RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 TMEM185AQ8NFB2 350 aa14.29□□□□□ -0.12
NUP50-218ENST00000493456 GNPDA2Q8TDQ7 276 aa14.29□□□□□ -0.12
NUP50-218ENST00000493456 OR5P3Q8WZ94 311 aa14.29□□□□□ -0.12
NUP50-218ENST00000493456 WWC2-AS2Q96NR7 200 aa14.29□□□□□ -0.12
NUP50-218ENST00000493456 PRSS22Q9GZN4 317 aa14.29□□□□□ -0.12
NUP50-218ENST00000493456 EGLN3Q9H6Z9 239 aa14.29□□□□□ -0.12
NUP50-218ENST00000493456 ABCD2Q9UBJ2 740 aa14.29□□□□□ -0.12
NUP50-218ENST00000493456 ZNF222Q9UK12 451 aa14.29□□□□□ -0.12
NUP50-218ENST00000493456 PITPNC1Q9UKF7 332 aa14.29□□□□□ -0.12
NUP50-218ENST00000493456 CDH10Q9Y6N8 788 aa14.29□□□□□ -0.12
NUP50-218ENST00000493456 IGKV1D-17A0A075B6S4 117 aa14.28□□□□□ -0.12
NUP50-218ENST00000493456 hCG_1809904A0A1W2PP81 198 aa14.28□□□□□ -0.12
NUP50-218ENST00000493456 A0A1W2PPE2 198 aa14.28□□□□□ -0.12
NUP50-218ENST00000493456 A0A1W2PR64 198 aa14.28□□□□□ -0.12
NUP50-218ENST00000493456 A0A1W2PRV1 198 aa14.28□□□□□ -0.12
NUP50-218ENST00000493456 CST4P01036 141 aa14.28□□□□□ -0.12
NUP50-218ENST00000493456 ALDOBP05062 364 aa14.28□□□□□ -0.12
NUP50-218ENST00000493456 DCTDP32321 178 aa14.28□□□□□ -0.12
NUP50-218ENST00000493456 BLVRAP53004 296 aa14.28□□□□□ -0.12
NUP50-218ENST00000493456 ZNF121P58317 390 aaPredicted RBP14.28□□□□□ -0.12
NUP50-218ENST00000493456 SLC35A2P78381 396 aa14.28□□□□□ -0.12
NUP50-218ENST00000493456 PRDX4Q13162 271 aa14.28□□□□□ -0.12
NUP50-218ENST00000493456 GLYATQ6IB77 296 aa14.28□□□□□ -0.12
NUP50-218ENST00000493456 HACD2Q6Y1H2 254 aa14.28□□□□□ -0.12
NUP50-218ENST00000493456 ZNF511Q8NB15 262 aa14.28□□□□□ -0.12
NUP50-218ENST00000493456 SLC37A3Q8NCC5 494 aa14.28□□□□□ -0.12
NUP50-218ENST00000493456 FOXRED1Q96CU9 486 aaPredicted RBP14.28□□□□□ -0.12
NUP50-218ENST00000493456 SDSLQ96GA7 329 aa14.28□□□□□ -0.12
NUP50-218ENST00000493456 OCSTAMPQ9BR26 566 aa14.28□□□□□ -0.12
NUP50-218ENST00000493456 ZNF850A8MQ14 1090 aa14.27□□□□□ -0.13
NUP50-218ENST00000493456 GMNNO75496 209 aa14.27□□□□□ -0.13
NUP50-218ENST00000493456 PSG2P11465 335 aa14.27□□□□□ -0.13
NUP50-218ENST00000493456 COX4I1P13073 169 aa14.27□□□□□ -0.13
NUP50-218ENST00000493456 EIF2B1Q14232 305 aaKnown RBP14.27□□□□□ -0.13
NUP50-218ENST00000493456 ZDHHC23Q8IYP9 409 aa14.27□□□□□ -0.13
NUP50-218ENST00000493456 RPS4Y2Q8TD47 263 aa14.27□□□□□ -0.13
NUP50-218ENST00000493456 RNF133Q8WVZ7 376 aa14.27□□□□□ -0.13
NUP50-218ENST00000493456 HPSE2Q8WWQ2 592 aa14.27□□□□□ -0.13
NUP50-218ENST00000493456 RNF170Q96K19 258 aa14.27□□□□□ -0.13
NUP50-218ENST00000493456 EFCAB1Q9HAE3 211 aa14.27□□□□□ -0.13
NUP50-218ENST00000493456 ABCB10Q9NRK6 738 aa14.27□□□□□ -0.13
NUP50-218ENST00000493456 C19orf12Q9NSK7 152 aa14.27□□□□□ -0.13
NUP50-218ENST00000493456 FGFR1OP2Q9NVK5 253 aa14.27□□□□□ -0.13
NUP50-218ENST00000493456 DNAJC27Q9NZQ0 273 aa14.27□□□□□ -0.13
NUP50-218ENST00000493456 FAM90A8PA6NJQ4 464 aa14.26□□□□□ -0.13
NUP50-218ENST00000493456 DUS4LO95620 317 aaKnown RBP14.26□□□□□ -0.13
NUP50-218ENST00000493456 SEMG1P04279 462 aa14.26□□□□□ -0.13
NUP50-218ENST00000493456 GYPBP06028 91 aa14.26□□□□□ -0.13
NUP50-218ENST00000493456 PF4V1P10720 104 aa14.26□□□□□ -0.13
NUP50-218ENST00000493456 SPI1P17947 270 aa14.26□□□□□ -0.13
NUP50-218ENST00000493456 ACKR3P25106 362 aa14.26□□□□□ -0.13
NUP50-218ENST00000493456 CAPZA1P52907 286 aa14.26□□□□□ -0.13
NUP50-218ENST00000493456 SLC25A1P53007 311 aa14.26□□□□□ -0.13
NUP50-218ENST00000493456 ERVFRD-1P60508 538 aa14.26□□□□□ -0.13
NUP50-218ENST00000493456 RPL31P62899 125 aaKnown RBP14.26□□□□□ -0.13
NUP50-218ENST00000493456 SF3A3Q12874 501 aaKnown RBP eCLIP14.26□□□□□ -0.13
NUP50-218ENST00000493456 ARSJQ5FYB0 599 aaPredicted RBP14.26□□□□□ -0.13
NUP50-218ENST00000493456 CGB2Q6NT52 195 aa14.26□□□□□ -0.13
NUP50-218ENST00000493456 TIGD4Q8IY51 512 aa14.26□□□□□ -0.13
NUP50-218ENST00000493456 OR6K6Q8NGW6 343 aa14.26□□□□□ -0.13
NUP50-218ENST00000493456 PGAM5Q96HS1 289 aa14.26□□□□□ -0.13
NUP50-218ENST00000493456 RCC1LQ96I51 464 aaKnown RBP14.26□□□□□ -0.13
NUP50-218ENST00000493456 NMNAT2Q9BZQ4 307 aa14.26□□□□□ -0.13
NUP50-218ENST00000493456 FGF23Q9GZV9 251 aaPredicted RBP14.26□□□□□ -0.13
NUP50-218ENST00000493456 IL20Q9NYY1 176 aa14.26□□□□□ -0.13
NUP50-218ENST00000493456 USE1Q9NZ43 259 aa14.26□□□□□ -0.13
NUP50-218ENST00000493456 ZNF319Q9P2F9 582 aa14.26□□□□□ -0.13
NUP50-218ENST00000493456 A6NDX4 124 aa14.25□□□□□ -0.13
NUP50-218ENST00000493456 COX7A1P24310 79 aa14.25□□□□□ -0.13
NUP50-218ENST00000493456 RRM2P31350 389 aa14.25□□□□□ -0.13
NUP50-218ENST00000493456 VDAC2P45880 294 aaPredicted RBP14.25□□□□□ -0.13
NUP50-218ENST00000493456 NUDT2P50583 147 aa14.25□□□□□ -0.13
NUP50-218ENST00000493456 CD69Q07108 199 aa14.25□□□□□ -0.13
NUP50-218ENST00000493456 CRMP1Q14194 572 aa14.25□□□□□ -0.13
NUP50-218ENST00000493456 DEFB121Q5J5C9 76 aa14.25□□□□□ -0.13
NUP50-218ENST00000493456 CCBE1Q6UXH8 406 aaPredicted RBP14.25□□□□□ -0.13
NUP50-218ENST00000493456 THAP5Q7Z6K1 395 aa14.25□□□□□ -0.13
NUP50-218ENST00000493456 TMEM219Q86XT9 240 aa14.25□□□□□ -0.13
NUP50-218ENST00000493456 C11orf42Q8N5U0 333 aa14.25□□□□□ -0.13
NUP50-218ENST00000493456 PIGCQ92535 297 aa14.25□□□□□ -0.13
NUP50-218ENST00000493456 MCUR1Q96AQ8 359 aa14.25□□□□□ -0.13
NUP50-218ENST00000493456 PYURFQ96I23 114 aa14.25□□□□□ -0.13
NUP50-218ENST00000493456 HIST1H2AAQ96QV6 131 aa14.25□□□□□ -0.13
NUP50-218ENST00000493456 TBL2Q9Y4P3 447 aaKnown RBP14.25□□□□□ -0.13
NUP50-218ENST00000493456 V9GYQ6 96 aa14.25□□□□□ -0.13
NUP50-218ENST00000493456 RHBDL1O75783 438 aa14.24□□□□□ -0.13
NUP50-218ENST00000493456 PF4P02776 101 aa14.24□□□□□ -0.13
NUP50-218ENST00000493456 OPRL1P41146 370 aa14.24□□□□□ -0.13
NUP50-218ENST00000493456 GPM6AP51674 278 aa14.24□□□□□ -0.13
NUP50-218ENST00000493456 GNG3P63215 75 aa14.24□□□□□ -0.13
NUP50-218ENST00000493456 CD83Q01151 205 aa14.24□□□□□ -0.13
NUP50-218ENST00000493456 PLA1AQ53H76 456 aa14.24□□□□□ -0.13
NUP50-218ENST00000493456 LHFPL4Q7Z7J7 247 aa14.24□□□□□ -0.13
NUP50-218ENST00000493456 ZNF671Q8TAW3 534 aa14.24□□□□□ -0.13
NUP50-218ENST00000493456 MALSU1Q96EH3 234 aa14.24□□□□□ -0.13
NUP50-218ENST00000493456 OR5M11Q96RB7 305 aa14.24□□□□□ -0.13
NUP50-218ENST00000493456 INTS14Q96SY0 518 aa14.24□□□□□ -0.13
NUP50-218ENST00000493456 ABHD6Q9BV23 337 aa14.24□□□□□ -0.13
NUP50-218ENST00000493456 YY1AP1Q9H869 796 aa14.24□□□□□ -0.13
NUP50-218ENST00000493456 GORASP2Q9H8Y8 452 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms