RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 WDFY4Q6ZS81 3184 aa4.75□□□□□ -1.65
VPS50-202ENST00000305866 IGKV1-27A0A075B6S5 117 aa4.75□□□□□ -1.65
VPS50-202ENST00000305866 KANTRA0A1W2PQU2 76 aa4.75□□□□□ -1.65
VPS50-202ENST00000305866 A6NLC8 198 aa4.75□□□□□ -1.65
VPS50-202ENST00000305866 RHPN2P1A8MT19 583 aa4.75□□□□□ -1.65
VPS50-202ENST00000305866 H3BSH0 61 aa4.75□□□□□ -1.65
VPS50-202ENST00000305866 SLC34A2O95436 690 aa4.75□□□□□ -1.65
VPS50-202ENST00000305866 HPNP05981 417 aa4.75□□□□□ -1.65
VPS50-202ENST00000305866 SLC2A1P11166 492 aa4.75□□□□□ -1.65
VPS50-202ENST00000305866 GP1BBP13224 206 aa4.75□□□□□ -1.65
VPS50-202ENST00000305866 TPT1P13693 172 aaKnown RBP4.75□□□□□ -1.65
VPS50-202ENST00000305866 HIST1H1DP16402 221 aaKnown RBP4.75□□□□□ -1.65
VPS50-202ENST00000305866 EPHA1P21709 976 aa4.75□□□□□ -1.65
VPS50-202ENST00000305866 UCP1P25874 307 aa4.75□□□□□ -1.65
VPS50-202ENST00000305866 RPL4P36578 427 aaKnown RBP4.75□□□□□ -1.65
VPS50-202ENST00000305866 FHITP49789 147 aa4.75□□□□□ -1.65
VPS50-202ENST00000305866 RIDAP52758 137 aaKnown RBP4.75□□□□□ -1.65
VPS50-202ENST00000305866 ERV3-1Q14264 604 aa4.75□□□□□ -1.65
VPS50-202ENST00000305866 TMEM187Q14656 261 aa4.75□□□□□ -1.65
VPS50-202ENST00000305866 ELOBQ15370 118 aa4.75□□□□□ -1.65
VPS50-202ENST00000305866 NRN1LQ496H8 165 aa4.75□□□□□ -1.65
VPS50-202ENST00000305866 AWAT2Q6E213 333 aa4.75□□□□□ -1.65
VPS50-202ENST00000305866 POMZP3Q6PJE2 187 aa4.75□□□□□ -1.65
VPS50-202ENST00000305866 Q7L0L9 218 aa4.75□□□□□ -1.65
VPS50-202ENST00000305866 PLXDC1Q8IUK5 500 aa4.75□□□□□ -1.65
VPS50-202ENST00000305866 ZNF561Q8N587 486 aa4.75□□□□□ -1.65
VPS50-202ENST00000305866 ACBD4Q8NC06 268 aa4.75□□□□□ -1.65
VPS50-202ENST00000305866 OR6N2Q8NGY6 317 aa4.75□□□□□ -1.65
VPS50-202ENST00000305866 ABHD5Q8WTS1 349 aa4.75□□□□□ -1.65
VPS50-202ENST00000305866 KIRREL1Q96J84 757 aa4.75□□□□□ -1.65
VPS50-202ENST00000305866 CDC6Q99741 560 aa4.75□□□□□ -1.65
VPS50-202ENST00000305866 PAPOLGQ9BWT3 736 aaKnown RBP4.75□□□□□ -1.65
VPS50-202ENST00000305866 IL36GQ9NZH8 169 aa4.75□□□□□ -1.65
VPS50-202ENST00000305866 OR52A1Q9UKL2 312 aa4.75□□□□□ -1.65
VPS50-202ENST00000305866 RCL1Q9Y2P8 373 aaKnown RBP4.75□□□□□ -1.65
VPS50-202ENST00000305866 A0A1W2PPH5 198 aa4.75□□□□□ -1.65
VPS50-202ENST00000305866 C7orf77A4D0Y5 90 aa4.75□□□□□ -1.65
VPS50-202ENST00000305866 H7C2Y5 167 aa4.75□□□□□ -1.65
VPS50-202ENST00000305866 TRAF3IP2O43734 574 aaPredicted RBP4.75□□□□□ -1.65
VPS50-202ENST00000305866 PMP2P02689 132 aa4.75□□□□□ -1.65
VPS50-202ENST00000305866 MT-ND4LP03901 98 aa4.75□□□□□ -1.65
VPS50-202ENST00000305866 RLN1P04808 185 aa4.75□□□□□ -1.65
VPS50-202ENST00000305866 S100A8P05109 93 aa4.75□□□□□ -1.65
VPS50-202ENST00000305866 KLK2P20151 261 aa4.75□□□□□ -1.65
VPS50-202ENST00000305866 RAB5AP20339 215 aa4.75□□□□□ -1.65
VPS50-202ENST00000305866 OR3A4PP47883 348 aa4.75□□□□□ -1.65
VPS50-202ENST00000305866 FBXW4P57775 412 aa4.75□□□□□ -1.65
VPS50-202ENST00000305866 ERVFRD-1P60508 538 aa4.75□□□□□ -1.65
VPS50-202ENST00000305866 GMFBP60983 142 aa4.75□□□□□ -1.65
VPS50-202ENST00000305866 HNRNPKP61978 463 aaKnown RBP eCLIP4.75□□□□□ -1.65
VPS50-202ENST00000305866 AWAT1Q58HT5 328 aa4.75□□□□□ -1.65
VPS50-202ENST00000305866 TMEM42Q69YG0 159 aa4.75□□□□□ -1.65
VPS50-202ENST00000305866 LILRB2Q8N423 598 aa4.75□□□□□ -1.65
VPS50-202ENST00000305866 THAP6Q8TBB0 222 aa4.75□□□□□ -1.65
VPS50-202ENST00000305866 TNFAIP8L1Q8WVP5 186 aa4.75□□□□□ -1.65
VPS50-202ENST00000305866 MMABQ96EY8 250 aaPredicted RBP4.75□□□□□ -1.65
VPS50-202ENST00000305866 C2orf50Q96LR7 162 aa4.75□□□□□ -1.65
VPS50-202ENST00000305866 NEU1Q99519 415 aa4.75□□□□□ -1.65
VPS50-202ENST00000305866 ZNF471Q9BX82 626 aaPredicted RBP4.75□□□□□ -1.65
VPS50-202ENST00000305866 SH3BGRL3Q9H299 93 aa4.75□□□□□ -1.65
VPS50-202ENST00000305866 MIOXQ9UGB7 285 aa4.75□□□□□ -1.65
VPS50-202ENST00000305866 FOXD3Q9UJU5 478 aaPredicted RBP4.75□□□□□ -1.65
VPS50-202ENST00000305866 EMC9Q9Y3B6 208 aa4.75□□□□□ -1.65
VPS50-202ENST00000305866 YLPM1P49750 1951 aaKnown RBP4.75□□□□□ -1.65
VPS50-202ENST00000305866 RAMP1O60894 148 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 DCNP07585 359 aaKnown RBP4.74□□□□□ -1.65
VPS50-202ENST00000305866 PVALBP20472 110 aaPredicted RBP4.74□□□□□ -1.65
VPS50-202ENST00000305866 ECI1P42126 302 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 CSNK1A1P48729 337 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 GFERP55789 205 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 IL13RA1P78552 427 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 SPOCK1Q08629 439 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 TAF13Q15543 124 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 ODF4Q2M2E3 257 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 RTL6Q6ICC9 239 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 HAGHLQ6PII5 290 aaPredicted RBP4.74□□□□□ -1.65
VPS50-202ENST00000305866 ZNF429Q86V71 674 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 MAML2Q8IZL2 1156 aaPredicted RBP4.74□□□□□ -1.65
VPS50-202ENST00000305866 SLC22A24Q8N4F4 322 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 TMEM171Q8WVE6 324 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 ARL11Q969Q4 196 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 SLC25A44Q96H78 314 aaPredicted RBP4.74□□□□□ -1.65
VPS50-202ENST00000305866 PHB2Q99623 299 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 DHDHQ9UQ10 334 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 COA3Q9Y2R0 106 aaPredicted RBP4.74□□□□□ -1.65
VPS50-202ENST00000305866 ZFHX3Q15911 3703 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 A0A087WWC5 75 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 PCP4L1A6NKN8 68 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 AQP7P3A6NL99 342 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 H7C1Q1 480 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 K7ESF4 209 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 GPR37O15354 613 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 TMEM50AO95807 157 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 CST4P01036 141 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 MBPP02686 304 aaPredicted RBP4.74□□□□□ -1.65
VPS50-202ENST00000305866 SOD3P08294 240 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 FGF5P12034 268 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 GLRA1P23415 457 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 CXCR1P25024 350 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 TAS2R31P59538 309 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms