RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 HES4Q9HCC6 221 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 MSL2Q9HCI7 577 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 ZNF275Q9NSD4 429 aaPredicted RBP4.29□□□□□ -1.72
HDAC6-223ENST00000480525 ACOXLQ9NUZ1 547 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 ERVK-18Q9QC07 812 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 RNF7Q9UBF6 113 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 LPAR3Q9UBY5 353 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 GNG8Q9UK08 70 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 ZNF281Q9Y2X9 895 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 LSM2Q9Y333 95 aaKnown RBP4.29□□□□□ -1.72
HDAC6-223ENST00000480525 LRRC42Q9Y546 428 aa4.29□□□□□ -1.72
HDAC6-223ENST00000480525 NIPBLQ6KC79 2804 aaeCLIP4.29□□□□□ -1.72
HDAC6-223ENST00000480525 SETD2Q9BYW2 2564 aaPredicted RBP4.28□□□□□ -1.72
HDAC6-223ENST00000480525 TRAV20A0A0B4J274 112 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 TRBV5-5A0A0J9YX44 114 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 LOC100289279A0A1B0GTE1 492 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 LOC107986453A0A1B0GWG9 222 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 PQLC2LA1A4F0 135 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 MEGF11A6BM72 1044 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 H3BUI4 141 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 J3QT63 122 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 LGALS8O00214 317 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 MYL12BO14950 172 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 TBX1O43435 398 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 RGS10O43665 173 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 NDUFS7O75251 213 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 FOXH1O75593 365 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 CLIC3O95833 236 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 ECDO95905 644 aaPredicted RBP4.28□□□□□ -1.72
HDAC6-223ENST00000480525 NRASP01111 189 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 IGHV2-5P01817 119 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 LIPFP07098 398 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 SLC2A1P11166 492 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 IRF2P14316 349 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 CA6P23280 308 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 KIR3DL2P43630 455 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 RBP2P50120 134 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 CAPZA1P52907 286 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 HCCSP53701 268 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 CAV3P56539 151 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 PRSS12P56730 875 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 OR12D2P58182 307 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 BPIFB3P59826 476 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 NANOS3P60323 173 aaKnown RBP4.28□□□□□ -1.72
HDAC6-223ENST00000480525 ERVK11-1P61568 191 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 LMO4P61968 165 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 KRTAP1-1Q07627 177 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 MLLT11Q13015 90 aaPredicted RBP4.28□□□□□ -1.72
HDAC6-223ENST00000480525 PRDX4Q13162 271 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 SCGB2A2Q13296 93 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 SPHARQ15513 63 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 SMN1Q16637 294 aaKnown RBP4.28□□□□□ -1.72
HDAC6-223ENST00000480525 TUSC1Q2TAM9 212 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 ALKBH6Q3KRA9 238 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 KRTAP21-3Q3LHN1 58 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 Q499Y3 187 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 NHLRC3Q5JS37 347 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 SPIN3Q5JUX0 258 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 ELP2Q6IA86 826 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 CD200R1LQ6Q8B3 271 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 WDR82Q6UXN9 313 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 C1orf122Q6ZSJ8 110 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 LHFPL2Q6ZUX7 228 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 NLRC3Q7RTR2 1065 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.28□□□□□ -1.72
HDAC6-223ENST00000480525 C11orf53Q8IXP5 236 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 STX19Q8N4C7 294 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 SVOPQ8N4V2 548 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 GCSAMQ8N6F7 178 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 NKAIN3Q8N8D7 197 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 PXT1Q8NFP0 134 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 OR1M1Q8NGA1 313 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 OR5D14Q8NGL3 314 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 OR8S1Q8NH09 359 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 OR5AK2Q8NH90 309 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 C8orf46Q8TAG6 207 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 ZNF671Q8TAW3 534 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 YIPF5Q969M3 257 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 DACT3Q96B18 629 aaPredicted RBP4.28□□□□□ -1.72
HDAC6-223ENST00000480525 MRPS24Q96EL2 167 aaKnown RBP4.28□□□□□ -1.72
HDAC6-223ENST00000480525 PGLYRP3Q96LB9 341 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 HIST1H2AAQ96QV6 131 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 PAPOLGQ9BWT3 736 aaKnown RBP4.28□□□□□ -1.72
HDAC6-223ENST00000480525 BPESC1Q9GZL8 116 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 FAM234AQ9H0X4 552 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 OR51I2Q9H344 312 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 NCOR1P1Q9H4R4 102 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 UNKLQ9H9P5 680 aaKnown RBP4.28□□□□□ -1.72
HDAC6-223ENST00000480525 PLEKHA1Q9HB21 404 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 PATZ1Q9HBE1 687 aaKnown RBP4.28□□□□□ -1.72
HDAC6-223ENST00000480525 IL36GQ9NZH8 169 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 GHRLQ9UBU3 117 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 MIOXQ9UGB7 285 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 FOXJ3Q9UPW0 622 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 PIGLQ9Y2B2 252 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 RHBDD3Q9Y3P4 386 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 WIPI2Q9Y4P8 454 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 MXRA5Q9NR99 2828 aa4.28□□□□□ -1.72
HDAC6-223ENST00000480525 TRBV2A0A0J9YWF9 115 aa4.27□□□□□ -1.73
HDAC6-223ENST00000480525 OOEPA6NGQ2 149 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms