RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 OR1N1Q8NGS0 311 aa12.23□□□□□ -0.45
HDAC1-206ENST00000476391 OR13G1Q8NGZ3 307 aa12.23□□□□□ -0.45
HDAC1-206ENST00000476391 RNASE8Q8TDE3 154 aaKnown RBP12.23□□□□□ -0.45
HDAC1-206ENST00000476391 HIPK2Q9H2X6 1198 aa12.23□□□□□ -0.45
HDAC1-206ENST00000476391 FAM230AA0A1W2PPH8 454 aa12.23□□□□□ -0.45
HDAC1-206ENST00000476391 PLRG1O43660 514 aaKnown RBP12.23□□□□□ -0.45
HDAC1-206ENST00000476391 HPRT1P00492 218 aa12.23□□□□□ -0.45
HDAC1-206ENST00000476391 VSIG8P0DPA2 414 aa12.23□□□□□ -0.45
HDAC1-206ENST00000476391 OR1D2P34982 312 aa12.23□□□□□ -0.45
HDAC1-206ENST00000476391 ALDH3B1P43353 468 aa12.23□□□□□ -0.45
HDAC1-206ENST00000476391 IDH3GP51553 393 aaPredicted RBP12.23□□□□□ -0.45
HDAC1-206ENST00000476391 CXCL17Q6UXB2 119 aa12.23□□□□□ -0.45
HDAC1-206ENST00000476391 SSX7Q7RTT5 188 aa12.23□□□□□ -0.45
HDAC1-206ENST00000476391 CMTM8Q8IZV2 173 aa12.23□□□□□ -0.45
HDAC1-206ENST00000476391 LIPHQ8WWY8 451 aa12.23□□□□□ -0.45
HDAC1-206ENST00000476391 PYGO2Q9BRQ0 406 aa12.23□□□□□ -0.45
HDAC1-206ENST00000476391 P4HTMQ9NXG6 502 aa12.23□□□□□ -0.45
HDAC1-206ENST00000476391 GRHPRQ9UBQ7 328 aa12.23□□□□□ -0.45
HDAC1-206ENST00000476391 APOBEC3BQ9UH17 382 aaKnown RBP12.23□□□□□ -0.45
HDAC1-206ENST00000476391 C14orf166Q9Y224 244 aaKnown RBP12.23□□□□□ -0.45
HDAC1-206ENST00000476391 CDC14CA4D256 554 aa12.22□□□□□ -0.45
HDAC1-206ENST00000476391 MYADML2A6NDP7 307 aa12.22□□□□□ -0.45
HDAC1-206ENST00000476391 SCGB1D1O95968 90 aa12.22□□□□□ -0.45
HDAC1-206ENST00000476391 SCGB1D2O95969 90 aa12.22□□□□□ -0.45
HDAC1-206ENST00000476391 MBPP02686 304 aaPredicted RBP12.22□□□□□ -0.45
HDAC1-206ENST00000476391 CPMP14384 443 aa12.22□□□□□ -0.45
HDAC1-206ENST00000476391 HSD11B1P28845 292 aa12.22□□□□□ -0.45
HDAC1-206ENST00000476391 GABRA3P34903 492 aa12.22□□□□□ -0.45
HDAC1-206ENST00000476391 BTN3A2P78410 334 aa12.22□□□□□ -0.45
HDAC1-206ENST00000476391 TMEM241Q24JQ0 296 aa12.22□□□□□ -0.45
HDAC1-206ENST00000476391 COL5A1-AS1Q5SY13 56 aa12.22□□□□□ -0.45
HDAC1-206ENST00000476391 C1QL3Q5VWW1 255 aa12.22□□□□□ -0.45
HDAC1-206ENST00000476391 SLC18B1Q6NT16 456 aa12.22□□□□□ -0.45
HDAC1-206ENST00000476391 KCTD18Q6PI47 426 aaPredicted RBP12.22□□□□□ -0.45
HDAC1-206ENST00000476391 ZAR1Q86SH2 424 aa12.22□□□□□ -0.45
HDAC1-206ENST00000476391 OR2I1PQ8NGU4 316 aa12.22□□□□□ -0.45
HDAC1-206ENST00000476391 C20orf144Q9BQM9 153 aa12.22□□□□□ -0.45
HDAC1-206ENST00000476391 MIEN1Q9BRT3 115 aa12.22□□□□□ -0.45
HDAC1-206ENST00000476391 AK3Q9UIJ7 227 aa12.22□□□□□ -0.45
HDAC1-206ENST00000476391 ARID1AO14497 2285 aa12.22□□□□□ -0.45
HDAC1-206ENST00000476391 TSPAN2O60636 221 aa12.22□□□□□ -0.45
HDAC1-206ENST00000476391 ISG15P05161 165 aa12.22□□□□□ -0.45
HDAC1-206ENST00000476391 SELEP16581 610 aa12.22□□□□□ -0.45
HDAC1-206ENST00000476391 HNF1AP20823 631 aa12.22□□□□□ -0.45
HDAC1-206ENST00000476391 PTGER4P35408 488 aa12.22□□□□□ -0.45
HDAC1-206ENST00000476391 ZNF266Q14584 549 aa12.22□□□□□ -0.45
HDAC1-206ENST00000476391 IL13RA2Q14627 380 aa12.22□□□□□ -0.45
HDAC1-206ENST00000476391 LEMD1Q68G75 181 aa12.22□□□□□ -0.45
HDAC1-206ENST00000476391 OR2G3Q8NGZ4 309 aa12.22□□□□□ -0.45
HDAC1-206ENST00000476391 CLDND2Q8NHS1 167 aa12.22□□□□□ -0.45
HDAC1-206ENST00000476391 WFIKKN1Q96NZ8 548 aa12.22□□□□□ -0.45
HDAC1-206ENST00000476391 OR2J1Q9GZK6 312 aa12.22□□□□□ -0.45
HDAC1-206ENST00000476391 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.22□□□□□ -0.45
HDAC1-206ENST00000476391 NAGKQ9UJ70 344 aa12.22□□□□□ -0.45
HDAC1-206ENST00000476391 CHTOPQ9Y3Y2 248 aaKnown RBP12.22□□□□□ -0.45
HDAC1-206ENST00000476391 LRRK1Q38SD2 2015 aa12.22□□□□□ -0.45
HDAC1-206ENST00000476391 NSG1A0A0A6YYJ2 146 aa12.21□□□□□ -0.45
HDAC1-206ENST00000476391 A8MVM7 634 aa12.21□□□□□ -0.45
HDAC1-206ENST00000476391 UMODP07911 640 aa12.21□□□□□ -0.45
HDAC1-206ENST00000476391 TMEM11P17152 192 aa12.21□□□□□ -0.45
HDAC1-206ENST00000476391 PPM1AP35813 382 aa12.21□□□□□ -0.45
HDAC1-206ENST00000476391 ECI1P42126 302 aa12.21□□□□□ -0.45
HDAC1-206ENST00000476391 OR3A2P47893 321 aa12.21□□□□□ -0.45
HDAC1-206ENST00000476391 SLC11A1P49279 550 aa12.21□□□□□ -0.45
HDAC1-206ENST00000476391 SLC37A1P57057 533 aa12.21□□□□□ -0.45
HDAC1-206ENST00000476391 ZNF66Q6ZN08 573 aa12.21□□□□□ -0.45
HDAC1-206ENST00000476391 ZNF765Q7L2R6 523 aa12.21□□□□□ -0.45
HDAC1-206ENST00000476391 NUFIP2Q7Z417 695 aaKnown RBP12.21□□□□□ -0.45
HDAC1-206ENST00000476391 TMEM170AQ8WVE7 144 aa12.21□□□□□ -0.45
HDAC1-206ENST00000476391 HAS2Q92819 552 aa12.21□□□□□ -0.45
HDAC1-206ENST00000476391 EXTL1Q92935 676 aa12.21□□□□□ -0.45
HDAC1-206ENST00000476391 FAM122AQ96E09 287 aa12.21□□□□□ -0.45
HDAC1-206ENST00000476391 MSL2Q9HCI7 577 aa12.21□□□□□ -0.45
HDAC1-206ENST00000476391 B9D1Q9UPM9 204 aa12.21□□□□□ -0.45
HDAC1-206ENST00000476391 A0A1W2PN81 502 aa12.21□□□□□ -0.46
HDAC1-206ENST00000476391 H7C1C5 153 aa12.21□□□□□ -0.46
HDAC1-206ENST00000476391 HBE1P02100 147 aa12.21□□□□□ -0.46
HDAC1-206ENST00000476391 CHRNA7P36544 502 aa12.21□□□□□ -0.46
HDAC1-206ENST00000476391 ELLP55199 621 aaPredicted RBP12.21□□□□□ -0.46
HDAC1-206ENST00000476391 TAS2R46P59540 309 aa12.21□□□□□ -0.46
HDAC1-206ENST00000476391 LCN6P62502 163 aa12.21□□□□□ -0.46
HDAC1-206ENST00000476391 CHRFAM7AQ494W8 412 aa12.21□□□□□ -0.46
HDAC1-206ENST00000476391 PTCRAQ6ISU1 281 aaPredicted RBP12.21□□□□□ -0.46
HDAC1-206ENST00000476391 ARMC6Q6NXE6 501 aa12.21□□□□□ -0.46
HDAC1-206ENST00000476391 OR4N5Q8IXE1 308 aa12.21□□□□□ -0.46
HDAC1-206ENST00000476391 MAML2Q8IZL2 1156 aaPredicted RBP12.21□□□□□ -0.46
HDAC1-206ENST00000476391 SLC22A24Q8N4F4 322 aa12.21□□□□□ -0.46
HDAC1-206ENST00000476391 AGBL5Q8NDL9 886 aa12.21□□□□□ -0.46
HDAC1-206ENST00000476391 NUS1Q96E22 293 aa12.21□□□□□ -0.46
HDAC1-206ENST00000476391 ZNF700Q9H0M5 742 aa12.21□□□□□ -0.46
HDAC1-206ENST00000476391 C20orf202A1L168 122 aa12.2□□□□□ -0.46
HDAC1-206ENST00000476391 TMEM14DPA8MWL7 114 aa12.2□□□□□ -0.46
HDAC1-206ENST00000476391 B4E171 279 aa12.2□□□□□ -0.46
HDAC1-206ENST00000476391 K7EP13 123 aa12.2□□□□□ -0.46
HDAC1-206ENST00000476391 KNG1P01042 644 aa12.2□□□□□ -0.46
HDAC1-206ENST00000476391 TNFSF10P50591 281 aa12.2□□□□□ -0.46
HDAC1-206ENST00000476391 LBX1P52954 281 aa12.2□□□□□ -0.46
HDAC1-206ENST00000476391 EMP2P54851 167 aa12.2□□□□□ -0.46
HDAC1-206ENST00000476391 SELENOTP62341 195 aa12.2□□□□□ -0.46
HDAC1-206ENST00000476391 RPL23AP62750 156 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms