RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 SERTM1A2A2V5 107 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 H3BMM0 161 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 SMPD2O60906 423 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 ONECUT2O95948 504 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 PF4P02776 101 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 HOXB5P09067 269 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 HOXD9P28356 352 aaPredicted RBP4.92□□□□□ -1.62
USF3-202ENST00000478658 EGR3Q06889 387 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 PLAG1Q6DJT9 500 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 LCN10Q6JVE6 187 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 CNIH2Q6PI25 160 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 PARM1Q6UWI2 310 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 GFRALQ6UXV0 394 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 OR52I1Q8NGK6 324 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 OR52I2Q8NH67 350 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 AKR7LQ8NHP1 331 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 YIPF6Q96EC8 236 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 APOOQ9BUR5 198 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 RBKSQ9H477 322 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 LIN28AQ9H9Z2 209 aaKnown RBP4.92□□□□□ -1.62
USF3-202ENST00000478658 PPIL1Q9Y3C6 166 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 TP53BP1Q12888 1972 aaPredicted RBP4.92□□□□□ -1.62
USF3-202ENST00000478658 C7orf66A4D0T2 115 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 CLDN34H7C241 214 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 MT-ND6P03923 174 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 SOD2P04179 222 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 GPX4P36969 197 aaPredicted RBP4.92□□□□□ -1.62
USF3-202ENST00000478658 CCR6P51684 374 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 STC1P52823 247 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 LIMK1P53667 647 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 SLC37A1P57057 533 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 KLF3P57682 345 aaPredicted RBP4.92□□□□□ -1.62
USF3-202ENST00000478658 ROM1Q03395 351 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 PLAC9Q5JTB6 97 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 SPANXN1Q5VSR9 72 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 KIAA1958Q8N8K9 716 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 TFAP2BQ92481 460 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 MRGPRX3Q96LB0 322 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 ZNF318Q5VUA4 2279 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 COCHO43405 550 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 HBZP02008 142 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 COX6B1P14854 86 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 EPHA8P29322 1005 aaPredicted RBP4.92□□□□□ -1.62
USF3-202ENST00000478658 MAS1LP35410 378 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 PPP1R8Q12972 351 aaKnown RBP4.92□□□□□ -1.62
USF3-202ENST00000478658 CST6Q15828 149 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 FAM106AQ4KMX7 169 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 CLEC6AQ6EIG7 209 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 LHFPL4Q7Z7J7 247 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 LRRTM3Q86VH5 581 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 CMTM8Q8IZV2 173 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 ZNF441Q8N8Z8 693 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 SARGQ9BW04 601 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 MRPL18Q9H0U6 180 aaKnown RBP4.92□□□□□ -1.62
USF3-202ENST00000478658 DUSP13Q9UII6 198 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 NUMBLQ9Y6R0 609 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 BAZ2AQ9UIF9 1905 aaKnown RBP4.92□□□□□ -1.62
USF3-202ENST00000478658 RIMS1Q86UR5 1692 aaKnown RBP4.92□□□□□ -1.62
USF3-202ENST00000478658 NRXN1Q9ULB1 1477 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 NUP205Q92621 2012 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 K7N7A8 449 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 SMAD9O15198 467 aaKnown RBP4.92□□□□□ -1.62
USF3-202ENST00000478658 GABRA1P14867 456 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 FPR3P25089 353 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 PCBP4P57723 403 aaKnown RBP4.92□□□□□ -1.62
USF3-202ENST00000478658 BTG1P62324 171 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 ARF6P62330 175 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 MBTPS1Q14703 1052 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 AANATQ16613 207 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 Q499Y3 187 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 SHISA5Q8N114 240 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 TMEM217Q8N7C4 229 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 OR6X1Q8NH79 312 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 TMEM45BQ96B21 275 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 TMEM19Q96HH6 336 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 SLC17A9Q9BYT1 436 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 HMX2A2RU54 273 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 CLEC18AA5D8T8 446 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 GLTPD2A6NH11 291 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 GPR32O75388 356 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 BGLAPP02818 100 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 FSTP19883 344 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 STARD6P59095 220 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 HAGHQ16775 308 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 TM4SF20Q53R12 229 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 SLCO4C1Q6ZQN7 724 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 CLEC18CQ8NCF0 446 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 OR51F2Q8NH61 342 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 APOBEC3DQ96AK3 386 aaPredicted RBP4.92□□□□□ -1.62
USF3-202ENST00000478658 SLC25A2Q9BXI2 301 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 KCNK7Q9Y2U2 307 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 PTGDR2Q9Y5Y4 395 aa4.92□□□□□ -1.62
USF3-202ENST00000478658 TDRD6O60522 2096 aaKnown RBP4.92□□□□□ -1.62
USF3-202ENST00000478658 AQP7P3A6NL99 342 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 GEMIN2O14893 280 aaKnown RBP4.91□□□□□ -1.62
USF3-202ENST00000478658 PRKRAO75569 313 aaKnown RBP4.91□□□□□ -1.62
USF3-202ENST00000478658 TMEM78Q5T7P6 136 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 OR6K2Q8NGY2 324 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 OR5AK3PQ8NH89 298 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 ST8SIA1Q92185 356 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms