RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 ARHGDIGQ99819 225 aa2.82□□□□□ -1.96
HMGB1P22-201ENST00000505315 WACQ9BTA9 647 aa2.82□□□□□ -1.96
HMGB1P22-201ENST00000505315 FAAP24Q9BTP7 215 aa2.82□□□□□ -1.96
HMGB1P22-201ENST00000505315 ULBP1Q9BZM6 244 aa2.82□□□□□ -1.96
HMGB1P22-201ENST00000505315 SH2D2AQ9NP31 389 aa2.82□□□□□ -1.96
HMGB1P22-201ENST00000505315 GID8Q9NWU2 228 aa2.82□□□□□ -1.96
HMGB1P22-201ENST00000505315 CLCF1Q9UBD9 225 aa2.82□□□□□ -1.96
HMGB1P22-201ENST00000505315 SIGLEC9Q9Y336 463 aa2.82□□□□□ -1.96
HMGB1P22-201ENST00000505315 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.82□□□□□ -1.96
HMGB1P22-201ENST00000505315 ANKRD30AQ9BXX3 1397 aa2.82□□□□□ -1.96
HMGB1P22-201ENST00000505315 FER1L5A0AVI2 2057 aa2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 CEACAM18A8MTB9 384 aa2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 LINC01619G3V211 115 aa2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 KCNK1O00180 336 aa2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 UGT2B11O75310 529 aa2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 DCTN3O75935 186 aa2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 VENTXO95231 258 aa2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 CNIH1O95406 144 aa2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 IL6P05231 212 aa2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 IGKV2-30P06310 120 aa2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 IGKV5-2P06315 115 aa2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 SNHG28P0DPA3 235 aa2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 CD99P14209 185 aa2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 AKR1C4P17516 323 aa2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 FUT3P21217 361 aa2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 DTYMKP23919 212 aa2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 ADORA1P30542 326 aa2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 CDKN2BP42772 138 aa2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 CBX5P45973 191 aa2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 FGF8P55075 233 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 CDKN2DP55273 166 aa2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 UBE2NP61088 152 aaKnown RBP2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 CCL7P80098 99 aa2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 PPP1R1AQ13522 171 aa2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 PON3Q15166 354 aa2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 SHHQ15465 462 aa2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 SLC9A3R2Q15599 337 aa2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 TMEM176BQ3YBM2 270 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 METTL21CQ5VZV1 264 aa2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 XKRXQ6PP77 449 aa2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 FAM131AQ6UXB0 335 aa2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 ZNF493Q6ZR52 646 aa2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 SMIM15Q7Z3B0 74 aa2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 SLC25A42Q86VD7 318 aa2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 LGI3Q8N145 548 aa2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 STPG2Q8N412 459 aa2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 FAM71E2Q8N5Q1 922 aa2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 TBC1D19Q8N5T2 526 aa2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 NPWQ8N729 165 aa2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 COX18Q8N8Q8 333 aa2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 OR13G1Q8NGZ3 307 aa2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 NEIL3Q8TAT5 605 aa2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 STOML3Q8TAV4 291 aa2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 TEX47Q8TBZ9 253 aa2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 CYGBQ8WWM9 190 aa2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 UCN3Q969E3 161 aa2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 NTAN1Q96AB6 310 aa2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 RPUSD4Q96CM3 377 aaKnown RBP2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 PGLYRP2Q96PD5 576 aa2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 ZNF184Q99676 751 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 SLC25A2Q9BXI2 301 aa2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 TSGA10Q9BZW7 698 aa2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 TRIM15Q9C019 465 aa2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 RRAGDQ9NQL2 400 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 C8orf4Q9NR00 106 aa2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 CTSZQ9UBR2 303 aa2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 C14orf166Q9Y224 244 aaKnown RBP2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 HES2Q9Y543 173 aa2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 PCDH11XQ9BZA7 1347 aa2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 CEMIPQ8WUJ3 1361 aa2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 ABCC11Q96J66 1382 aa2.81□□□□□ -1.96
HMGB1P22-201ENST00000505315 IGLV8-61A0A075B6I0 122 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 RBFOX3A6NFN3 312 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 I3L4J1 428 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 PSMD12O00232 456 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 SOCS3O14543 225 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 PHYHO14832 338 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 SYNGR1O43759 233 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 NDUFS5O43920 106 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 GALR3O60755 368 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 SLC22A5O76082 557 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 IGLV2-11P01706 119 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 OR4E1P0C645 316 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 C8orf88P0DMB2 117 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 SPNP16150 400 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 RAB3AP20336 220 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 CCNE1P24864 410 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 PAX6P26367 422 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 GDF1P27539 372 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 RPL12P30050 165 aaKnown RBP2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 ACVRL1P37023 503 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 KIR3DL2P43630 455 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 ACOT2P49753 483 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 P2RY4P51582 365 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 CCL23P55773 120 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 HBG1P69891 147 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 HBG2P69892 147 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 CXCL6P80162 114 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 RPL36AP83881 106 aaKnown RBP2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 FAM3AP98173 230 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms