RNA–Protein interactions for RNA: ENST00000448789.2

RAB5B-202, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB5B, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-202ENST00000448789 CD40P25942 277 aa12.89□□□□□ -0.35
RAB5B-202ENST00000448789 PTBP1P26599 531 aaKnown RBP eCLIP12.89□□□□□ -0.354e-8■■■■■ 36.6
RAB5B-202ENST00000448789 RAD52P43351 418 aa12.89□□□□□ -0.35
RAB5B-202ENST00000448789 PTH2RP49190 550 aa12.89□□□□□ -0.35
RAB5B-202ENST00000448789 SNTB2Q13425 540 aaKnown RBP12.89□□□□□ -0.35
RAB5B-202ENST00000448789 FBXL19-AS1Q494R0 122 aa12.89□□□□□ -0.35
RAB5B-202ENST00000448789 RNASE12Q5GAN4 147 aaKnown RBP12.89□□□□□ -0.35
RAB5B-202ENST00000448789 ZDHHC23Q8IYP9 409 aa12.89□□□□□ -0.35
RAB5B-202ENST00000448789 GDPD1Q8N9F7 314 aa12.89□□□□□ -0.35
RAB5B-202ENST00000448789 OR10K1Q8NGX5 313 aa12.89□□□□□ -0.35
RAB5B-202ENST00000448789 LILRB4Q8NHJ6 448 aa12.89□□□□□ -0.35
RAB5B-202ENST00000448789 PRR7Q8TB68 274 aa12.89□□□□□ -0.35
RAB5B-202ENST00000448789 BORCS8Q96FH0 119 aa12.89□□□□□ -0.35
RAB5B-202ENST00000448789 WFIKKN1Q96NZ8 548 aa12.89□□□□□ -0.35
RAB5B-202ENST00000448789 BCL2L14Q9BZR8 327 aa12.89□□□□□ -0.35
RAB5B-202ENST00000448789 OR10A4Q9H209 315 aa12.89□□□□□ -0.35
RAB5B-202ENST00000448789 COQ3Q9NZJ6 369 aa12.89□□□□□ -0.35
RAB5B-202ENST00000448789 RELNP78509 3460 aa12.88□□□□□ -0.35
RAB5B-202ENST00000448789 A0A1W2PQ09 198 aa12.88□□□□□ -0.35
RAB5B-202ENST00000448789 PQLC2LA1A4F0 135 aa12.88□□□□□ -0.35
RAB5B-202ENST00000448789 IQCF6A8MYZ5 107 aa12.88□□□□□ -0.35
RAB5B-202ENST00000448789 SPRY1O43609 319 aaPredicted RBP12.88□□□□□ -0.35
RAB5B-202ENST00000448789 ANGPTL7O43827 346 aa12.88□□□□□ -0.35
RAB5B-202ENST00000448789 PRB1P04280 392 aa12.88□□□□□ -0.35
RAB5B-202ENST00000448789 RBP2P50120 134 aa12.88□□□□□ -0.35
RAB5B-202ENST00000448789 FUT6P51993 359 aa12.88□□□□□ -0.35
RAB5B-202ENST00000448789 NKX6-1P78426 367 aaPredicted RBP12.88□□□□□ -0.35
RAB5B-202ENST00000448789 ZNF181Q2M3W8 571 aa12.88□□□□□ -0.35
RAB5B-202ENST00000448789 MOGAT2Q3SYC2 334 aa12.88□□□□□ -0.35
RAB5B-202ENST00000448789 PYHIN1Q6K0P9 492 aa12.88□□□□□ -0.35
RAB5B-202ENST00000448789 LHFPL2Q6ZUX7 228 aa12.88□□□□□ -0.35
RAB5B-202ENST00000448789 RTN4RL2Q86UN3 420 aa12.88□□□□□ -0.35
RAB5B-202ENST00000448789 Q8N402 240 aa12.88□□□□□ -0.35
RAB5B-202ENST00000448789 PNLDC1Q8NA58 520 aaKnown RBP12.88□□□□□ -0.35
RAB5B-202ENST00000448789 ITPKCQ96DU7 683 aa12.88□□□□□ -0.35
RAB5B-202ENST00000448789 S100A16Q96FQ6 103 aaKnown RBP12.88□□□□□ -0.35
RAB5B-202ENST00000448789 CYYR1Q96J86 154 aa12.88□□□□□ -0.35
RAB5B-202ENST00000448789 USB1Q9BQ65 265 aaKnown RBP12.88□□□□□ -0.35
RAB5B-202ENST00000448789 ATG5Q9H1Y0 275 aa12.88□□□□□ -0.35
RAB5B-202ENST00000448789 BANF2Q9H503 90 aa12.88□□□□□ -0.35
RAB5B-202ENST00000448789 ERRFI1Q9UJM3 462 aaPredicted RBP12.88□□□□□ -0.35
RAB5B-202ENST00000448789 SLC7A11Q9UPY5 501 aa12.88□□□□□ -0.35
RAB5B-202ENST00000448789 SMG1Q96Q15 3661 aaKnown RBP12.88□□□□□ -0.35
RAB5B-202ENST00000448789 A0A0A6YYD4 124 aa12.88□□□□□ -0.35
RAB5B-202ENST00000448789 IGKV1-12A0A0C4DH73 117 aa12.88□□□□□ -0.35
RAB5B-202ENST00000448789 DPRXA6NFQ7 191 aa12.88□□□□□ -0.35
RAB5B-202ENST00000448789 WIPF3A6NGB9 483 aa12.88□□□□□ -0.35
RAB5B-202ENST00000448789 ANKRD30BLA7E2S9 258 aa12.88□□□□□ -0.35
RAB5B-202ENST00000448789 LANCL1O43813 399 aa12.88□□□□□ -0.35
RAB5B-202ENST00000448789 IGKV1D-12P01611 117 aa12.88□□□□□ -0.35
RAB5B-202ENST00000448789 HLA-DQB1P01920 261 aa12.88□□□□□ -0.35
RAB5B-202ENST00000448789 CRYAAP02489 173 aa12.88□□□□□ -0.35
RAB5B-202ENST00000448789 ALDH3B1P43353 468 aa12.88□□□□□ -0.35
RAB5B-202ENST00000448789 FABP6P51161 128 aa12.88□□□□□ -0.35
RAB5B-202ENST00000448789 GPM6AP51674 278 aa12.88□□□□□ -0.35
RAB5B-202ENST00000448789 TAS2R20P59543 309 aa12.88□□□□□ -0.35
RAB5B-202ENST00000448789 DGCR2P98153 550 aa12.88□□□□□ -0.35
RAB5B-202ENST00000448789 CEACAM21Q3KPI0 293 aa12.88□□□□□ -0.35
RAB5B-202ENST00000448789 SLC22A6Q4U2R8 563 aa12.88□□□□□ -0.35
RAB5B-202ENST00000448789 C1QTNF12Q5T7M4 302 aa12.88□□□□□ -0.35
RAB5B-202ENST00000448789 MTFR2Q6P444 385 aa12.88□□□□□ -0.35
RAB5B-202ENST00000448789 CALHM1Q8IU99 346 aa12.88□□□□□ -0.35
RAB5B-202ENST00000448789 GALNT11Q8NCW6 608 aa12.88□□□□□ -0.35
RAB5B-202ENST00000448789 OR5P3Q8WZ94 311 aa12.88□□□□□ -0.35
RAB5B-202ENST00000448789 RNASE6Q93091 150 aaKnown RBP12.88□□□□□ -0.35
RAB5B-202ENST00000448789 ITFG2Q969R8 447 aa12.88□□□□□ -0.35
RAB5B-202ENST00000448789 TECTBQ96PL2 329 aa12.88□□□□□ -0.35
RAB5B-202ENST00000448789 NICN1Q9BSH3 213 aa12.88□□□□□ -0.35
RAB5B-202ENST00000448789 AUNIPQ9H7T9 357 aa12.88□□□□□ -0.35
RAB5B-202ENST00000448789 FBLN5Q9UBX5 448 aa12.88□□□□□ -0.35
RAB5B-202ENST00000448789 PURGQ9UJV8 347 aaKnown RBP12.88□□□□□ -0.35
RAB5B-202ENST00000448789 ING4Q9UNL4 249 aa12.88□□□□□ -0.35
RAB5B-202ENST00000448789 CDC14BO60729 498 aa12.87□□□□□ -0.35
RAB5B-202ENST00000448789 MPIG6BO95866 241 aa12.87□□□□□ -0.35
RAB5B-202ENST00000448789 TMEM225BP0DP42 221 aa12.87□□□□□ -0.35
RAB5B-202ENST00000448789 RAB6AP20340 208 aa12.87□□□□□ -0.35
RAB5B-202ENST00000448789 NR4A2P43354 598 aa12.87□□□□□ -0.35
RAB5B-202ENST00000448789 ATP1B3P54709 279 aa12.87□□□□□ -0.35
RAB5B-202ENST00000448789 TMEM69Q5SWH9 247 aa12.87□□□□□ -0.35
RAB5B-202ENST00000448789 OR2W3Q7Z3T1 314 aa12.87□□□□□ -0.35
RAB5B-202ENST00000448789 LRP11Q86VZ4 500 aa12.87□□□□□ -0.35
RAB5B-202ENST00000448789 FTMTQ8N4E7 242 aa12.87□□□□□ -0.35
RAB5B-202ENST00000448789 ACBD4Q8NC06 268 aa12.87□□□□□ -0.35
RAB5B-202ENST00000448789 TRIM63Q969Q1 353 aa12.87□□□□□ -0.35
RAB5B-202ENST00000448789 PTX4Q96A99 478 aa12.87□□□□□ -0.35
RAB5B-202ENST00000448789 RADILQ96JH8 1075 aa12.87□□□□□ -0.35
RAB5B-202ENST00000448789 LPAR5Q9H1C0 372 aa12.87□□□□□ -0.35
RAB5B-202ENST00000448789 NEK6Q9HC98 313 aa12.87□□□□□ -0.35
RAB5B-202ENST00000448789 MRPL15Q9P015 296 aaKnown RBP12.87□□□□□ -0.35
RAB5B-202ENST00000448789 RAB22AQ9UL26 194 aa12.87□□□□□ -0.35
RAB5B-202ENST00000448789 TBC1D24Q9ULP9 559 aa12.87□□□□□ -0.35
RAB5B-202ENST00000448789 MPC1Q9Y5U8 109 aa12.87□□□□□ -0.35
RAB5B-202ENST00000448789 CADP27708 2225 aa12.86□□□□□ -0.35
RAB5B-202ENST00000448789 A0A1B0GUH1 482 aa12.86□□□□□ -0.35
RAB5B-202ENST00000448789 LINC00854A0A1B0GVQ3 168 aa12.86□□□□□ -0.35
RAB5B-202ENST00000448789 ZNF732B4DXR9 585 aa12.86□□□□□ -0.35
RAB5B-202ENST00000448789 H0YL77 283 aa12.86□□□□□ -0.35
RAB5B-202ENST00000448789 XRCC3O43542 346 aa12.86□□□□□ -0.35
RAB5B-202ENST00000448789 CRTAPO75718 401 aaPredicted RBP12.86□□□□□ -0.35
RAB5B-202ENST00000448789 KITLGP21583 273 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms