RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 BAXQ07812 192 aa3.61□□□□□ -1.83
LSM5-205ENST00000409952 Q1RN00 199 aa3.61□□□□□ -1.83
LSM5-205ENST00000409952 TTC32Q5I0X7 151 aa3.61□□□□□ -1.83
LSM5-205ENST00000409952 FBXW12Q6X9E4 464 aa3.61□□□□□ -1.83
LSM5-205ENST00000409952 RNF165Q6ZSG1 346 aa3.61□□□□□ -1.83
LSM5-205ENST00000409952 C10orf67Q8IYJ2 551 aa3.61□□□□□ -1.83
LSM5-205ENST00000409952 HS3ST5Q8IZT8 346 aa3.61□□□□□ -1.83
LSM5-205ENST00000409952 KLHL30-AS1Q8NEE0 82 aa3.61□□□□□ -1.83
LSM5-205ENST00000409952 TTLQ8NG68 377 aa3.61□□□□□ -1.83
LSM5-205ENST00000409952 PHOSPHO2Q8TCD6 241 aa3.61□□□□□ -1.83
LSM5-205ENST00000409952 DNAJC19Q96DA6 116 aa3.61□□□□□ -1.83
LSM5-205ENST00000409952 SMIM19Q96E16 107 aa3.61□□□□□ -1.83
LSM5-205ENST00000409952 RBP7Q96R05 134 aa3.61□□□□□ -1.83
LSM5-205ENST00000409952 ATOH8Q96SQ7 321 aa3.61□□□□□ -1.83
LSM5-205ENST00000409952 TMED9Q9BVK6 235 aa3.61□□□□□ -1.83
LSM5-205ENST00000409952 TOLLIPQ9H0E2 274 aa3.61□□□□□ -1.83
LSM5-205ENST00000409952 ARL6Q9H0F7 186 aa3.61□□□□□ -1.83
LSM5-205ENST00000409952 PARP12Q9H0J9 701 aaKnown RBP3.61□□□□□ -1.83
LSM5-205ENST00000409952 MFSD1Q9H3U5 465 aa3.61□□□□□ -1.83
LSM5-205ENST00000409952 RHOFQ9HBH0 211 aa3.61□□□□□ -1.83
LSM5-205ENST00000409952 FBXO6Q9NRD1 293 aaPredicted RBP3.61□□□□□ -1.83
LSM5-205ENST00000409952 TMEM100Q9NV29 134 aa3.61□□□□□ -1.83
LSM5-205ENST00000409952 RBM22Q9NW64 420 aaKnown RBP eCLIP3.61□□□□□ -1.83
LSM5-205ENST00000409952 LRRC42Q9Y546 428 aa3.61□□□□□ -1.83
LSM5-205ENST00000409952 HEBP2Q9Y5Z4 205 aa3.61□□□□□ -1.83
LSM5-205ENST00000409952 POGZQ7Z3K3 1410 aa3.61□□□□□ -1.83
LSM5-205ENST00000409952 CAMTA1Q9Y6Y1 1673 aa3.6□□□□□ -1.83
LSM5-205ENST00000409952 A0A087WYN8 130 aa3.6□□□□□ -1.83
LSM5-205ENST00000409952 IGHV1-69DA0A0B4J2H0 117 aa3.6□□□□□ -1.83
LSM5-205ENST00000409952 F5H5K5 113 aa3.6□□□□□ -1.83
LSM5-205ENST00000409952 CCRL2O00421 344 aa3.6□□□□□ -1.83
LSM5-205ENST00000409952 MYL12BO14950 172 aa3.6□□□□□ -1.83
LSM5-205ENST00000409952 MAGEB4O15481 346 aaPredicted RBP3.6□□□□□ -1.83
LSM5-205ENST00000409952 TGOLN2O43493 480 aa3.6□□□□□ -1.83
LSM5-205ENST00000409952 SSNA1O43805 119 aa3.6□□□□□ -1.83
LSM5-205ENST00000409952 GLSO94925 669 aaPredicted RBP3.6□□□□□ -1.83
LSM5-205ENST00000409952 ASS1P00966 412 aaKnown RBP3.6□□□□□ -1.83
LSM5-205ENST00000409952 UGT2B7P16662 529 aa3.6□□□□□ -1.83
LSM5-205ENST00000409952 KRTAP5-9P26371 169 aa3.6□□□□□ -1.83
LSM5-205ENST00000409952 MEOX2P50222 304 aa3.6□□□□□ -1.83
LSM5-205ENST00000409952 SYNJ2BPP57105 145 aa3.6□□□□□ -1.83
LSM5-205ENST00000409952 UBE2NP61088 152 aaKnown RBP3.6□□□□□ -1.83
LSM5-205ENST00000409952 B2MP61769 119 aa3.6□□□□□ -1.83
LSM5-205ENST00000409952 INCA1Q0VD86 236 aa3.6□□□□□ -1.83
LSM5-205ENST00000409952 CEACAM16Q2WEN9 425 aa3.6□□□□□ -1.83
LSM5-205ENST00000409952 SLC25A35Q3KQZ1 300 aa3.6□□□□□ -1.83
LSM5-205ENST00000409952 ACTBL2Q562R1 376 aa3.6□□□□□ -1.83
LSM5-205ENST00000409952 CLVS2Q5SYC1 327 aa3.6□□□□□ -1.83
LSM5-205ENST00000409952 ZC2HC1BQ5TFG8 222 aa3.6□□□□□ -1.83
LSM5-205ENST00000409952 HHATQ5VTY9 493 aa3.6□□□□□ -1.83
LSM5-205ENST00000409952 METTL21CQ5VZV1 264 aa3.6□□□□□ -1.83
LSM5-205ENST00000409952 DNM1P34Q6PK57 102 aa3.6□□□□□ -1.83
LSM5-205ENST00000409952 CASP12Q6UXS9 341 aa3.6□□□□□ -1.83
LSM5-205ENST00000409952 LGI3Q8N145 548 aa3.6□□□□□ -1.83
LSM5-205ENST00000409952 C19orf18Q8NEA5 215 aa3.6□□□□□ -1.83
LSM5-205ENST00000409952 OR13G1Q8NGZ3 307 aa3.6□□□□□ -1.83
LSM5-205ENST00000409952 OR1S1Q8NH92 325 aa3.6□□□□□ -1.83
LSM5-205ENST00000409952 ACTRT1Q8TDG2 376 aa3.6□□□□□ -1.83
LSM5-205ENST00000409952 SMARCD1Q96GM5 515 aa3.6□□□□□ -1.83
LSM5-205ENST00000409952 KCTD7Q96MP8 289 aa3.6□□□□□ -1.83
LSM5-205ENST00000409952 RILPQ96NA2 401 aa3.6□□□□□ -1.83
LSM5-205ENST00000409952 MRPS26Q9BYN8 205 aaKnown RBP3.6□□□□□ -1.83
LSM5-205ENST00000409952 SLC19A3Q9BZV2 496 aa3.6□□□□□ -1.83
LSM5-205ENST00000409952 TMEM27Q9HBJ8 222 aa3.6□□□□□ -1.83
LSM5-205ENST00000409952 SLC40A1Q9NP59 571 aa3.6□□□□□ -1.83
LSM5-205ENST00000409952 DIABLOQ9NR28 239 aa3.6□□□□□ -1.83
LSM5-205ENST00000409952 TAS2R13Q9NYV9 303 aa3.6□□□□□ -1.83
LSM5-205ENST00000409952 COMMD9Q9P000 198 aa3.6□□□□□ -1.83
LSM5-205ENST00000409952 PCYOX1Q9UHG3 505 aa3.6□□□□□ -1.83
LSM5-205ENST00000409952 KLK13Q9UKR3 277 aa3.6□□□□□ -1.83
LSM5-205ENST00000409952 HES2Q9Y543 173 aa3.6□□□□□ -1.83
LSM5-205ENST00000409952 ORC6Q9Y5N6 252 aa3.6□□□□□ -1.83
LSM5-205ENST00000409952 THSD7BQ9C0I4 1608 aa3.59□□□□□ -1.83
LSM5-205ENST00000409952 TRAV8-6A0A0B4J262 113 aa3.59□□□□□ -1.83
LSM5-205ENST00000409952 TMEM114B3SHH9 223 aa3.59□□□□□ -1.83
LSM5-205ENST00000409952 PFDN6O15212 129 aa3.59□□□□□ -1.83
LSM5-205ENST00000409952 SEMA3DO95025 777 aa3.59□□□□□ -1.83
LSM5-205ENST00000409952 LYPLA2O95372 231 aa3.59□□□□□ -1.83
LSM5-205ENST00000409952 PCCAP05165 728 aaPredicted RBP3.59□□□□□ -1.83
LSM5-205ENST00000409952 CTSLP07711 333 aa3.59□□□□□ -1.83
LSM5-205ENST00000409952 RPS17P08708 135 aaKnown RBP3.59□□□□□ -1.83
LSM5-205ENST00000409952 ZDHHC11BP0C7U3 371 aa3.59□□□□□ -1.83
LSM5-205ENST00000409952 SLC2A1P11166 492 aa3.59□□□□□ -1.83
LSM5-205ENST00000409952 FOLR2P14207 255 aa3.59□□□□□ -1.83
LSM5-205ENST00000409952 PSMB9P28065 219 aa3.59□□□□□ -1.83
LSM5-205ENST00000409952 GCLMP48507 274 aa3.59□□□□□ -1.83
LSM5-205ENST00000409952 RIPPLY3P57055 190 aa3.59□□□□□ -1.83
LSM5-205ENST00000409952 NUP107P57740 925 aa3.59□□□□□ -1.83
LSM5-205ENST00000409952 HERVK_113P61574 105 aa3.59□□□□□ -1.83
LSM5-205ENST00000409952 SHHQ15465 462 aa3.59□□□□□ -1.83
LSM5-205ENST00000409952 KRTAP24-1Q3LI83 254 aa3.59□□□□□ -1.83
LSM5-205ENST00000409952 ARL9Q6T311 187 aa3.59□□□□□ -1.83
LSM5-205ENST00000409952 PLET1Q6UQ28 207 aa3.59□□□□□ -1.83
LSM5-205ENST00000409952 UGT2A3Q6UWM9 527 aa3.59□□□□□ -1.83
LSM5-205ENST00000409952 RTL4Q6ZR62 310 aa3.59□□□□□ -1.83
LSM5-205ENST00000409952 STX12Q86Y82 276 aa3.59□□□□□ -1.83
LSM5-205ENST00000409952 SLC13A5Q86YT5 568 aaPredicted RBP3.59□□□□□ -1.83
LSM5-205ENST00000409952 WDFY1Q8IWB7 410 aa3.59□□□□□ -1.83
LSM5-205ENST00000409952 ZNF525Q8N782 197 aa3.59□□□□□ -1.83
LSM5-205ENST00000409952 POM121L12Q8N7R1 296 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms