 447 aa12.75□□□□□ -0.37
BRF1-220ENST00000552127 RIBC2Q9H4K1 309 aa12.75□□□□□ -0.37
BRF1-220ENST00000552127 MOB1AQ9H8S9 216 aa12.75□□□□□ -0.37
BRF1-220ENST00000552127 GPR84Q9NQS5 396 aa12.75□□□□□ -0.37
BRF1-220ENST00000552127 CLN6Q9NWW5 311 aa12.75□□□□□ -0.37
BRF1-220ENST00000552127 HAO2Q9NYQ3 351 aa12.75□□□□□ -0.37
BRF1-220ENST00000552127 COL7A1Q02388 2944 aa12.74□□□□□ -0.37
BRF1-220ENST00000552127 ZNF670-ZNF695F2Z2N8 137 aa12.74□□□□□ -0.37
BRF1-220ENST00000552127 LOC110117498-PIK3R3F6TDL0 507 aa12.74□□□□□ -0.37
BRF1-220ENST00000552127 G3V4G9 280 aa12.74□□□□□ -0.37
BRF1-220ENST00000552127 DVL1O14640 695 aa12.74□□□□□ -0.37
BRF1-220ENST00000552127 SRSF10O75494 262 aaKnown RBP12.74□□□□□ -0.37
BRF1-220ENST00000552127 FCN3O75636 299 aa12.74□□□□□ -0.37
BRF1-220ENST00000552127 ATP6V1B1P15313 513 aa12.74□□□□□ -0.37
BRF1-220ENST00000552127 WDR38Q5JTN6 314 aa12.74□□□□□ -0.37
BRF1-220ENST00000552127 KRT74Q7RTS7 529 aa12.74□□□□□ -0.37
BRF1-220ENST00000552127 PNLDC1Q8NA58 520 aaKnown RBP12.74□□□□□ -0.37
BRF1-220ENST00000552127 SCCPDHQ8NBX0 429 aa12.74□□□□□ -0.37
BRF1-220ENST00000552127 FAM110DQ8TAY7 271 aaPredicted RBP12.74□□□□□ -0.37
BRF1-220ENST00000552127 OR51E1Q8TCB6 317 aa12.74□□□□□ -0.37
BRF1-220ENST00000552127 PYDC1Q8WXC3 89 aa12.74□□□□□ -0.37
BRF1-220ENST00000552127 ST8SIA4Q92187 359 aa12.74□□□□□ -0.37
BRF1-220ENST00000552127 C12orf43Q96C57 262 aaKnown RBP12.74□□□□□ -0.37
BRF1-220ENST00000552127 RNF170Q96K19 258 aa12.74□□□□□ -0.37
BRF1-220ENST00000552127 FAM71F1Q96KD3 344 aaPredicted RBP12.74□□□□□ -0.37
BRF1-220ENST00000552127 APOL4Q9BPW4 351 aa12.74□□□□□ -0.37
BRF1-220ENST00000552127 OSBPL10Q9BXB5 764 aa12.74□□□□□ -0.37
BRF1-220ENST00000552127 RASSF4Q9H2L5 321 aa12.74□□□□□ -0.37
BRF1-220ENST00000552127 BIRC6Q9NR09 4857 aa12.74□□□□□ -0.37
BRF1-220ENST00000552127 A0A1B0GW55 424 aa12.73□□□□□ -0.37
BRF1-220ENST00000552127 ZNF879B4DU55 563 aa12.73□□□□□ -0.37
BRF1-220ENST00000552127 ECDO95905 644 aaPredicted RBP12.73□□□□□ -0.37
BRF1-220ENST00000552127 TTRP02766 147 aa12.73□□□□□ -0.37
BRF1-220ENST00000552127 LIPFP07098 398 aa12.73□□□□□ -0.37
BRF1-220ENST00000552127 DUX4L2P0CJ85 424 aa12.73□□□□□ -0.37
BRF1-220ENST00000552127 DUX4L3P0CJ86 424 aa12.73□□□□□ -0.37
BRF1-220ENST00000552127 DUX4L4P0CJ87 422 aa12.73□□□□□ -0.37
BRF1-220ENST00000552127 DUX4L5P0CJ88 424 aa12.73□□□□□ -0.37
BRF1-220ENST00000552127 DUX4L6P0CJ89 424 aa12.73□□□□□ -0.37
BRF1-220ENST00000552127 DUX4L7P0CJ90 424 aa12.73□□□□□ -0.37
BRF1-220ENST00000552127 POLR2IP36954 125 aaKnown RBP12.73□□□□□ -0.37
BRF1-220ENST00000552127 MTNR1AP48039 350 aa12.73□□□□□ -0.37
BRF1-220ENST00000552127 GPM6AP51674 278 aa12.73□□□□□ -0.37
BRF1-220ENST00000552127 RAG2P55895 527 aa12.73□□□□□ -0.37
BRF1-220ENST00000552127 ACTR3P61158 418 aa12.73□□□□□ -0.37
BRF1-220ENST00000552127 ELF3P78545 371 aaPredicted RBP12.73□□□□□ -0.37
BRF1-220ENST00000552127 EGR3Q06889 387 aa12.73□□□□□ -0.37
BRF1-220ENST00000552127 RIPPLY1Q0D2K3 151 aa12.73□□□□□ -0.37
BRF1-220ENST00000552127 TAF9Q16594 264 aa12.73□□□□□ -0.37
BRF1-220ENST00000552127 C11orf91Q3C1V1 193 aa12.73□□□□□ -0.37
BRF1-220ENST00000552127 FAM76BQ5HYJ3 339 aa12.73□□□□□ -0.37
BRF1-220ENST00000552127 BCL2L15Q5TBC7 163 aa12.73□□□□□ -0.37
BRF1-220ENST00000552127 ZBTB37Q5TC79 503 aa12.73□□□□□ -0.37
BRF1-220ENST00000552127 STUMQ69YW2 141 aa12.73□□□□□ -0.37
BRF1-220ENST00000552127 DUX4L9Q6RFH8 374 aaPredicted RBP12.73□□□□□ -0.37
BRF1-220ENST00000552127 SLC36A1Q7Z2H8 476 aa12.73□□□□□ -0.37
BRF1-220ENST00000552127 THAP5Q7Z6K1 395 aa12.73□□□□□ -0.37
BRF1-220ENST00000552127 FAM216BQ8N7L0 139 aa12.73□□□□□ -0.37
BRF1-220ENST00000552127 OR51G2Q8NGK0 314 aa12.73□□□□□ -0.37
BRF1-220ENST00000552127 OR4F5Q8NH21 305 aa12.73□□□□□ -0.37
BRF1-220ENST00000552127 SEH1LQ96EE3 360 aa12.73□□□□□ -0.37
BRF1-220ENST00000552127 HIST1H2AAQ96QV6 131 aa12.73□□□□□ -0.37
BRF1-220ENST00000552127 CCL13Q99616 98 aa12.73□□□□□ -0.37
BRF1-220ENST00000552127 PCGF1Q9BSM1 259 aa12.73□□□□□ -0.37
BRF1-220ENST00000552127 DUX4Q9UBX2 424 aa12.73□□□□□ -0.37
BRF1-220ENST00000552127 WARS2Q9UGM6 360 aaKnown RBP12.73□□□□□ -0.37
BRF1-220ENST00000552127 GTF2A1LQ9UNN4 478 aa12.73□□□□□ -0.37
BRF1-220ENST00000552127 R4GMQ9 66 aa12.73□□□□□ -0.37
BRF1-220ENST00000552127 NKX6-3A6NJ46 265 aa12.72□□□□□ -0.37
BRF1-220ENST00000552127 P2RY10O00398 339 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms