RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 BRD3OSQ6XYD6 125 aa11.39□□□□□ -0.59
CXCL12-205ENST00000395794 MOB3CQ70IA8 216 aa11.39□□□□□ -0.59
CXCL12-205ENST00000395794 BCDIN3DQ7Z5W3 292 aaKnown RBP11.39□□□□□ -0.59
CXCL12-205ENST00000395794 CMTM4Q8IZR5 234 aa11.39□□□□□ -0.59
CXCL12-205ENST00000395794 OR5A2Q8NGI9 324 aa11.39□□□□□ -0.59
CXCL12-205ENST00000395794 ZNF671Q8TAW3 534 aa11.39□□□□□ -0.59
CXCL12-205ENST00000395794 GATAD2BQ8WXI9 593 aa11.39□□□□□ -0.59
CXCL12-205ENST00000395794 MED30Q96HR3 178 aa11.39□□□□□ -0.59
CXCL12-205ENST00000395794 ZNF48Q96MX3 618 aaPredicted RBP11.39□□□□□ -0.59
CXCL12-205ENST00000395794 CIB1Q99828 191 aa11.39□□□□□ -0.59
CXCL12-205ENST00000395794 OSBPL10Q9BXB5 764 aa11.39□□□□□ -0.59
CXCL12-205ENST00000395794 DNTTIP1Q9H147 329 aa11.39□□□□□ -0.59
CXCL12-205ENST00000395794 SEMA6AQ9H2E6 1030 aa11.39□□□□□ -0.59
CXCL12-205ENST00000395794 RIBC2Q9H4K1 309 aa11.39□□□□□ -0.59
CXCL12-205ENST00000395794 ADGRL4Q9HBW9 690 aa11.39□□□□□ -0.59
CXCL12-205ENST00000395794 CLN6Q9NWW5 311 aa11.39□□□□□ -0.59
CXCL12-205ENST00000395794 WARS2Q9UGM6 360 aaKnown RBP11.39□□□□□ -0.59
CXCL12-205ENST00000395794 NUFIP1Q9UHK0 495 aaKnown RBP11.39□□□□□ -0.59
CXCL12-205ENST00000395794 RPUSD1Q9UJJ7 312 aaKnown RBP11.39□□□□□ -0.59
CXCL12-205ENST00000395794 COPS3Q9UNS2 423 aa11.39□□□□□ -0.59
CXCL12-205ENST00000395794 PIGLQ9Y2B2 252 aa11.39□□□□□ -0.59
CXCL12-205ENST00000395794 ORC6Q9Y5N6 252 aa11.39□□□□□ -0.59
CXCL12-205ENST00000395794 OR5B21A6NL26 309 aa11.38□□□□□ -0.59
CXCL12-205ENST00000395794 ZNF732B4DXR9 585 aa11.38□□□□□ -0.59
CXCL12-205ENST00000395794 AKR7A2O43488 359 aa11.38□□□□□ -0.59
CXCL12-205ENST00000395794 KRT8P05787 483 aa11.38□□□□□ -0.59
CXCL12-205ENST00000395794 HKR1P10072 659 aa11.38□□□□□ -0.59
CXCL12-205ENST00000395794 GLRA1P23415 457 aa11.38□□□□□ -0.59
CXCL12-205ENST00000395794 EPHA2P29317 976 aa11.38□□□□□ -0.59
CXCL12-205ENST00000395794 EFNB1P98172 346 aa11.38□□□□□ -0.59
CXCL12-205ENST00000395794 SLC9A3R2Q15599 337 aa11.38□□□□□ -0.59
CXCL12-205ENST00000395794 AWAT1Q58HT5 328 aa11.38□□□□□ -0.59
CXCL12-205ENST00000395794 FAM76BQ5HYJ3 339 aa11.38□□□□□ -0.59
CXCL12-205ENST00000395794 CEP78Q5JTW2 689 aa11.38□□□□□ -0.59
CXCL12-205ENST00000395794 ZNF684Q5T5D7 378 aa11.38□□□□□ -0.59
CXCL12-205ENST00000395794 ATPAF1Q5TC12 328 aaPredicted RBP11.38□□□□□ -0.59
CXCL12-205ENST00000395794 PLCXD3Q63HM9 321 aa11.38□□□□□ -0.59
CXCL12-205ENST00000395794 STUMQ69YW2 141 aa11.38□□□□□ -0.59
CXCL12-205ENST00000395794 FAM216BQ8N7L0 139 aa11.38□□□□□ -0.59
CXCL12-205ENST00000395794 OR5T2Q8NGG2 359 aa11.38□□□□□ -0.59
CXCL12-205ENST00000395794 OR51G2Q8NGK0 314 aa11.38□□□□□ -0.59
CXCL12-205ENST00000395794 HPSE2Q8WWQ2 592 aa11.38□□□□□ -0.59
CXCL12-205ENST00000395794 RFKQ969G6 155 aa11.38□□□□□ -0.59
CXCL12-205ENST00000395794 RAB3IPQ96QF0 476 aaPredicted RBP11.38□□□□□ -0.59
CXCL12-205ENST00000395794 APOL4Q9BPW4 351 aa11.38□□□□□ -0.59
CXCL12-205ENST00000395794 RBM4BQ9BQ04 359 aaKnown RBP11.38□□□□□ -0.59
CXCL12-205ENST00000395794 NOX4Q9NPH5 578 aa11.38□□□□□ -0.59
CXCL12-205ENST00000395794 SNTG1Q9NSN8 517 aa11.38□□□□□ -0.59
CXCL12-205ENST00000395794 ONECUT1Q9UBC0 465 aa11.38□□□□□ -0.59
CXCL12-205ENST00000395794 OR52A1Q9UKL2 312 aa11.38□□□□□ -0.59
CXCL12-205ENST00000395794 OAZ3Q9UMX2 235 aa11.38□□□□□ -0.59
CXCL12-205ENST00000395794 SNX5Q9Y5X3 404 aa11.38□□□□□ -0.59
CXCL12-205ENST00000395794 R4GMQ9 66 aa11.38□□□□□ -0.59
CXCL12-205ENST00000395794 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.37□□□□□ -0.59
CXCL12-205ENST00000395794 DHRS3O75911 302 aa11.37□□□□□ -0.59
CXCL12-205ENST00000395794 NRASP01111 189 aa11.37□□□□□ -0.59
CXCL12-205ENST00000395794 FAHP16930 419 aa11.37□□□□□ -0.59
CXCL12-205ENST00000395794 HTR1FP30939 366 aa11.37□□□□□ -0.59
CXCL12-205ENST00000395794 CDC42P60953 191 aa11.37□□□□□ -0.59
CXCL12-205ENST00000395794 IL13RA1P78552 427 aa11.37□□□□□ -0.59
CXCL12-205ENST00000395794 MFGE8Q08431 387 aaPredicted RBP11.37□□□□□ -0.59
CXCL12-205ENST00000395794 DEFB112Q30KQ8 113 aa11.37□□□□□ -0.59
CXCL12-205ENST00000395794 CDONQ4KMG0 1287 aa11.37□□□□□ -0.59
CXCL12-205ENST00000395794 CCDC121Q6ZUS5 278 aa11.37□□□□□ -0.59
CXCL12-205ENST00000395794 C10orf67Q8IYJ2 551 aa11.37□□□□□ -0.59
CXCL12-205ENST00000395794 YIPF7Q8N8F6 280 aa11.37□□□□□ -0.59
CXCL12-205ENST00000395794 OR8J1Q8NGP2 316 aa11.37□□□□□ -0.59
CXCL12-205ENST00000395794 H1FXQ92522 213 aaKnown RBP11.37□□□□□ -0.59
CXCL12-205ENST00000395794 LHX4Q969G2 390 aa11.37□□□□□ -0.59
CXCL12-205ENST00000395794 TMIGD2Q96BF3 282 aa11.37□□□□□ -0.59
CXCL12-205ENST00000395794 SEH1LQ96EE3 360 aa11.37□□□□□ -0.59
CXCL12-205ENST00000395794 DMRTB1Q96MA1 342 aa11.37□□□□□ -0.59
CXCL12-205ENST00000395794 TBX15Q96SF7 602 aa11.37□□□□□ -0.59
CXCL12-205ENST00000395794 WDR13Q9H1Z4 485 aa11.37□□□□□ -0.59
CXCL12-205ENST00000395794 OR51I2Q9H344 312 aa11.37□□□□□ -0.59
CXCL12-205ENST00000395794 IMPAD1Q9NX62 359 aa11.37□□□□□ -0.59
CXCL12-205ENST00000395794 NLKQ9UBE8 527 aa11.37□□□□□ -0.59
CXCL12-205ENST00000395794 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.37□□□□□ -0.59
CXCL12-205ENST00000395794 SOX21Q9Y651 276 aaPredicted RBP11.37□□□□□ -0.59
CXCL12-205ENST00000395794 KPTNQ9Y664 436 aa11.37□□□□□ -0.59
CXCL12-205ENST00000395794 IGHV1-69DA0A0B4J2H0 117 aa11.36□□□□□ -0.59
CXCL12-205ENST00000395794 CENPVL3A0A0U1RRI6 287 aa11.36□□□□□ -0.59
CXCL12-205ENST00000395794 A0A1B0GVI7 797 aa11.36□□□□□ -0.59
CXCL12-205ENST00000395794 MDFIC2A0A1B0GVS7 189 aa11.36□□□□□ -0.59
CXCL12-205ENST00000395794 SAC3D1A6NKF1 404 aa11.36□□□□□ -0.59
CXCL12-205ENST00000395794 OR2AT4A6NND4 320 aa11.36□□□□□ -0.59
CXCL12-205ENST00000395794 PRR32B1ATL7 298 aa11.36□□□□□ -0.59
CXCL12-205ENST00000395794 HOXA3O43365 443 aaPredicted RBP11.36□□□□□ -0.59
CXCL12-205ENST00000395794 IGHV1-69P01742 117 aa11.36□□□□□ -0.59
CXCL12-205ENST00000395794 TTRP02766 147 aa11.36□□□□□ -0.59
CXCL12-205ENST00000395794 CRYBA1P05813 215 aa11.36□□□□□ -0.59
CXCL12-205ENST00000395794 OR2T7P0C7T2 308 aa11.36□□□□□ -0.59
CXCL12-205ENST00000395794 MMP9P14780 707 aa11.36□□□□□ -0.59
CXCL12-205ENST00000395794 GABRA2P47869 451 aa11.36□□□□□ -0.59
CXCL12-205ENST00000395794 TGM4P49221 684 aa11.36□□□□□ -0.59
CXCL12-205ENST00000395794 TMED1Q13445 227 aa11.36□□□□□ -0.59
CXCL12-205ENST00000395794 CLVS2Q5SYC1 327 aa11.36□□□□□ -0.59
CXCL12-205ENST00000395794 RUSC1-AS1Q66K80 236 aa11.36□□□□□ -0.59
CXCL12-205ENST00000395794 C16orf87Q6PH81 154 aa11.36□□□□□ -0.59
CXCL12-205ENST00000395794 HAGHLQ6PII5 290 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms