RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 CEACAM8P31997 349 aaPredicted RBP8.89□□□□□ -0.99
HDAC3-214ENST00000495485 OPRM1P35372 400 aa8.89□□□□□ -0.99
HDAC3-214ENST00000495485 PTGFRP43088 359 aa8.89□□□□□ -0.99
HDAC3-214ENST00000495485 KIR2DL2P43627 348 aaPredicted RBP8.89□□□□□ -0.99
HDAC3-214ENST00000495485 CBX5P45973 191 aa8.89□□□□□ -0.99
HDAC3-214ENST00000495485 RAG2P55895 527 aa8.89□□□□□ -0.99
HDAC3-214ENST00000495485 MTCP1P56278 107 aa8.89□□□□□ -0.99
HDAC3-214ENST00000495485 RAB25P57735 213 aa8.89□□□□□ -0.99
HDAC3-214ENST00000495485 BTG1P62324 171 aa8.89□□□□□ -0.99
HDAC3-214ENST00000495485 DGCR2P98153 550 aa8.89□□□□□ -0.99
HDAC3-214ENST00000495485 GUSBP1Q15486 140 aa8.89□□□□□ -0.99
HDAC3-214ENST00000495485 OR8B8Q15620 311 aa8.89□□□□□ -0.99
HDAC3-214ENST00000495485 SFRP5Q5T4F7 317 aa8.89□□□□□ -0.99
HDAC3-214ENST00000495485 FJX1Q86VR8 437 aa8.89□□□□□ -0.99
HDAC3-214ENST00000495485 LYPD6Q86Y78 171 aa8.89□□□□□ -0.99
HDAC3-214ENST00000495485 IZUMO1Q8IYV9 350 aa8.89□□□□□ -0.99
HDAC3-214ENST00000495485 OR5AS1Q8N127 324 aa8.89□□□□□ -0.99
HDAC3-214ENST00000495485 GABRG1Q8N1C3 465 aa8.89□□□□□ -0.99
HDAC3-214ENST00000495485 DTX3Q8N9I9 347 aa8.89□□□□□ -0.99
HDAC3-214ENST00000495485 CPEB3Q8NE35 698 aaKnown RBP8.89□□□□□ -0.99
HDAC3-214ENST00000495485 OR4D6Q8NGJ1 314 aa8.89□□□□□ -0.99
HDAC3-214ENST00000495485 CHAC2Q8WUX2 184 aa8.89□□□□□ -0.99
HDAC3-214ENST00000495485 POM121L2Q96KW2 1035 aa8.89□□□□□ -0.99
HDAC3-214ENST00000495485 USB1Q9BQ65 265 aaKnown RBP8.89□□□□□ -0.99
HDAC3-214ENST00000495485 SFXN3Q9BWM7 321 aa8.89□□□□□ -0.99
HDAC3-214ENST00000495485 TMEM59Q9BXS4 323 aa8.89□□□□□ -0.99
HDAC3-214ENST00000495485 B3GNT2Q9NY97 397 aa8.89□□□□□ -0.99
HDAC3-214ENST00000495485 AMDHD2Q9Y303 409 aa8.89□□□□□ -0.99
HDAC3-214ENST00000495485 NOP16Q9Y3C1 178 aaKnown RBP8.89□□□□□ -0.99
HDAC3-214ENST00000495485 FREM1Q5H8C1 2179 aa8.89□□□□□ -0.99
HDAC3-214ENST00000495485 UTP20O75691 2785 aaKnown RBP8.89□□□□□ -0.99
HDAC3-214ENST00000495485 hCG_38984A0A1B0GV85 526 aa8.88□□□□□ -0.99
HDAC3-214ENST00000495485 ANKRD20A5PA0PJZ0 165 aa8.88□□□□□ -0.99
HDAC3-214ENST00000495485 TMEM14DPA8MWL7 114 aa8.88□□□□□ -0.99
HDAC3-214ENST00000495485 H7C417 338 aa8.88□□□□□ -0.99
HDAC3-214ENST00000495485 GMDSO60547 372 aa8.88□□□□□ -0.99
HDAC3-214ENST00000495485 CYB5AP00167 134 aa8.88□□□□□ -0.99
HDAC3-214ENST00000495485 GSTP1P09211 210 aaKnown RBP8.88□□□□□ -0.99
HDAC3-214ENST00000495485 TRAPPC2P0DI81 140 aa8.88□□□□□ -0.99
HDAC3-214ENST00000495485 TRAPPC2BP0DI82 140 aa8.88□□□□□ -0.99
HDAC3-214ENST00000495485 GLI4P10075 376 aa8.88□□□□□ -0.99
HDAC3-214ENST00000495485 CBR1P16152 277 aa8.88□□□□□ -0.99
HDAC3-214ENST00000495485 IGHV1-2P23083 117 aa8.88□□□□□ -0.99
HDAC3-214ENST00000495485 SLC6A1P30531 599 aa8.88□□□□□ -0.99
HDAC3-214ENST00000495485 RFX2P48378 723 aa8.88□□□□□ -0.99
HDAC3-214ENST00000495485 TAS2R19P59542 299 aa8.88□□□□□ -0.99
HDAC3-214ENST00000495485 FAM3AP98173 230 aa8.88□□□□□ -0.99
HDAC3-214ENST00000495485 PPA1Q15181 289 aa8.88□□□□□ -0.99
HDAC3-214ENST00000495485 AGAP6Q5VW22 663 aa8.88□□□□□ -0.99
HDAC3-214ENST00000495485 PLXDC2Q6UX71 529 aa8.88□□□□□ -0.99
HDAC3-214ENST00000495485 DNM1P46Q6ZS02 220 aa8.88□□□□□ -0.99
HDAC3-214ENST00000495485 MOB3CQ70IA8 216 aa8.88□□□□□ -0.99
HDAC3-214ENST00000495485 SSX8Q7RTT4 187 aa8.88□□□□□ -0.99
HDAC3-214ENST00000495485 GCNT2Q8N0V5 402 aa8.88□□□□□ -0.99
HDAC3-214ENST00000495485 C9orf106Q8NAJ2 232 aa8.88□□□□□ -0.99
HDAC3-214ENST00000495485 CHST4Q8NCG5 386 aa8.88□□□□□ -0.99
HDAC3-214ENST00000495485 SLC30A7Q8NEW0 376 aa8.88□□□□□ -0.99
HDAC3-214ENST00000495485 OR10R2Q8NGX6 335 aa8.88□□□□□ -0.99
HDAC3-214ENST00000495485 OR52I2Q8NH67 350 aa8.88□□□□□ -0.99
HDAC3-214ENST00000495485 FGFBP3Q8TAT2 258 aa8.88□□□□□ -0.99
HDAC3-214ENST00000495485 TNFAIP8L1Q8WVP5 186 aa8.88□□□□□ -0.99
HDAC3-214ENST00000495485 PIGCQ92535 297 aa8.88□□□□□ -0.99
HDAC3-214ENST00000495485 MRPS24Q96EL2 167 aaKnown RBP8.88□□□□□ -0.99
HDAC3-214ENST00000495485 CCDC120Q96HB5 630 aa8.88□□□□□ -0.99
HDAC3-214ENST00000495485 MARVELD1Q9BSK0 173 aa8.88□□□□□ -0.99
HDAC3-214ENST00000495485 REPIN1Q9BWE0 567 aaKnown RBP8.88□□□□□ -0.99
HDAC3-214ENST00000495485 CACNG6Q9BXT2 260 aa8.88□□□□□ -0.99
HDAC3-214ENST00000495485 PIGMQ9H3S5 423 aa8.88□□□□□ -0.99
HDAC3-214ENST00000495485 ZNF224Q9NZL3 707 aa8.88□□□□□ -0.99
HDAC3-214ENST00000495485 NLKQ9UBE8 527 aa8.88□□□□□ -0.99
HDAC3-214ENST00000495485 MTFP1Q9UDX5 166 aa8.88□□□□□ -0.99
HDAC3-214ENST00000495485 RBMX2Q9Y388 322 aaKnown RBP8.88□□□□□ -0.99
HDAC3-214ENST00000495485 FAM215AQ9Y5M1 114 aa8.88□□□□□ -0.99
HDAC3-214ENST00000495485 UNC79Q9P2D8 2635 aa8.88□□□□□ -0.99
HDAC3-214ENST00000495485 ABCA4P78363 2273 aa8.88□□□□□ -0.99
HDAC3-214ENST00000495485 LOC100509620A0A075B734 347 aa8.87□□□□□ -0.99
HDAC3-214ENST00000495485 MEIOCA2RUB1 952 aa8.87□□□□□ -0.99
HDAC3-214ENST00000495485 ANKRD30BLA7E2S9 258 aa8.87□□□□□ -0.99
HDAC3-214ENST00000495485 PRSS44E7EML9 344 aa8.87□□□□□ -0.99
HDAC3-214ENST00000495485 INMT-MINDY4F8WBC2 141 aa8.87□□□□□ -0.99
HDAC3-214ENST00000495485 CDC14BO60729 498 aa8.87□□□□□ -0.99
HDAC3-214ENST00000495485 PRAF2O60831 178 aa8.87□□□□□ -0.99
HDAC3-214ENST00000495485 CRTAPO75718 401 aaPredicted RBP8.87□□□□□ -0.99
HDAC3-214ENST00000495485 RAD51DO75771 328 aa8.87□□□□□ -0.99
HDAC3-214ENST00000495485 WISP2O76076 250 aa8.87□□□□□ -0.99
HDAC3-214ENST00000495485 MPIG6BO95866 241 aa8.87□□□□□ -0.99
HDAC3-214ENST00000495485 CST4P01036 141 aa8.87□□□□□ -0.99
HDAC3-214ENST00000495485 AKAIN1P0CW23 69 aa8.87□□□□□ -0.99
HDAC3-214ENST00000495485 TMEM225BP0DP42 221 aa8.87□□□□□ -0.99
HDAC3-214ENST00000495485 VSIG8P0DPA2 414 aa8.87□□□□□ -0.99
HDAC3-214ENST00000495485 NAT2P11245 290 aa8.87□□□□□ -0.99
HDAC3-214ENST00000495485 COX5AP20674 150 aa8.87□□□□□ -0.99
HDAC3-214ENST00000495485 CPT2P23786 658 aa8.87□□□□□ -0.99
HDAC3-214ENST00000495485 HLA-DMAP28067 261 aa8.87□□□□□ -0.99
HDAC3-214ENST00000495485 KIR2DL3P43628 341 aa8.87□□□□□ -0.99
HDAC3-214ENST00000495485 ZNF92Q03936 586 aa8.87□□□□□ -0.99
HDAC3-214ENST00000495485 KLF9Q13886 244 aaPredicted RBP8.87□□□□□ -0.99
HDAC3-214ENST00000495485 RSU1Q15404 277 aa8.87□□□□□ -0.99
HDAC3-214ENST00000495485 UBE2V2Q15819 145 aa8.87□□□□□ -0.99
HDAC3-214ENST00000495485 GABRA6Q16445 453 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 159.7 ms