RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 TRAPPC6BQ86SZ2 158 aa16.2■□□□□ 0.18
HOXA9-201ENST00000343483 BPIFB2Q8N4F0 458 aa16.2■□□□□ 0.18
HOXA9-201ENST00000343483 CCDC54Q8NEL0 328 aa16.2■□□□□ 0.18
HOXA9-201ENST00000343483 OR4S1Q8NGB4 309 aa16.2■□□□□ 0.18
HOXA9-201ENST00000343483 SSC4DQ8WTU2 575 aa16.2■□□□□ 0.18
HOXA9-201ENST00000343483 CCDC107Q8WV48 283 aa16.2■□□□□ 0.18
HOXA9-201ENST00000343483 PIGTQ969N2 578 aa16.2■□□□□ 0.18
HOXA9-201ENST00000343483 C1orf147Q96MC9 270 aaPredicted RBP16.2■□□□□ 0.18
HOXA9-201ENST00000343483 NICN1Q9BSH3 213 aa16.2■□□□□ 0.18
HOXA9-201ENST00000343483 ALX4Q9H161 411 aaPredicted RBP16.2■□□□□ 0.18
HOXA9-201ENST00000343483 BANF2Q9H503 90 aa16.2■□□□□ 0.18
HOXA9-201ENST00000343483 RPL36A-HNRNPH2H7BZ11 118 aa16.19■□□□□ 0.18
HOXA9-201ENST00000343483 CRTAPO75718 401 aaPredicted RBP16.19■□□□□ 0.18
HOXA9-201ENST00000343483 ZNF735P0CB33 412 aa16.19■□□□□ 0.18
HOXA9-201ENST00000343483 FCGR2AP12318 317 aa16.19■□□□□ 0.18
HOXA9-201ENST00000343483 PRF1P14222 555 aa16.19■□□□□ 0.18
HOXA9-201ENST00000343483 ZNF24P17028 368 aa16.19■□□□□ 0.18
HOXA9-201ENST00000343483 CLN3Q13286 438 aa16.19■□□□□ 0.18
HOXA9-201ENST00000343483 GRK1Q15835 563 aa16.19■□□□□ 0.18
HOXA9-201ENST00000343483 SLC22A6Q4U2R8 563 aa16.19■□□□□ 0.18
HOXA9-201ENST00000343483 OR2W3Q7Z3T1 314 aa16.19■□□□□ 0.18
HOXA9-201ENST00000343483 CPEB3Q8NE35 698 aaKnown RBP16.19■□□□□ 0.18
HOXA9-201ENST00000343483 KCNG3Q8TAE7 436 aa16.19■□□□□ 0.18
HOXA9-201ENST00000343483 C10orf35Q96D05 121 aa16.19■□□□□ 0.18
HOXA9-201ENST00000343483 A0A1W2PP11 408 aa16.18■□□□□ 0.18
HOXA9-201ENST00000343483 PLSCR5A0PG75 271 aa16.18■□□□□ 0.18
HOXA9-201ENST00000343483 SLC22A20A6NK97 555 aa16.18■□□□□ 0.18
HOXA9-201ENST00000343483 C1QTNF9BB2RNN3 333 aa16.18■□□□□ 0.18
HOXA9-201ENST00000343483 M0R233 179 aa16.18■□□□□ 0.18
HOXA9-201ENST00000343483 CDC14BO60729 498 aa16.18■□□□□ 0.18
HOXA9-201ENST00000343483 SCGNO76038 276 aa16.18■□□□□ 0.18
HOXA9-201ENST00000343483 IFNA7P01567 189 aa16.18■□□□□ 0.18
HOXA9-201ENST00000343483 C1QTNF9P0C862 333 aa16.18■□□□□ 0.18
HOXA9-201ENST00000343483 GNB3P16520 340 aa16.18■□□□□ 0.18
HOXA9-201ENST00000343483 H2BFSP57053 126 aa16.18■□□□□ 0.18
HOXA9-201ENST00000343483 SCGB2B2Q4G0G5 96 aa16.18■□□□□ 0.18
HOXA9-201ENST00000343483 TMED4Q7Z7H5 227 aa16.18■□□□□ 0.18
HOXA9-201ENST00000343483 OR10R2Q8NGX6 335 aa16.18■□□□□ 0.18
HOXA9-201ENST00000343483 ELMOD3Q96FG2 381 aa16.18■□□□□ 0.18
HOXA9-201ENST00000343483 TMEM59Q9BXS4 323 aa16.18■□□□□ 0.18
HOXA9-201ENST00000343483 SELENOIQ9C0D9 397 aa16.18■□□□□ 0.18
HOXA9-201ENST00000343483 LPAR5Q9H1C0 372 aa16.18■□□□□ 0.18
HOXA9-201ENST00000343483 C12orf49Q9H741 205 aa16.18■□□□□ 0.18
HOXA9-201ENST00000343483 GPR173Q9NS66 373 aa16.18■□□□□ 0.18
HOXA9-201ENST00000343483 ACACBO00763 2458 aa16.18■□□□□ 0.18
HOXA9-201ENST00000343483 RTTNQ86VV8 2226 aa16.18■□□□□ 0.18
HOXA9-201ENST00000343483 HLA-HP01893 362 aa16.18■□□□□ 0.18
HOXA9-201ENST00000343483 CSN2P05814 226 aa16.18■□□□□ 0.18
HOXA9-201ENST00000343483 ZNF35P13682 527 aa16.18■□□□□ 0.18
HOXA9-201ENST00000343483 PTGFRP43088 359 aa16.18■□□□□ 0.18
HOXA9-201ENST00000343483 EXOSC2Q13868 293 aaKnown RBP16.18■□□□□ 0.18
HOXA9-201ENST00000343483 MEF2DQ14814 521 aa16.18■□□□□ 0.18
HOXA9-201ENST00000343483 NUDCD2Q8WVJ2 157 aa16.18■□□□□ 0.18
HOXA9-201ENST00000343483 SLC6A7Q99884 636 aa16.18■□□□□ 0.18
HOXA9-201ENST00000343483 OPN4Q9UHM6 478 aa16.18■□□□□ 0.18
HOXA9-201ENST00000343483 MSRB2Q9Y3D2 182 aa16.18■□□□□ 0.18
HOXA9-201ENST00000343483 DNAJC13O75165 2243 aa16.18■□□□□ 0.18
HOXA9-201ENST00000343483 DISC1C4P0D8 188 aa16.17■□□□□ 0.18
HOXA9-201ENST00000343483 F5H5P2 479 aa16.17■□□□□ 0.18
HOXA9-201ENST00000343483 OR4E1P0C645 316 aa16.17■□□□□ 0.18
HOXA9-201ENST00000343483 UBBP0CG47 229 aa16.17■□□□□ 0.18
HOXA9-201ENST00000343483 C4BPBP20851 252 aa16.17■□□□□ 0.18
HOXA9-201ENST00000343483 RIPPLY1Q0D2K3 151 aa16.17■□□□□ 0.18
HOXA9-201ENST00000343483 NKPD1Q17RQ9 610 aa16.17■□□□□ 0.18
HOXA9-201ENST00000343483 THOC7Q6I9Y2 204 aaKnown RBP16.17■□□□□ 0.18
HOXA9-201ENST00000343483 RTN4RL2Q86UN3 420 aa16.17■□□□□ 0.18
HOXA9-201ENST00000343483 TMPRSS13Q9BYE2 586 aa16.17■□□□□ 0.18
HOXA9-201ENST00000343483 A0A0A6YYD4 124 aa16.17■□□□□ 0.18
HOXA9-201ENST00000343483 DHRS7CA6NNS2 312 aa16.17■□□□□ 0.18
HOXA9-201ENST00000343483 ZNF891A8MT65 544 aaPredicted RBP16.17■□□□□ 0.18
HOXA9-201ENST00000343483 L7N2F9 121 aa16.17■□□□□ 0.18
HOXA9-201ENST00000343483 CXCL2P19875 107 aa16.17■□□□□ 0.18
HOXA9-201ENST00000343483 NFYAP23511 347 aaPredicted RBP16.17■□□□□ 0.18
HOXA9-201ENST00000343483 OPCMLQ14982 345 aa16.17■□□□□ 0.18
HOXA9-201ENST00000343483 RNASE10Q5GAN6 216 aaKnown RBP16.17■□□□□ 0.18
HOXA9-201ENST00000343483 ATPAF1Q5TC12 328 aaPredicted RBP16.17■□□□□ 0.18
HOXA9-201ENST00000343483 C11orf88Q6PI97 169 aa16.17■□□□□ 0.18
HOXA9-201ENST00000343483 CRIP3Q6Q6R5 217 aa16.17■□□□□ 0.18
HOXA9-201ENST00000343483 IGFL2Q6UWQ7 119 aa16.17■□□□□ 0.18
HOXA9-201ENST00000343483 C1QL2Q7Z5L3 287 aa16.17■□□□□ 0.18
HOXA9-201ENST00000343483 CD163Q86VB7 1156 aa16.17■□□□□ 0.18
HOXA9-201ENST00000343483 GVQW1Q8N7I0 195 aa16.17■□□□□ 0.18
HOXA9-201ENST00000343483 UBQLN2Q9UHD9 624 aa16.17■□□□□ 0.18
HOXA9-201ENST00000343483 CD79AP11912 226 aa16.16■□□□□ 0.18
HOXA9-201ENST00000343483 CCNOP22674 350 aa16.16■□□□□ 0.18
HOXA9-201ENST00000343483 OR3A3P47888 321 aa16.16■□□□□ 0.18
HOXA9-201ENST00000343483 GSK3AP49840 483 aa16.16■□□□□ 0.18
HOXA9-201ENST00000343483 ZNF92Q03936 586 aa16.16■□□□□ 0.18
HOXA9-201ENST00000343483 STK11Q15831 433 aa16.16■□□□□ 0.18
HOXA9-201ENST00000343483 DCAF12L2Q5VW00 463 aa16.16■□□□□ 0.18
HOXA9-201ENST00000343483 S100A13Q99584 98 aa16.16■□□□□ 0.18
HOXA9-201ENST00000343483 NUDT16L1Q9BRJ7 211 aaKnown RBP16.16■□□□□ 0.18
HOXA9-201ENST00000343483 CST11Q9H112 138 aa16.16■□□□□ 0.18
HOXA9-201ENST00000343483 ELL3Q9HB65 397 aaPredicted RBP16.16■□□□□ 0.18
HOXA9-201ENST00000343483 IFT46Q9NQC8 304 aa16.16■□□□□ 0.18
HOXA9-201ENST00000343483 PRSS50Q9UI38 385 aa16.16■□□□□ 0.18
HOXA9-201ENST00000343483 MAP1BP46821 2468 aaKnown RBP16.16■□□□□ 0.18
HOXA9-201ENST00000343483 TRAV17A0A0B4J275 112 aa16.15■□□□□ 0.18
HOXA9-201ENST00000343483 H3BUI4 141 aa16.15■□□□□ 0.18
HOXA9-201ENST00000343483 SNAPC5O75971 98 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms