RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 WIPF3A6NGB9 483 aa11.24□□□□□ -0.61
VPS52-218ENST00000482399 TLX3O43711 291 aaPredicted RBP11.24□□□□□ -0.61
VPS52-218ENST00000482399 GUSBP08236 651 aa11.24□□□□□ -0.61
VPS52-218ENST00000482399 CD37P11049 281 aa11.24□□□□□ -0.61
VPS52-218ENST00000482399 GLP1RP43220 463 aa11.24□□□□□ -0.61
VPS52-218ENST00000482399 P2RY4P51582 365 aa11.24□□□□□ -0.61
VPS52-218ENST00000482399 KISS1Q15726 138 aa11.24□□□□□ -0.61
VPS52-218ENST00000482399 ZNF528Q3MIS6 628 aa11.24□□□□□ -0.61
VPS52-218ENST00000482399 ACTBL2Q562R1 376 aa11.24□□□□□ -0.61
VPS52-218ENST00000482399 DHRS7BQ6IAN0 325 aaPredicted RBP11.24□□□□□ -0.61
VPS52-218ENST00000482399 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.24□□□□□ -0.61
VPS52-218ENST00000482399 C17orf78Q8N4C9 275 aa11.24□□□□□ -0.61
VPS52-218ENST00000482399 ZFP62Q8NB50 900 aaPredicted RBP11.24□□□□□ -0.61
VPS52-218ENST00000482399 CCNL2Q96S94 520 aaPredicted RBP11.24□□□□□ -0.61
VPS52-218ENST00000482399 FAAP24Q9BTP7 215 aa11.24□□□□□ -0.61
VPS52-218ENST00000482399 ZNF442Q9H7R0 627 aa11.24□□□□□ -0.61
VPS52-218ENST00000482399 PIGLQ9Y2B2 252 aa11.24□□□□□ -0.61
VPS52-218ENST00000482399 CDRT15L2A8MXV6 281 aa11.24□□□□□ -0.61
VPS52-218ENST00000482399 H3BMH7 237 aa11.24□□□□□ -0.61
VPS52-218ENST00000482399 PHF1O43189 567 aaPredicted RBP11.24□□□□□ -0.61
VPS52-218ENST00000482399 YIF1AO95070 293 aa11.24□□□□□ -0.61
VPS52-218ENST00000482399 EN2P19622 333 aaPredicted RBP11.24□□□□□ -0.61
VPS52-218ENST00000482399 MYBPHQ13203 477 aa11.24□□□□□ -0.61
VPS52-218ENST00000482399 OR14K1Q8NGZ2 314 aa11.24□□□□□ -0.61
VPS52-218ENST00000482399 OR2AE1Q8NHA4 323 aa11.24□□□□□ -0.61
VPS52-218ENST00000482399 MRGPRFQ96AM1 343 aa11.24□□□□□ -0.61
VPS52-218ENST00000482399 PRRX2Q99811 253 aa11.24□□□□□ -0.61
VPS52-218ENST00000482399 GABRG3Q99928 467 aa11.24□□□□□ -0.61
VPS52-218ENST00000482399 NMES1Q9C002 83 aa11.24□□□□□ -0.61
VPS52-218ENST00000482399 RAB18Q9NP72 206 aa11.24□□□□□ -0.61
VPS52-218ENST00000482399 PADI1Q9ULC6 663 aa11.24□□□□□ -0.61
VPS52-218ENST00000482399 GPR132Q9UNW8 380 aa11.24□□□□□ -0.61
VPS52-218ENST00000482399 HSPB2A8KAH6 182 aa11.24□□□□□ -0.61
VPS52-218ENST00000482399 SCGNO76038 276 aa11.24□□□□□ -0.61
VPS52-218ENST00000482399 DDAH2O95865 285 aa11.24□□□□□ -0.61
VPS52-218ENST00000482399 OR5H8P0DN80 308 aa11.24□□□□□ -0.61
VPS52-218ENST00000482399 TUBG1P23258 451 aa11.24□□□□□ -0.61
VPS52-218ENST00000482399 TAS2R46P59540 309 aa11.24□□□□□ -0.61
VPS52-218ENST00000482399 HERV-K104P61576 105 aa11.24□□□□□ -0.61
VPS52-218ENST00000482399 VAMP2P63027 116 aa11.24□□□□□ -0.61
VPS52-218ENST00000482399 GNMTQ14749 295 aa11.24□□□□□ -0.61
VPS52-218ENST00000482399 PPA1Q15181 289 aa11.24□□□□□ -0.61
VPS52-218ENST00000482399 HSPB2Q16082 182 aa11.24□□□□□ -0.61
VPS52-218ENST00000482399 GGNBP1Q5YKI7 109 aa11.24□□□□□ -0.61
VPS52-218ENST00000482399 FAM166AQ6J272 317 aa11.24□□□□□ -0.61
VPS52-218ENST00000482399 RPUSD3Q6P087 351 aaKnown RBP11.24□□□□□ -0.61
VPS52-218ENST00000482399 ARRDC1Q8N5I2 433 aa11.24□□□□□ -0.61
VPS52-218ENST00000482399 WDSUB1Q8N9V3 476 aa11.24□□□□□ -0.61
VPS52-218ENST00000482399 TLCD2A6NGC4 264 aa11.23□□□□□ -0.61
VPS52-218ENST00000482399 MS4A18H0YCH9 400 aa11.23□□□□□ -0.61
VPS52-218ENST00000482399 DXOO77932 396 aaKnown RBP11.23□□□□□ -0.61
VPS52-218ENST00000482399 IFNA4P05014 189 aa11.23□□□□□ -0.61
VPS52-218ENST00000482399 DBHP09172 617 aa11.23□□□□□ -0.61
VPS52-218ENST00000482399 FOLR1P15328 257 aa11.23□□□□□ -0.61
VPS52-218ENST00000482399 EPHA1P21709 976 aa11.23□□□□□ -0.61
VPS52-218ENST00000482399 IGFBP4P22692 258 aa11.23□□□□□ -0.61
VPS52-218ENST00000482399 TMEM50BP56557 158 aa11.23□□□□□ -0.61
VPS52-218ENST00000482399 MS4A18Q3C1V0 323 aa11.23□□□□□ -0.61
VPS52-218ENST00000482399 C1orf100Q5SVJ3 147 aa11.23□□□□□ -0.61
VPS52-218ENST00000482399 RAET1LQ5VY80 246 aa11.23□□□□□ -0.61
VPS52-218ENST00000482399 KIAA0895LQ68EN5 471 aa11.23□□□□□ -0.61
VPS52-218ENST00000482399 ZNF784Q8NCA9 323 aaPredicted RBP11.23□□□□□ -0.61
VPS52-218ENST00000482399 ZNF721Q8TF20 911 aa11.23□□□□□ -0.61
VPS52-218ENST00000482399 EDEM2Q9BV94 578 aa11.23□□□□□ -0.61
VPS52-218ENST00000482399 KPTNQ9Y664 436 aa11.23□□□□□ -0.61
VPS52-218ENST00000482399 JTBO76095 146 aa11.23□□□□□ -0.61
VPS52-218ENST00000482399 OR2C1O95371 312 aa11.23□□□□□ -0.61
VPS52-218ENST00000482399 LCATP04180 440 aa11.23□□□□□ -0.61
VPS52-218ENST00000482399 IGFBP3P17936 291 aaPredicted RBP11.23□□□□□ -0.61
VPS52-218ENST00000482399 CSRP1P21291 193 aaKnown RBP11.23□□□□□ -0.61
VPS52-218ENST00000482399 GNRHRP30968 328 aa11.23□□□□□ -0.61
VPS52-218ENST00000482399 DVL1P1P54792 670 aaPredicted RBP11.23□□□□□ -0.61
VPS52-218ENST00000482399 RNF133Q8WVZ7 376 aa11.23□□□□□ -0.61
VPS52-218ENST00000482399 ASB10Q8WXI3 467 aa11.23□□□□□ -0.61
VPS52-218ENST00000482399 ERGIC1Q969X5 290 aa11.23□□□□□ -0.61
VPS52-218ENST00000482399 TMEM230Q96A57 120 aa11.23□□□□□ -0.61
VPS52-218ENST00000482399 CLDN16Q9Y5I7 305 aa11.23□□□□□ -0.61
VPS52-218ENST00000482399 ZNF727A8MUV8 499 aa11.22□□□□□ -0.61
VPS52-218ENST00000482399 CST7O76096 145 aa11.22□□□□□ -0.61
VPS52-218ENST00000482399 ONECUT2O95948 504 aa11.22□□□□□ -0.61
VPS52-218ENST00000482399 IGHV4-34P06331 123 aa11.22□□□□□ -0.61
VPS52-218ENST00000482399 PNLIPP16233 465 aa11.22□□□□□ -0.61
VPS52-218ENST00000482399 FPR2P25090 351 aa11.22□□□□□ -0.61
VPS52-218ENST00000482399 MMP16P51512 607 aa11.22□□□□□ -0.61
VPS52-218ENST00000482399 C17orf67Q0P5P2 114 aa11.22□□□□□ -0.61
VPS52-218ENST00000482399 HIST2H3AQ71DI3 136 aa11.22□□□□□ -0.61
VPS52-218ENST00000482399 STX12Q86Y82 276 aa11.22□□□□□ -0.61
VPS52-218ENST00000482399 WDFY1Q8IWB7 410 aa11.22□□□□□ -0.61
VPS52-218ENST00000482399 ZNF561Q8N587 486 aa11.22□□□□□ -0.61
VPS52-218ENST00000482399 LINC00469Q8N7U9 141 aa11.22□□□□□ -0.61
VPS52-218ENST00000482399 OR1L3Q8NH93 324 aa11.22□□□□□ -0.61
VPS52-218ENST00000482399 SLC22A8Q8TCC7 542 aa11.22□□□□□ -0.61
VPS52-218ENST00000482399 SH3BGRL3Q9H299 93 aa11.22□□□□□ -0.61
VPS52-218ENST00000482399 SLC26A1Q9H2B4 701 aa11.22□□□□□ -0.61
VPS52-218ENST00000482399 CYTL1Q9NRR1 136 aa11.22□□□□□ -0.61
VPS52-218ENST00000482399 SLC2A8Q9NY64 477 aa11.22□□□□□ -0.61
VPS52-218ENST00000482399 COA4Q9NYJ1 87 aa11.22□□□□□ -0.61
VPS52-218ENST00000482399 UBE2J1Q9Y385 318 aaPredicted RBP11.22□□□□□ -0.61
VPS52-218ENST00000482399 RBM7Q9Y580 266 aaKnown RBP11.22□□□□□ -0.61
VPS52-218ENST00000482399 A0A0A6YYD4 124 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms