RNA–Protein interactions for RNA: ENST00000509277.5

LIMCH1-209, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2 BASIC

Gene LIMCH1, Length 3,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-209ENST00000509277 TAAR6Q96RI8 345 aa7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 RBM24Q9BX46 236 aaKnown RBP7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 ADAM19Q9H013 955 aa7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 POFUT1Q9H488 388 aa7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 INTS1Q8N201 2190 aaKnown RBP7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 TMEM235A6NFC5 223 aa7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 IFNGP01579 166 aa7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 SNRPCP09234 159 aaKnown RBP7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 MMP7P09237 267 aaPredicted RBP7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 SMIM6P0DI80 62 aa7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 CLRN1P58418 232 aa7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 SURF2Q15527 256 aaPredicted RBP7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 AKR1C8PQ5T2L2 129 aa7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 GLDNQ6ZMI3 551 aaPredicted RBP7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 TMPPEQ6ZT21 453 aa7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 H1FNTQ75WM6 255 aaPredicted RBP7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 SLC35D2Q76EJ3 337 aa7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 FAM26EQ8N5C1 309 aa7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 MDS2Q8NDY4 140 aa7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 TMEM104Q8NE00 496 aa7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 OR4C16Q8NGL9 310 aa7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 MFSD8Q8NHS3 518 aa7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 ZBTB8AQ96BR9 441 aa7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 SRXN1Q9BYN0 137 aa7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 ATG5Q9H1Y0 275 aa7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 HIF3AQ9Y2N7 669 aa7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 AMDHD2Q9Y303 409 aa7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 FBXO7Q9Y3I1 522 aa7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 RELNP78509 3460 aa7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 ABCA4P78363 2273 aa7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 MYO18BQ8IUG5 2567 aa7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 A0A087WV48 116 aa7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 TMEM129A0AVI4 362 aa7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 MEX3AA1L020 520 aaKnown RBP7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 KDM4EB2RXH2 506 aaPredicted RBP7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 SFTA3P0C7M3 94 aa7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 MECP2P51608 486 aaKnown RBP7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 SUMO3P55854 103 aaPredicted RBP7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 RNF151Q2KHN1 245 aa7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 ELFN2Q5R3F8 820 aa7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 IGF2-ASQ6U949 168 aa7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 OR51D1Q8NGF3 324 aa7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 TSEN15Q8WW01 171 aaKnown RBP7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 TMEM41AQ96HV5 264 aa7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 GGACTQ9BVM4 153 aa7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 PIGMQ9H3S5 423 aa7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 CADP27708 2225 aa7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 IFNA2P01563 188 aa7.65□□□□□ -1.18
LIMCH1-209ENST00000509277 RIDAP52758 137 aaKnown RBP7.65□□□□□ -1.18
LIMCH1-209ENST00000509277 RASGEF1BQ0VAM2 473 aa7.65□□□□□ -1.18
LIMCH1-209ENST00000509277 GAMTQ14353 236 aa7.65□□□□□ -1.18
LIMCH1-209ENST00000509277 MEP1BQ16820 701 aa7.65□□□□□ -1.18
LIMCH1-209ENST00000509277 BEND4Q6ZU67 534 aa7.65□□□□□ -1.18
LIMCH1-209ENST00000509277 ALKBH3Q96Q83 286 aaPredicted RBP7.65□□□□□ -1.18
LIMCH1-209ENST00000509277 SLC25A32Q9H2D1 315 aa7.65□□□□□ -1.18
LIMCH1-209ENST00000509277 CHST11Q9NPF2 352 aa7.65□□□□□ -1.18
LIMCH1-209ENST00000509277 ASB6Q9NWX5 421 aa7.65□□□□□ -1.18
LIMCH1-209ENST00000509277 DCAF16Q9NXF7 216 aa7.65□□□□□ -1.18
LIMCH1-209ENST00000509277 NOSIPQ9Y314 301 aaKnown RBP7.65□□□□□ -1.18
LIMCH1-209ENST00000509277 GGT3PA6NGU5 568 aa7.65□□□□□ -1.18
LIMCH1-209ENST00000509277 G3V3Q6 166 aa7.65□□□□□ -1.18
LIMCH1-209ENST00000509277 TSTD3H0UI37 97 aa7.65□□□□□ -1.18
LIMCH1-209ENST00000509277 ARL6IP5O75915 188 aa7.65□□□□□ -1.18
LIMCH1-209ENST00000509277 SCAF4O95104 1147 aaKnown RBP7.65□□□□□ -1.18
LIMCH1-209ENST00000509277 RENP00797 406 aa7.65□□□□□ -1.18
LIMCH1-209ENST00000509277 ADCYAP1P18509 176 aa7.65□□□□□ -1.18
LIMCH1-209ENST00000509277 SSTP61278 116 aa7.65□□□□□ -1.18
LIMCH1-209ENST00000509277 RAC1P63000 192 aa7.65□□□□□ -1.18
LIMCH1-209ENST00000509277 SLC9A3R2Q15599 337 aa7.65□□□□□ -1.18
LIMCH1-209ENST00000509277 RNF212Q495C1 297 aa7.65□□□□□ -1.18
LIMCH1-209ENST00000509277 CDNFQ49AH0 187 aa7.65□□□□□ -1.18
LIMCH1-209ENST00000509277 TMPRSS11FQ6ZWK6 438 aa7.65□□□□□ -1.18
LIMCH1-209ENST00000509277 OR6V1Q8N148 313 aa7.65□□□□□ -1.18
LIMCH1-209ENST00000509277 LRRC18Q8N456 261 aa7.65□□□□□ -1.18
LIMCH1-209ENST00000509277 KCNRGQ8N5I3 272 aa7.65□□□□□ -1.18
LIMCH1-209ENST00000509277 ZNF676Q8N7Q3 588 aa7.65□□□□□ -1.18
LIMCH1-209ENST00000509277 RBMXL3Q8N7X1 1067 aaKnown RBP7.65□□□□□ -1.18
LIMCH1-209ENST00000509277 FADS6Q8N9I5 356 aa7.65□□□□□ -1.18
LIMCH1-209ENST00000509277 OR4S1Q8NGB4 309 aa7.65□□□□□ -1.18
LIMCH1-209ENST00000509277 OR1J2Q8NGS2 313 aa7.65□□□□□ -1.18
LIMCH1-209ENST00000509277 OR6N2Q8NGY6 317 aa7.65□□□□□ -1.18
LIMCH1-209ENST00000509277 THEM6Q8WUY1 208 aa7.65□□□□□ -1.18
LIMCH1-209ENST00000509277 ZNF385AQ96PM9 386 aaKnown RBP7.65□□□□□ -1.18
LIMCH1-209ENST00000509277 METTL8Q9H825 291 aaKnown RBP7.65□□□□□ -1.18
LIMCH1-209ENST00000509277 SMCO4Q9NRQ5 59 aa7.65□□□□□ -1.18
LIMCH1-209ENST00000509277 LOC102724200A0A096LPH7 203 aaPredicted RBP7.65□□□□□ -1.19
LIMCH1-209ENST00000509277 LIPT2A6NK58 231 aa7.65□□□□□ -1.19
LIMCH1-209ENST00000509277 ZNF208O43345 1280 aa7.65□□□□□ -1.19
LIMCH1-209ENST00000509277 AQP8O94778 261 aa7.65□□□□□ -1.19
LIMCH1-209ENST00000509277 BGLAPP02818 100 aa7.65□□□□□ -1.19
LIMCH1-209ENST00000509277 CD14P08571 375 aa7.65□□□□□ -1.19
LIMCH1-209ENST00000509277 ZNF25P17030 456 aaPredicted RBP7.65□□□□□ -1.19
LIMCH1-209ENST00000509277 CD53P19397 219 aa7.65□□□□□ -1.19
LIMCH1-209ENST00000509277 FGF9P31371 208 aaPredicted RBP7.65□□□□□ -1.19
LIMCH1-209ENST00000509277 CDAP32320 146 aa7.65□□□□□ -1.19
LIMCH1-209ENST00000509277 GUCA1AP43080 201 aaPredicted RBP7.65□□□□□ -1.19
LIMCH1-209ENST00000509277 MTNR1BP49286 362 aa7.65□□□□□ -1.19
LIMCH1-209ENST00000509277 CSNK2A1P68400 391 aaPredicted RBP7.65□□□□□ -1.19
LIMCH1-209ENST00000509277 HABP2Q14520 560 aaPredicted RBP7.65□□□□□ -1.19
LIMCH1-209ENST00000509277 DND1Q8IYX4 353 aaKnown RBP7.65□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms