RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 ITPKCQ96DU7 683 aa9.43□□□□□ -0.9
HDLBP-242ENST00000488013 TRMT61AQ96FX7 289 aaKnown RBP9.43□□□□□ -0.9
HDLBP-242ENST00000488013 RNF170Q96K19 258 aa9.43□□□□□ -0.9
HDLBP-242ENST00000488013 SORCS2Q96PQ0 1159 aa9.43□□□□□ -0.9
HDLBP-242ENST00000488013 SOX7Q9BT81 388 aa9.43□□□□□ -0.9
HDLBP-242ENST00000488013 ADAT1Q9BUB4 502 aaKnown RBP9.43□□□□□ -0.9
HDLBP-242ENST00000488013 EGLN1Q9GZT9 426 aa9.43□□□□□ -0.9
HDLBP-242ENST00000488013 CXXC4Q9H2H0 198 aa9.43□□□□□ -0.9
HDLBP-242ENST00000488013 CLEC4MQ9H2X3 399 aaPredicted RBP9.43□□□□□ -0.9
HDLBP-242ENST00000488013 METTL17Q9H7H0 456 aaPredicted RBP9.43□□□□□ -0.9
HDLBP-242ENST00000488013 RHOFQ9HBH0 211 aa9.43□□□□□ -0.9
HDLBP-242ENST00000488013 DYNLRB1Q9NP97 96 aa9.43□□□□□ -0.9
HDLBP-242ENST00000488013 CBLN4Q9NTU7 201 aa9.43□□□□□ -0.9
HDLBP-242ENST00000488013 SPTAN1Q13813 2472 aaKnown RBP9.43□□□□□ -0.9
HDLBP-242ENST00000488013 TRAV8-7A0A075B6U6 113 aa9.42□□□□□ -0.9
HDLBP-242ENST00000488013 A1L4Q6 167 aa9.42□□□□□ -0.9
HDLBP-242ENST00000488013 LRP5LA4QPB2 252 aa9.42□□□□□ -0.9
HDLBP-242ENST00000488013 IFNL4K9M1U5 179 aa9.42□□□□□ -0.9
HDLBP-242ENST00000488013 AIPO00170 330 aa9.42□□□□□ -0.9
HDLBP-242ENST00000488013 ZNF780AO75290 641 aaPredicted RBP9.42□□□□□ -0.9
HDLBP-242ENST00000488013 MAS1P04201 325 aa9.42□□□□□ -0.9
HDLBP-242ENST00000488013 CD55P08174 381 aa9.42□□□□□ -0.9
HDLBP-242ENST00000488013 UBBP0CG47 229 aa9.42□□□□□ -0.9
HDLBP-242ENST00000488013 CD37P11049 281 aa9.42□□□□□ -0.9
HDLBP-242ENST00000488013 TNFRSF1AP19438 455 aa9.42□□□□□ -0.9
HDLBP-242ENST00000488013 ANOS1P23352 680 aa9.42□□□□□ -0.9
HDLBP-242ENST00000488013 PPOXP50336 477 aa9.42□□□□□ -0.9
HDLBP-242ENST00000488013 BMXP51813 675 aa9.42□□□□□ -0.9
HDLBP-242ENST00000488013 GPR176Q14439 515 aa9.42□□□□□ -0.9
HDLBP-242ENST00000488013 TESK1Q15569 626 aa9.42□□□□□ -0.9
HDLBP-242ENST00000488013 KISS1Q15726 138 aa9.42□□□□□ -0.9
HDLBP-242ENST00000488013 DGUOKQ16854 277 aa9.42□□□□□ -0.9
HDLBP-242ENST00000488013 SWI5Q1ZZU3 235 aa9.42□□□□□ -0.9
HDLBP-242ENST00000488013 FAM76BQ5HYJ3 339 aa9.42□□□□□ -0.9
HDLBP-242ENST00000488013 FAM27D1Q5T7N8 215 aa9.42□□□□□ -0.9
HDLBP-242ENST00000488013 DDI2Q5TDH0 399 aa9.42□□□□□ -0.9
HDLBP-242ENST00000488013 LRRTM1Q86UE6 522 aa9.42□□□□□ -0.9
HDLBP-242ENST00000488013 DTX2Q86UW9 622 aa9.42□□□□□ -0.9
HDLBP-242ENST00000488013 OR5AS1Q8N127 324 aa9.42□□□□□ -0.9
HDLBP-242ENST00000488013 ZSCAN4Q8NAM6 433 aaPredicted RBP9.42□□□□□ -0.9
HDLBP-242ENST00000488013 OR6M1Q8NGM8 313 aa9.42□□□□□ -0.9
HDLBP-242ENST00000488013 LILRB1Q8NHL6 650 aaPredicted RBP9.42□□□□□ -0.9
HDLBP-242ENST00000488013 GPER1Q99527 375 aa9.42□□□□□ -0.9
HDLBP-242ENST00000488013 S100A13Q99584 98 aa9.42□□□□□ -0.9
HDLBP-242ENST00000488013 NAA50Q9GZZ1 169 aaKnown RBP9.42□□□□□ -0.9
HDLBP-242ENST00000488013 PPIL3Q9H2H8 161 aaKnown RBP9.42□□□□□ -0.9
HDLBP-242ENST00000488013 TPK1Q9H3S4 243 aa9.42□□□□□ -0.9
HDLBP-242ENST00000488013 GPR173Q9NS66 373 aa9.42□□□□□ -0.9
HDLBP-242ENST00000488013 CCDC59Q9P031 241 aaKnown RBP9.42□□□□□ -0.9
HDLBP-242ENST00000488013 IL19Q9UHD0 177 aa9.42□□□□□ -0.9
HDLBP-242ENST00000488013 FZR1Q9UM11 496 aa9.42□□□□□ -0.9
HDLBP-242ENST00000488013 POLDIP2Q9Y2S7 368 aa9.42□□□□□ -0.9
HDLBP-242ENST00000488013 IGKV1-9A0A0C4DH69 117 aa9.41□□□□□ -0.9
HDLBP-242ENST00000488013 PQLC2LA1A4F0 135 aa9.41□□□□□ -0.9
HDLBP-242ENST00000488013 A6NIN4 97 aa9.41□□□□□ -0.9
HDLBP-242ENST00000488013 IFITM5A6NNB3 132 aa9.41□□□□□ -0.9
HDLBP-242ENST00000488013 C17orf100A8MU93 164 aa9.41□□□□□ -0.9
HDLBP-242ENST00000488013 H3BUI4 141 aa9.41□□□□□ -0.9
HDLBP-242ENST00000488013 SLC17A2O00624 439 aa9.41□□□□□ -0.9
HDLBP-242ENST00000488013 LMX1BO60663 402 aa9.41□□□□□ -0.9
HDLBP-242ENST00000488013 PTBP3O95758 552 aaKnown RBP9.41□□□□□ -0.9
HDLBP-242ENST00000488013 PLAUP00749 431 aa9.41□□□□□ -0.9
HDLBP-242ENST00000488013 ZNF182P17025 639 aaPredicted RBP9.41□□□□□ -0.9
HDLBP-242ENST00000488013 CD200P41217 278 aa9.41□□□□□ -0.9
HDLBP-242ENST00000488013 MAGEB1P43366 347 aa9.41□□□□□ -0.9
HDLBP-242ENST00000488013 TUSC1Q2TAM9 212 aa9.41□□□□□ -0.9
HDLBP-242ENST00000488013 CEP78Q5JTW2 689 aa9.41□□□□□ -0.9
HDLBP-242ENST00000488013 C1orf100Q5SVJ3 147 aa9.41□□□□□ -0.9
HDLBP-242ENST00000488013 LRP11Q86VZ4 500 aa9.41□□□□□ -0.9
HDLBP-242ENST00000488013 MKXQ8IYA7 352 aa9.41□□□□□ -0.9
HDLBP-242ENST00000488013 SAXO1Q8IYX7 474 aa9.41□□□□□ -0.9
HDLBP-242ENST00000488013 JAGN1Q8N5M9 183 aa9.41□□□□□ -0.9
HDLBP-242ENST00000488013 OR2Z1Q8NG97 314 aa9.41□□□□□ -0.9
HDLBP-242ENST00000488013 ZNF671Q8TAW3 534 aa9.41□□□□□ -0.9
HDLBP-242ENST00000488013 ELMOD3Q96FG2 381 aa9.41□□□□□ -0.9
HDLBP-242ENST00000488013 POM121Q96HA1 1249 aa9.41□□□□□ -0.9
HDLBP-242ENST00000488013 PKIBQ9C010 78 aa9.41□□□□□ -0.9
HDLBP-242ENST00000488013 RAB1BQ9H0U4 201 aa9.41□□□□□ -0.9
HDLBP-242ENST00000488013 PLGRKTQ9HBL7 147 aa9.41□□□□□ -0.9
HDLBP-242ENST00000488013 DECR2Q9NUI1 292 aa9.41□□□□□ -0.9
HDLBP-242ENST00000488013 ABRACLQ9P1F3 81 aa9.41□□□□□ -0.9
HDLBP-242ENST00000488013 PLEKHB1Q9UF11 243 aaPredicted RBP9.41□□□□□ -0.9
HDLBP-242ENST00000488013 A3GALT2U3KPV4 340 aa9.41□□□□□ -0.9
HDLBP-242ENST00000488013 FAM230AA0A1W2PPH8 454 aa9.4□□□□□ -0.9
HDLBP-242ENST00000488013 LRRC30A6NM36 301 aa9.4□□□□□ -0.9
HDLBP-242ENST00000488013 ZNF732B4DXR9 585 aa9.4□□□□□ -0.9
HDLBP-242ENST00000488013 BPNT1O95861 308 aa9.4□□□□□ -0.9
HDLBP-242ENST00000488013 ACAA1P09110 424 aaPredicted RBP9.4□□□□□ -0.9
HDLBP-242ENST00000488013 HTR2CP28335 458 aa9.4□□□□□ -0.9
HDLBP-242ENST00000488013 RPS19P39019 145 aaKnown RBP9.4□□□□□ -0.9
HDLBP-242ENST00000488013 PTGFRP43088 359 aa9.4□□□□□ -0.9
HDLBP-242ENST00000488013 ALDH3B1P43353 468 aa9.4□□□□□ -0.9
HDLBP-242ENST00000488013 GATA4P43694 442 aa9.4□□□□□ -0.9
HDLBP-242ENST00000488013 GPM6AP51674 278 aa9.4□□□□□ -0.9
HDLBP-242ENST00000488013 MRPS11P82912 194 aaKnown RBP9.4□□□□□ -0.9
HDLBP-242ENST00000488013 TNFAIP6P98066 277 aaPredicted RBP9.4□□□□□ -0.9
HDLBP-242ENST00000488013 RAB11BQ15907 218 aa9.4□□□□□ -0.9
HDLBP-242ENST00000488013 MSMPQ1L6U9 139 aa9.4□□□□□ -0.9
HDLBP-242ENST00000488013 MST1LQ2TV78 715 aa9.4□□□□□ -0.9
HDLBP-242ENST00000488013 ASPHD2Q6ICH7 369 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 201.4 ms