RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 MED31Q9Y3C7 131 aa11.13□□□□□ -0.63
SNX1-214ENST00000625244 A0A1W2PQ09 198 aa11.12□□□□□ -0.63
SNX1-214ENST00000625244 HTR3EA5X5Y0 456 aa11.12□□□□□ -0.63
SNX1-214ENST00000625244 A6NIZ1 184 aa11.12□□□□□ -0.63
SNX1-214ENST00000625244 CD300LBA8K4G0 201 aa11.12□□□□□ -0.63
SNX1-214ENST00000625244 H0YAE9 185 aa11.12□□□□□ -0.63
SNX1-214ENST00000625244 ALDOBP05062 364 aa11.12□□□□□ -0.63
SNX1-214ENST00000625244 H1F0P07305 194 aaKnown RBP11.12□□□□□ -0.63
SNX1-214ENST00000625244 CTLA4P16410 223 aa11.12□□□□□ -0.63
SNX1-214ENST00000625244 RAP1BP61224 184 aa11.12□□□□□ -0.63
SNX1-214ENST00000625244 RAP1AP62834 184 aa11.12□□□□□ -0.63
SNX1-214ENST00000625244 IL5RAQ01344 420 aa11.12□□□□□ -0.63
SNX1-214ENST00000625244 MS4A2Q01362 244 aa11.12□□□□□ -0.63
SNX1-214ENST00000625244 SPIBQ01892 262 aa11.12□□□□□ -0.63
SNX1-214ENST00000625244 BLMHQ13867 455 aa11.12□□□□□ -0.63
SNX1-214ENST00000625244 FGD3Q5JSP0 725 aa11.12□□□□□ -0.63
SNX1-214ENST00000625244 C1orf146Q5VVC0 180 aa11.12□□□□□ -0.63
SNX1-214ENST00000625244 PGM2L1Q6PCE3 622 aa11.12□□□□□ -0.63
SNX1-214ENST00000625244 PGAP1Q75T13 922 aa11.12□□□□□ -0.63
SNX1-214ENST00000625244 LHFPL4Q7Z7J7 247 aa11.12□□□□□ -0.63
SNX1-214ENST00000625244 NAA40Q86UY6 237 aa11.12□□□□□ -0.63
SNX1-214ENST00000625244 SBSPONQ8IVN8 264 aa11.12□□□□□ -0.63
SNX1-214ENST00000625244 C11orf53Q8IXP5 236 aa11.12□□□□□ -0.63
SNX1-214ENST00000625244 FAM86B1Q8N7N1 296 aa11.12□□□□□ -0.63
SNX1-214ENST00000625244 OR5T2Q8NGG2 359 aa11.12□□□□□ -0.63
SNX1-214ENST00000625244 OR5D13Q8NGL4 314 aa11.12□□□□□ -0.63
SNX1-214ENST00000625244 LRRC29Q8WV35 223 aa11.12□□□□□ -0.63
SNX1-214ENST00000625244 TMEM239Q8WW34 195 aa11.12□□□□□ -0.63
SNX1-214ENST00000625244 RSRC1Q96IZ7 334 aaKnown RBP11.12□□□□□ -0.63
SNX1-214ENST00000625244 COQ7Q99807 217 aa11.12□□□□□ -0.63
SNX1-214ENST00000625244 ANKRD19PQ9H560 264 aa11.12□□□□□ -0.63
SNX1-214ENST00000625244 YY1AP1Q9H869 796 aa11.12□□□□□ -0.63
SNX1-214ENST00000625244 IL1RAPQ9NPH3 570 aa11.12□□□□□ -0.63
SNX1-214ENST00000625244 NDUFAF4Q9P032 175 aa11.12□□□□□ -0.63
SNX1-214ENST00000625244 A4GNTQ9UNA3 340 aa11.12□□□□□ -0.63
SNX1-214ENST00000625244 POMPQ9Y244 141 aa11.12□□□□□ -0.63
SNX1-214ENST00000625244 NOP16Q9Y3C1 178 aaKnown RBP11.12□□□□□ -0.63
SNX1-214ENST00000625244 J3KTA2 159 aa11.11□□□□□ -0.63
SNX1-214ENST00000625244 TFF1P04155 84 aa11.11□□□□□ -0.63
SNX1-214ENST00000625244 THBS3P49746 956 aa11.11□□□□□ -0.63
SNX1-214ENST00000625244 LSM6P62312 80 aaKnown RBP11.11□□□□□ -0.63
SNX1-214ENST00000625244 KRTAP27-1Q3LI81 207 aa11.11□□□□□ -0.63
SNX1-214ENST00000625244 ZNF730Q6ZMV8 503 aa11.11□□□□□ -0.63
SNX1-214ENST00000625244 MKXQ8IYA7 352 aa11.11□□□□□ -0.63
SNX1-214ENST00000625244 OR9Q1Q8NGQ5 310 aa11.11□□□□□ -0.63
SNX1-214ENST00000625244 RAB3IPQ96QF0 476 aaPredicted RBP11.11□□□□□ -0.63
SNX1-214ENST00000625244 ZNF649Q9BS31 505 aa11.11□□□□□ -0.63
SNX1-214ENST00000625244 NMNAT1Q9HAN9 279 aaPredicted RBP11.11□□□□□ -0.63
SNX1-214ENST00000625244 VSX1Q9NZR4 365 aaPredicted RBP11.11□□□□□ -0.63
SNX1-214ENST00000625244 RHCGQ9UBD6 479 aa11.11□□□□□ -0.63
SNX1-214ENST00000625244 TEX13CA0A0J9YWL9 993 aa11.1□□□□□ -0.63
SNX1-214ENST00000625244 TCRBV5S2A0A599 114 aa11.1□□□□□ -0.63
SNX1-214ENST00000625244 DHRS12A0PJE2 317 aa11.1□□□□□ -0.63
SNX1-214ENST00000625244 GADD45GO95257 159 aa11.1□□□□□ -0.63
SNX1-214ENST00000625244 ACSM4P0C7M7 580 aa11.1□□□□□ -0.63
SNX1-214ENST00000625244 RAP2AP10114 183 aa11.1□□□□□ -0.63
SNX1-214ENST00000625244 POU1F1P28069 291 aa11.1□□□□□ -0.63
SNX1-214ENST00000625244 HIST1H3AP68431 136 aa11.1□□□□□ -0.63
SNX1-214ENST00000625244 MALLQ13021 153 aa11.1□□□□□ -0.63
SNX1-214ENST00000625244 DGUOKQ16854 277 aa11.1□□□□□ -0.63
SNX1-214ENST00000625244 ATPAF1Q5TC12 328 aaPredicted RBP11.1□□□□□ -0.63
SNX1-214ENST00000625244 HIST2H3PS2Q5TEC6 136 aa11.1□□□□□ -0.63
SNX1-214ENST00000625244 STUMQ69YW2 141 aa11.1□□□□□ -0.63
SNX1-214ENST00000625244 HIST2H3AQ71DI3 136 aa11.1□□□□□ -0.63
SNX1-214ENST00000625244 RNF113BQ8IZP6 322 aaKnown RBP11.1□□□□□ -0.63
SNX1-214ENST00000625244 OR4X2Q8NGF9 303 aa11.1□□□□□ -0.63
SNX1-214ENST00000625244 RPS4Y2Q8TD47 263 aa11.1□□□□□ -0.63
SNX1-214ENST00000625244 C7orf34Q96L11 122 aa11.1□□□□□ -0.63
SNX1-214ENST00000625244 CITED4Q96RK1 184 aa11.1□□□□□ -0.63
SNX1-214ENST00000625244 NDEL1Q9GZM8 345 aa11.1□□□□□ -0.63
SNX1-214ENST00000625244 HDHD2Q9H0R4 259 aa11.1□□□□□ -0.63
SNX1-214ENST00000625244 ELL3Q9HB65 397 aaPredicted RBP11.1□□□□□ -0.63
SNX1-214ENST00000625244 SLC25A10Q9UBX3 287 aaPredicted RBP11.1□□□□□ -0.63
SNX1-214ENST00000625244 TMEM5Q9Y2B1 443 aa11.1□□□□□ -0.63
SNX1-214ENST00000625244 COA3Q9Y2R0 106 aaPredicted RBP11.1□□□□□ -0.63
SNX1-214ENST00000625244 KMT2AQ03164 3969 aa11.1□□□□□ -0.63
SNX1-214ENST00000625244 ABCA13Q86UQ4 5058 aa11.09□□□□□ -0.63
SNX1-214ENST00000625244 A0A1W2PRQ8 180 aa11.09□□□□□ -0.63
SNX1-214ENST00000625244 FAM90A8PA6NJQ4 464 aa11.09□□□□□ -0.63
SNX1-214ENST00000625244 F5H5K5 113 aa11.09□□□□□ -0.63
SNX1-214ENST00000625244 GNGT2O14610 69 aa11.09□□□□□ -0.63
SNX1-214ENST00000625244 KRT36O76013 467 aa11.09□□□□□ -0.63
SNX1-214ENST00000625244 DIRAS1O95057 198 aa11.09□□□□□ -0.63
SNX1-214ENST00000625244 LCATP04180 440 aa11.09□□□□□ -0.63
SNX1-214ENST00000625244 SEMG1P04279 462 aa11.09□□□□□ -0.63
SNX1-214ENST00000625244 NDUFB7P17568 137 aa11.09□□□□□ -0.63
SNX1-214ENST00000625244 RRM2P31350 389 aa11.09□□□□□ -0.63
SNX1-214ENST00000625244 IFNGR2P38484 337 aa11.09□□□□□ -0.63
SNX1-214ENST00000625244 LGALS4P56470 323 aa11.09□□□□□ -0.63
SNX1-214ENST00000625244 FHL1Q13642 323 aa11.09□□□□□ -0.63
SNX1-214ENST00000625244 DGCR6Q14129 220 aa11.09□□□□□ -0.63
SNX1-214ENST00000625244 CORO6Q6QEF8 472 aa11.09□□□□□ -0.63
SNX1-214ENST00000625244 ASRGL1Q7L266 308 aa11.09□□□□□ -0.63
SNX1-214ENST00000625244 MRPL21Q7Z2W9 205 aaKnown RBP11.09□□□□□ -0.63
SNX1-214ENST00000625244 WDR86Q86TI4 376 aa11.09□□□□□ -0.63
SNX1-214ENST00000625244 C12orf43Q96C57 262 aaKnown RBP11.09□□□□□ -0.63
SNX1-214ENST00000625244 LYZL4Q96KX0 146 aa11.09□□□□□ -0.63
SNX1-214ENST00000625244 GAFA1Q96PS6 74 aa11.09□□□□□ -0.63
SNX1-214ENST00000625244 RERGLQ9H628 205 aa11.09□□□□□ -0.63
SNX1-214ENST00000625244 RNPEPL1Q9HAU8 725 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms