RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 LPCAT3Q6P1A2 487 aa16.34■□□□□ 0.21
USP49-202ENST00000373010 COQ8AQ8NI60 647 aa16.34■□□□□ 0.21
USP49-202ENST00000373010 PHB2Q99623 299 aa16.34■□□□□ 0.21
USP49-202ENST00000373010 MRPS18CQ9Y3D5 142 aaKnown RBP16.34■□□□□ 0.21
USP49-202ENST00000373010 OR6C6A6NF89 314 aa16.34■□□□□ 0.21
USP49-202ENST00000373010 NEURL1O76050 574 aa16.34■□□□□ 0.21
USP49-202ENST00000373010 ZNF250P15622 560 aa16.34■□□□□ 0.21
USP49-202ENST00000373010 CDCP2Q5VXM1 449 aa16.34■□□□□ 0.21
USP49-202ENST00000373010 FAHD2BQ6P2I3 314 aaPredicted RBP16.34■□□□□ 0.21
USP49-202ENST00000373010 SLC16A14Q7RTX9 510 aa16.34■□□□□ 0.21
USP49-202ENST00000373010 OR5H2Q8NGV7 314 aa16.34■□□□□ 0.21
USP49-202ENST00000373010 ANGPTL6Q8NI99 470 aa16.34■□□□□ 0.21
USP49-202ENST00000373010 C10orf35Q96D05 121 aa16.34■□□□□ 0.21
USP49-202ENST00000373010 FAHD2AQ96GK7 314 aa16.34■□□□□ 0.21
USP49-202ENST00000373010 WNT5BQ9H1J7 359 aa16.34■□□□□ 0.21
USP49-202ENST00000373010 BOKQ9UMX3 212 aaPredicted RBP16.34■□□□□ 0.21
USP49-202ENST00000373010 FAM230AA0A1W2PPH8 454 aa16.33■□□□□ 0.2
USP49-202ENST00000373010 SDCBPO00560 298 aaPredicted RBP16.33■□□□□ 0.2
USP49-202ENST00000373010 CYTIPO60759 359 aa16.33■□□□□ 0.2
USP49-202ENST00000373010 B3GALNT1O75752 331 aa16.33■□□□□ 0.2
USP49-202ENST00000373010 PLATP00750 562 aa16.33■□□□□ 0.2
USP49-202ENST00000373010 TMEM225BP0DP42 221 aa16.33■□□□□ 0.2
USP49-202ENST00000373010 PI3P19957 117 aa16.33■□□□□ 0.2
USP49-202ENST00000373010 MTCP1P56278 107 aa16.33■□□□□ 0.2
USP49-202ENST00000373010 AANATQ16613 207 aa16.33■□□□□ 0.2
USP49-202ENST00000373010 GALNTL5Q7Z4T8 443 aa16.33■□□□□ 0.2
USP49-202ENST00000373010 SKA3Q8IX90 412 aa16.33■□□□□ 0.2
USP49-202ENST00000373010 OR2M7Q8NG81 312 aa16.33■□□□□ 0.2
USP49-202ENST00000373010 OR2H1Q9GZK4 316 aa16.33■□□□□ 0.2
USP49-202ENST00000373010 RYDENQ9NUL5 291 aaKnown RBP16.33■□□□□ 0.2
USP49-202ENST00000373010 CDX4O14627 284 aaPredicted RBP16.33■□□□□ 0.2
USP49-202ENST00000373010 ANGPTL7O43827 346 aa16.33■□□□□ 0.2
USP49-202ENST00000373010 PDGFAP04085 211 aa16.33■□□□□ 0.2
USP49-202ENST00000373010 GABRR1P24046 479 aa16.33■□□□□ 0.2
USP49-202ENST00000373010 MPGP29372 298 aa16.33■□□□□ 0.2
USP49-202ENST00000373010 ATP1B3P54709 279 aa16.33■□□□□ 0.2
USP49-202ENST00000373010 SNU13P55769 128 aaKnown RBP16.33■□□□□ 0.2
USP49-202ENST00000373010 ZNF528Q3MIS6 628 aa16.33■□□□□ 0.2
USP49-202ENST00000373010 ACTBL2Q562R1 376 aa16.33■□□□□ 0.2
USP49-202ENST00000373010 CSNK2A3Q8NEV1 391 aa16.33■□□□□ 0.2
USP49-202ENST00000373010 PPP1R1CQ8WVI7 109 aa16.33■□□□□ 0.2
USP49-202ENST00000373010 CPNE4Q96A23 557 aaPredicted RBP16.33■□□□□ 0.2
USP49-202ENST00000373010 TM2D1Q9BX74 207 aa16.33■□□□□ 0.2
USP49-202ENST00000373010 C5orf66Q9H5L9 145 aa16.33■□□□□ 0.2
USP49-202ENST00000373010 PLA2G3Q9NZ20 509 aa16.33■□□□□ 0.2
USP49-202ENST00000373010 KIF25Q9UIL4 384 aa16.33■□□□□ 0.2
USP49-202ENST00000373010 SPRY1O43609 319 aaPredicted RBP16.32■□□□□ 0.2
USP49-202ENST00000373010 HTR3BO95264 441 aa16.32■□□□□ 0.2
USP49-202ENST00000373010 HLA-GP17693 338 aa16.32■□□□□ 0.2
USP49-202ENST00000373010 CBX5P45973 191 aa16.32■□□□□ 0.2
USP49-202ENST00000373010 BAMBIQ13145 260 aa16.32■□□□□ 0.2
USP49-202ENST00000373010 CAMK2BQ13554 666 aa16.32■□□□□ 0.2
USP49-202ENST00000373010 ATXN7L3Q14CW9 347 aaPredicted RBP16.32■□□□□ 0.2
USP49-202ENST00000373010 ABHD17BQ5VST6 288 aa16.32■□□□□ 0.2
USP49-202ENST00000373010 ZNF660Q6AZW8 331 aaPredicted RBP16.32■□□□□ 0.2
USP49-202ENST00000373010 C6orf201Q7Z4U5 140 aa16.32■□□□□ 0.2
USP49-202ENST00000373010 ARRDC1Q8N5I2 433 aa16.32■□□□□ 0.2
USP49-202ENST00000373010 CCDC54Q8NEL0 328 aa16.32■□□□□ 0.2
USP49-202ENST00000373010 OR13G1Q8NGZ3 307 aa16.32■□□□□ 0.2
USP49-202ENST00000373010 CXorf58Q96LI9 332 aa16.32■□□□□ 0.2
USP49-202ENST00000373010 MICU1Q9BPX6 476 aa16.32■□□□□ 0.2
USP49-202ENST00000373010 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.32■□□□□ 0.26e-7■■■■□ 25.9
USP49-202ENST00000373010 COMMD9Q9P000 198 aa16.32■□□□□ 0.2
USP49-202ENST00000373010 GPR132Q9UNW8 380 aa16.32■□□□□ 0.2
USP49-202ENST00000373010 TIMM10BQ9Y5J6 103 aa16.32■□□□□ 0.2
USP49-202ENST00000373010 IGKV1-27A0A075B6S5 117 aa16.31■□□□□ 0.2
USP49-202ENST00000373010 TUBAL3A6NHL2 446 aa16.31■□□□□ 0.2
USP49-202ENST00000373010 EEF1E1-BLOC1S5C9J1V9 151 aa16.31■□□□□ 0.2
USP49-202ENST00000373010 SPDEFO95238 335 aa16.31■□□□□ 0.2
USP49-202ENST00000373010 DUS4LO95620 317 aaKnown RBP16.31■□□□□ 0.2
USP49-202ENST00000373010 FGL1Q08830 312 aa16.31■□□□□ 0.2
USP49-202ENST00000373010 RIPPLY1Q0D2K3 151 aa16.31■□□□□ 0.2
USP49-202ENST00000373010 CCDC28AQ8IWP9 274 aa16.31■□□□□ 0.2
USP49-202ENST00000373010 SCARB1Q8WTV0 552 aa16.31■□□□□ 0.2
USP49-202ENST00000373010 TMEM230Q96A57 120 aa16.31■□□□□ 0.2
USP49-202ENST00000373010 FAM173AQ9BQD7 235 aa16.31■□□□□ 0.2
USP49-202ENST00000373010 RDH8Q9NYR8 311 aa16.31■□□□□ 0.2
USP49-202ENST00000373010 KNTC1P50748 2209 aa16.31■□□□□ 0.2
USP49-202ENST00000373010 FAM166BA8MTA8 275 aa16.31■□□□□ 0.2
USP49-202ENST00000373010 NMBP08949 121 aa16.31■□□□□ 0.2
USP49-202ENST00000373010 CPT2P23786 658 aa16.31■□□□□ 0.2
USP49-202ENST00000373010 OR3A2P47893 321 aa16.31■□□□□ 0.2
USP49-202ENST00000373010 KRTAP27-1Q3LI81 207 aa16.31■□□□□ 0.2
USP49-202ENST00000373010 C11orf87Q6NUJ2 197 aa16.31■□□□□ 0.2
USP49-202ENST00000373010 SULF2Q8IWU5 870 aa16.31■□□□□ 0.2
USP49-202ENST00000373010 OR6K3Q8NGY3 331 aa16.31■□□□□ 0.2
USP49-202ENST00000373010 C1QTNF6Q9BXI9 259 aa16.31■□□□□ 0.2
USP49-202ENST00000373010 ZNF703Q9H7S9 590 aaPredicted RBP16.31■□□□□ 0.2
USP49-202ENST00000373010 FREM1Q5H8C1 2179 aa16.3■□□□□ 0.2
USP49-202ENST00000373010 MED13Q9UHV7 2174 aa16.3■□□□□ 0.2
USP49-202ENST00000373010 ITGA3P26006 1051 aa16.3■□□□□ 0.2
USP49-202ENST00000373010 AGTR1P30556 359 aa16.3■□□□□ 0.2
USP49-202ENST00000373010 TAS2R31P59538 309 aa16.3■□□□□ 0.2
USP49-202ENST00000373010 NKAPLQ5M9Q1 402 aa16.3■□□□□ 0.2
USP49-202ENST00000373010 PLA2G2CQ5R387 149 aa16.3■□□□□ 0.2
USP49-202ENST00000373010 RIPPLY2Q5TAB7 128 aa16.3■□□□□ 0.2
USP49-202ENST00000373010 TSPO2Q5TGU0 170 aa16.3■□□□□ 0.2
USP49-202ENST00000373010 TMEM65Q6PI78 240 aa16.3■□□□□ 0.2
USP49-202ENST00000373010 LINC00696Q6ZRV3 163 aa16.3■□□□□ 0.2
USP49-202ENST00000373010 PRR13Q9NZ81 148 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms