RNA–Protein interactions for RNA: ENST00000333149.6

TRIM50-201, Transcript of tripartite motif containing 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM50, Length 2,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-201ENST00000333149 SLC35A1P78382 337 aa15.75■□□□□ 0.11
TRIM50-201ENST00000333149 SPAG16Q8N0X2 631 aa15.75■□□□□ 0.11
TRIM50-201ENST00000333149 WDSUB1Q8N9V3 476 aa15.75■□□□□ 0.11
TRIM50-201ENST00000333149 CCDC54Q8NEL0 328 aa15.75■□□□□ 0.11
TRIM50-201ENST00000333149 PMS2P1A4D2B8 440 aa15.74■□□□□ 0.11
TRIM50-201ENST00000333149 RRP8O43159 456 aaKnown RBP15.74■□□□□ 0.11
TRIM50-201ENST00000333149 SNAPINO95295 136 aa15.74■□□□□ 0.11
TRIM50-201ENST00000333149 BLVRBP30043 206 aaPredicted RBP15.74■□□□□ 0.11
TRIM50-201ENST00000333149 CXCL12P48061 93 aa15.74■□□□□ 0.11
TRIM50-201ENST00000333149 HIST1H3AP68431 136 aa15.74■□□□□ 0.11
TRIM50-201ENST00000333149 H3F3AP84243 136 aa15.74■□□□□ 0.11
TRIM50-201ENST00000333149 C10orf128Q5T292 105 aa15.74■□□□□ 0.11
TRIM50-201ENST00000333149 HIST2H3PS2Q5TEC6 136 aa15.74■□□□□ 0.11
TRIM50-201ENST00000333149 EIF5AL1Q6IS14 154 aaKnown RBP15.74■□□□□ 0.11
TRIM50-201ENST00000333149 H3F3CQ6NXT2 135 aa15.74■□□□□ 0.11
TRIM50-201ENST00000333149 HAGHLQ6PII5 290 aaPredicted RBP15.74■□□□□ 0.11
TRIM50-201ENST00000333149 HIST2H3AQ71DI3 136 aa15.74■□□□□ 0.11
TRIM50-201ENST00000333149 PP6455Q8WZ26 134 aa15.74■□□□□ 0.11
TRIM50-201ENST00000333149 C10orf35Q96D05 121 aa15.74■□□□□ 0.11
TRIM50-201ENST00000333149 SPACA9Q96E40 222 aaPredicted RBP15.74■□□□□ 0.11
TRIM50-201ENST00000333149 PGAM5Q96HS1 289 aa15.74■□□□□ 0.11
TRIM50-201ENST00000333149 NECAB3Q96P71 396 aaPredicted RBP15.74■□□□□ 0.11
TRIM50-201ENST00000333149 ACKR4Q9NPB9 350 aa15.74■□□□□ 0.11
TRIM50-201ENST00000333149 DECR2Q9NUI1 292 aa15.74■□□□□ 0.11
TRIM50-201ENST00000333149 PRR13Q9NZ81 148 aa15.74■□□□□ 0.11
TRIM50-201ENST00000333149 EHFQ9NZC4 300 aa15.74■□□□□ 0.11
TRIM50-201ENST00000333149 MEMO1Q9Y316 297 aa15.74■□□□□ 0.11
TRIM50-201ENST00000333149 C5orf63A6NC05 138 aa15.73■□□□□ 0.11
TRIM50-201ENST00000333149 ZNF705EA8MWA4 302 aaPredicted RBP15.73■□□□□ 0.11
TRIM50-201ENST00000333149 SDCBPO00560 298 aaPredicted RBP15.73■□□□□ 0.11
TRIM50-201ENST00000333149 DHRS3O75911 302 aa15.73■□□□□ 0.11
TRIM50-201ENST00000333149 HPNP05981 417 aa15.73■□□□□ 0.11
TRIM50-201ENST00000333149 HEXAP06865 529 aa15.73■□□□□ 0.11
TRIM50-201ENST00000333149 CAV2P51636 162 aa15.73■□□□□ 0.11
TRIM50-201ENST00000333149 ZXDAP98168 799 aa15.73■□□□□ 0.11
TRIM50-201ENST00000333149 TMEM176BQ3YBM2 270 aaPredicted RBP15.73■□□□□ 0.11
TRIM50-201ENST00000333149 GJC3Q8NFK1 279 aa15.73■□□□□ 0.11
TRIM50-201ENST00000333149 OR51F2Q8NH61 342 aa15.73■□□□□ 0.11
TRIM50-201ENST00000333149 SPSB2Q99619 263 aa15.73■□□□□ 0.11
TRIM50-201ENST00000333149 MSR1P21757 451 aa15.73■□□□□ 0.11
TRIM50-201ENST00000333149 OTX1P32242 354 aaPredicted RBP15.73■□□□□ 0.11
TRIM50-201ENST00000333149 AFF3P51826 1226 aaKnown RBP15.73■□□□□ 0.11
TRIM50-201ENST00000333149 UBE2V2Q15819 145 aa15.73■□□□□ 0.11
TRIM50-201ENST00000333149 TMEM54Q969K7 222 aa15.73■□□□□ 0.11
TRIM50-201ENST00000333149 OR6C1Q96RD1 312 aa15.73■□□□□ 0.11
TRIM50-201ENST00000333149 CHST5Q9GZS9 411 aa15.73■□□□□ 0.11
TRIM50-201ENST00000333149 NCOA6Q14686 2063 aaPredicted RBP15.73■□□□□ 0.11
TRIM50-201ENST00000333149 STMND1H3BQB6 276 aa15.72■□□□□ 0.11
TRIM50-201ENST00000333149 BCAT2O15382 392 aaPredicted RBP15.72■□□□□ 0.11
TRIM50-201ENST00000333149 SCRG1O75711 98 aa15.72■□□□□ 0.11
TRIM50-201ENST00000333149 HTR3BO95264 441 aa15.72■□□□□ 0.11
TRIM50-201ENST00000333149 CYC1P08574 325 aa15.72■□□□□ 0.11
TRIM50-201ENST00000333149 HKR1P10072 659 aa15.72■□□□□ 0.11
TRIM50-201ENST00000333149 PNLIPP16233 465 aa15.72■□□□□ 0.11
TRIM50-201ENST00000333149 CPT2P23786 658 aa15.72■□□□□ 0.11
TRIM50-201ENST00000333149 ENDOGQ14249 297 aaKnown RBP15.72■□□□□ 0.11
TRIM50-201ENST00000333149 RSPO1Q2MKA7 263 aaPredicted RBP15.72■□□□□ 0.11
TRIM50-201ENST00000333149 GFOD2Q3B7J2 385 aa15.72■□□□□ 0.11
TRIM50-201ENST00000333149 TMEM88Q6PEY1 159 aa15.72■□□□□ 0.11
TRIM50-201ENST00000333149 RAB11FIP2Q7L804 512 aa15.72■□□□□ 0.11
TRIM50-201ENST00000333149 HAS2Q92819 552 aa15.72■□□□□ 0.11
TRIM50-201ENST00000333149 LIN37Q96GY3 246 aaPredicted RBP15.72■□□□□ 0.11
TRIM50-201ENST00000333149 RASL10BQ96S79 203 aa15.72■□□□□ 0.11
TRIM50-201ENST00000333149 CNTNAP3Q9BZ76 1288 aa15.72■□□□□ 0.11
TRIM50-201ENST00000333149 NELFAQ9H3P2 528 aa15.72■□□□□ 0.11
TRIM50-201ENST00000333149 ZNF160Q9HCG1 818 aa15.72■□□□□ 0.11
TRIM50-201ENST00000333149 RCC2Q9P258 522 aaKnown RBP15.72■□□□□ 0.11
TRIM50-201ENST00000333149 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.72■□□□□ 0.11
TRIM50-201ENST00000333149 IFNA2P01563 188 aa15.72■□□□□ 0.11
TRIM50-201ENST00000333149 KLK2P20151 261 aa15.72■□□□□ 0.11
TRIM50-201ENST00000333149 PTGER4P35408 488 aa15.72■□□□□ 0.11
TRIM50-201ENST00000333149 CLDN17P56750 224 aa15.72■□□□□ 0.11
TRIM50-201ENST00000333149 RBM39Q14498 530 aaKnown RBP15.72■□□□□ 0.11
TRIM50-201ENST00000333149 SHBQ15464 509 aa15.72■□□□□ 0.11
TRIM50-201ENST00000333149 CHRFAM7AQ494W8 412 aa15.72■□□□□ 0.11
TRIM50-201ENST00000333149 NRIP2Q9BQI9 281 aa15.72■□□□□ 0.11
TRIM50-201ENST00000333149 RHOFQ9HBH0 211 aa15.72■□□□□ 0.11
TRIM50-201ENST00000333149 TREM1Q9NP99 234 aa15.72■□□□□ 0.11
TRIM50-201ENST00000333149 C1orf123Q9NWV4 160 aa15.72■□□□□ 0.11
TRIM50-201ENST00000333149 C14orf166Q9Y224 244 aaKnown RBP15.72■□□□□ 0.11
TRIM50-201ENST00000333149 K7ESF4 209 aa15.71■□□□□ 0.11
TRIM50-201ENST00000333149 GAPDHP04406 335 aaKnown RBP15.71■□□□□ 0.11
TRIM50-201ENST00000333149 ZNF708P17019 499 aa15.71■□□□□ 0.11
TRIM50-201ENST00000333149 PRKACAP17612 351 aa15.71■□□□□ 0.11
TRIM50-201ENST00000333149 PVALBP20472 110 aaPredicted RBP15.71■□□□□ 0.11
TRIM50-201ENST00000333149 SFTPDP35247 375 aa15.71■□□□□ 0.11
TRIM50-201ENST00000333149 HOXA1P49639 335 aaPredicted RBP15.71■□□□□ 0.11
TRIM50-201ENST00000333149 SULT1A2P50226 295 aa15.71■□□□□ 0.11
TRIM50-201ENST00000333149 ADAT1Q9BUB4 502 aaKnown RBP15.71■□□□□ 0.11
TRIM50-201ENST00000333149 C19orf25Q9UFG5 118 aaPredicted RBP15.71■□□□□ 0.11
TRIM50-201ENST00000333149 TUBD1Q9UJT1 453 aa15.71■□□□□ 0.11
TRIM50-201ENST00000333149 CHCHD2Q9Y6H1 151 aaPredicted RBP15.71■□□□□ 0.11
TRIM50-201ENST00000333149 A0A087WZY1 265 aa15.7■□□□□ 0.1
TRIM50-201ENST00000333149 CST4P01036 141 aa15.7■□□□□ 0.1
TRIM50-201ENST00000333149 PDGFBP01127 241 aaPredicted RBP15.7■□□□□ 0.1
TRIM50-201ENST00000333149 CTSDP07339 412 aaPredicted RBP15.7■□□□□ 0.1
TRIM50-201ENST00000333149 GUCA1AP43080 201 aaPredicted RBP15.7■□□□□ 0.1
TRIM50-201ENST00000333149 SPEM2Q0P670 501 aa15.7■□□□□ 0.1
TRIM50-201ENST00000333149 TMEM268Q5VZI3 342 aa15.7■□□□□ 0.1
TRIM50-201ENST00000333149 CBLN2Q8IUK8 224 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms