RNA–Protein interactions for RNA: ENST00000395066.7

CLK3-202, Transcript of CDC like kinase 3, humanhuman

TSL 1 (best) BASIC

Gene CLK3, Length 2,621 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-202ENST00000395066 KNG1P01042 644 aa18.12■□□□□ 0.49
CLK3-202ENST00000395066 GSTP1P09211 210 aaKnown RBP18.12■□□□□ 0.49
CLK3-202ENST00000395066 FAHP16930 419 aa18.12■□□□□ 0.49
CLK3-202ENST00000395066 SNU13P55769 128 aaKnown RBP18.12■□□□□ 0.49
CLK3-202ENST00000395066 CSNK2A1P68400 391 aaPredicted RBP18.12■□□□□ 0.49
CLK3-202ENST00000395066 CARFQ8N187 725 aa18.12■□□□□ 0.49
CLK3-202ENST00000395066 CSNK2A3Q8NEV1 391 aa18.12■□□□□ 0.49
CLK3-202ENST00000395066 FANCFQ9NPI8 374 aa18.12■□□□□ 0.49
CLK3-202ENST00000395066 EHFQ9NZC4 300 aa18.12■□□□□ 0.49
CLK3-202ENST00000395066 IGKV1D-8A0A087WSZ0 117 aa18.12■□□□□ 0.49
CLK3-202ENST00000395066 OR5H15A6NDH6 313 aa18.12■□□□□ 0.49
CLK3-202ENST00000395066 ZNF726A6NNF4 738 aa18.12■□□□□ 0.49
CLK3-202ENST00000395066 RNASEK-C17orf49H0YIS7 233 aa18.12■□□□□ 0.49
CLK3-202ENST00000395066 LINC01387J3KSC0 135 aa18.12■□□□□ 0.49
CLK3-202ENST00000395066 EIF3GO75821 320 aaKnown RBP eCLIP18.12■□□□□ 0.49
CLK3-202ENST00000395066 SFTA3P0C7M3 94 aa18.12■□□□□ 0.49
CLK3-202ENST00000395066 RAB32Q13637 225 aa18.12■□□□□ 0.49
CLK3-202ENST00000395066 KISS1Q15726 138 aa18.12■□□□□ 0.49
CLK3-202ENST00000395066 CPEB2Q7Z5Q1 589 aaKnown RBP18.12■□□□□ 0.49
CLK3-202ENST00000395066 PIGTQ969N2 578 aa18.12■□□□□ 0.49
CLK3-202ENST00000395066 SLC5A7Q9GZV3 580 aa18.12■□□□□ 0.49
CLK3-202ENST00000395066 ZNF205O95201 554 aa18.11■□□□□ 0.49
CLK3-202ENST00000395066 OR3A2P47893 321 aa18.11■□□□□ 0.49
CLK3-202ENST00000395066 S100A10P60903 97 aa18.11■□□□□ 0.49
CLK3-202ENST00000395066 VAX1Q5SQQ9 334 aa18.11■□□□□ 0.49
CLK3-202ENST00000395066 ARRDC1Q8N5I2 433 aa18.11■□□□□ 0.49
CLK3-202ENST00000395066 PNLDC1Q8NA58 520 aaKnown RBP18.11■□□□□ 0.49
CLK3-202ENST00000395066 OR14K1Q8NGZ2 314 aa18.11■□□□□ 0.49
CLK3-202ENST00000395066 PGAM5Q96HS1 289 aa18.11■□□□□ 0.49
CLK3-202ENST00000395066 OR10A2Q9H208 303 aa18.11■□□□□ 0.49
CLK3-202ENST00000395066 COLCA2A8K830 154 aa18.11■□□□□ 0.49
CLK3-202ENST00000395066 ETV2O00321 342 aaPredicted RBP18.11■□□□□ 0.49
CLK3-202ENST00000395066 CSTBP04080 98 aaKnown RBP18.11■□□□□ 0.49
CLK3-202ENST00000395066 HPNP05981 417 aa18.11■□□□□ 0.49
CLK3-202ENST00000395066 DBHP09172 617 aa18.11■□□□□ 0.49
CLK3-202ENST00000395066 BLVRBP30043 206 aaPredicted RBP18.11■□□□□ 0.49
CLK3-202ENST00000395066 LPAR6P43657 344 aa18.11■□□□□ 0.49
CLK3-202ENST00000395066 AFF3P51826 1226 aaKnown RBP18.11■□□□□ 0.49
CLK3-202ENST00000395066 SHBQ15464 509 aa18.11■□□□□ 0.49
CLK3-202ENST00000395066 ZNF775Q96BV0 537 aaPredicted RBP18.11■□□□□ 0.49
CLK3-202ENST00000395066 RASL10BQ96S79 203 aa18.11■□□□□ 0.49
CLK3-202ENST00000395066 HDHD3Q9BSH5 251 aaPredicted RBP18.11■□□□□ 0.49
CLK3-202ENST00000395066 MOB1AQ9H8S9 216 aa18.11■□□□□ 0.49
CLK3-202ENST00000395066 CEACAM18A8MTB9 384 aa18.1■□□□□ 0.49
CLK3-202ENST00000395066 LRP3O75074 770 aa18.1■□□□□ 0.49
CLK3-202ENST00000395066 PTGFRP43088 359 aa18.1■□□□□ 0.49
CLK3-202ENST00000395066 UBE2V2Q15819 145 aa18.1■□□□□ 0.49
CLK3-202ENST00000395066 KMT5CQ86Y97 462 aa18.1■□□□□ 0.49
CLK3-202ENST00000395066 OR56B1Q8NGI3 324 aa18.1■□□□□ 0.49
CLK3-202ENST00000395066 OR6X1Q8NH79 312 aa18.1■□□□□ 0.49
CLK3-202ENST00000395066 RNF138Q8WVD3 245 aa18.1■□□□□ 0.49
CLK3-202ENST00000395066 SPSB2Q99619 263 aa18.1■□□□□ 0.49
CLK3-202ENST00000395066 ZNF701Q9NV72 531 aaPredicted RBP18.1■□□□□ 0.49
CLK3-202ENST00000395066 ANAPC10Q9UM13 185 aa18.1■□□□□ 0.49
CLK3-202ENST00000395066 MED6O75586 246 aa18.1■□□□□ 0.49
CLK3-202ENST00000395066 ACTBL2Q562R1 376 aa18.1■□□□□ 0.49
CLK3-202ENST00000395066 SLC25A53Q5H9E4 307 aa18.1■□□□□ 0.49
CLK3-202ENST00000395066 RABEPKQ7Z6M1 372 aa18.1■□□□□ 0.49
CLK3-202ENST00000395066 OXGR1Q96P68 337 aa18.1■□□□□ 0.49
CLK3-202ENST00000395066 ZNF581Q9P0T4 197 aa18.1■□□□□ 0.49
CLK3-202ENST00000395066 PCDHGA1Q9Y5H4 931 aa18.1■□□□□ 0.49
CLK3-202ENST00000395066 A0A1W2PQM1 296 aa18.09■□□□□ 0.49
CLK3-202ENST00000395066 ZFAND5O76080 213 aa18.09■□□□□ 0.49
CLK3-202ENST00000395066 SFTPBP07988 381 aa18.09■□□□□ 0.49
CLK3-202ENST00000395066 ACAA1P09110 424 aaPredicted RBP18.09■□□□□ 0.49
CLK3-202ENST00000395066 RCC1P18754 421 aaPredicted RBP18.09■□□□□ 0.49
CLK3-202ENST00000395066 RAB5BP61020 215 aa18.09■□□□□ 0.49
CLK3-202ENST00000395066 RBM39Q14498 530 aaKnown RBP18.09■□□□□ 0.49
CLK3-202ENST00000395066 EIF5AL1Q6IS14 154 aaKnown RBP18.09■□□□□ 0.49
CLK3-202ENST00000395066 DOK3Q7L591 496 aa18.09■□□□□ 0.49
CLK3-202ENST00000395066 OR5L2Q8NGL0 311 aa18.09■□□□□ 0.49
CLK3-202ENST00000395066 C2orf50Q96LR7 162 aa18.09■□□□□ 0.49
CLK3-202ENST00000395066 SLC26A1Q9H2B4 701 aa18.09■□□□□ 0.49
CLK3-202ENST00000395066 RNF122Q9H9V4 155 aa18.09■□□□□ 0.49
CLK3-202ENST00000395066 TAF9BQ9HBM6 251 aa18.09■□□□□ 0.49
CLK3-202ENST00000395066 DNAJB11Q9UBS4 358 aa18.09■□□□□ 0.49
CLK3-202ENST00000395066 MASP2O00187 686 aa18.09■□□□□ 0.49
CLK3-202ENST00000395066 PET100P0DJ07 73 aa18.09■□□□□ 0.49
CLK3-202ENST00000395066 FOLR2P14207 255 aa18.09■□□□□ 0.49
CLK3-202ENST00000395066 EIF5AP63241 154 aaKnown RBP18.09■□□□□ 0.49
CLK3-202ENST00000395066 HABP2Q14520 560 aaPredicted RBP18.09■□□□□ 0.49
CLK3-202ENST00000395066 RPL7L1Q6DKI1 246 aaKnown RBP18.09■□□□□ 0.49
CLK3-202ENST00000395066 C6orf201Q7Z4U5 140 aa18.09■□□□□ 0.49
CLK3-202ENST00000395066 ZNF385AQ96PM9 386 aaKnown RBP18.09■□□□□ 0.49
CLK3-202ENST00000395066 OCSTAMPQ9BR26 566 aa18.09■□□□□ 0.49
CLK3-202ENST00000395066 URM1Q9BTM9 101 aaKnown RBP18.09■□□□□ 0.49
CLK3-202ENST00000395066 EDARQ9UNE0 448 aa18.09■□□□□ 0.49
CLK3-202ENST00000395066 CACNA1EQ15878 2313 aa18.09■□□□□ 0.49
CLK3-202ENST00000395066 FCGR2AP12318 317 aa18.08■□□□□ 0.49
CLK3-202ENST00000395066 NME2P22392 152 aa18.08■□□□□ 0.49
CLK3-202ENST00000395066 FPR2P25090 351 aa18.08■□□□□ 0.49
CLK3-202ENST00000395066 SNRPEP62304 92 aaKnown RBP18.08■□□□□ 0.49
CLK3-202ENST00000395066 NAXEQ8NCW5 288 aa18.08■□□□□ 0.49
CLK3-202ENST00000395066 SSC4DQ8WTU2 575 aa18.08■□□□□ 0.49
CLK3-202ENST00000395066 UCN2Q96RP3 112 aa18.08■□□□□ 0.49
CLK3-202ENST00000395066 ZNF160Q9HCG1 818 aa18.08■□□□□ 0.49
CLK3-202ENST00000395066 AGPAT2O15120 278 aa18.08■□□□□ 0.48
CLK3-202ENST00000395066 SERPINA5P05154 406 aa18.08■□□□□ 0.48
CLK3-202ENST00000395066 CD5P06127 495 aa18.08■□□□□ 0.48
CLK3-202ENST00000395066 GABRR1P24046 479 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms