RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 ZDHHC23Q8IYP9 409 aa18.83■□□□□ 0.6
CCDC9-204ENST00000599398 PPP1R14AQ96A00 147 aa18.83■□□□□ 0.6
CCDC9-204ENST00000599398 RNF170Q96K19 258 aa18.83■□□□□ 0.6
CCDC9-204ENST00000599398 HIST1H2AAQ96QV6 131 aa18.83■□□□□ 0.6
CCDC9-204ENST00000599398 SUCNR1Q9BXA5 334 aa18.83■□□□□ 0.6
CCDC9-204ENST00000599398 GPR84Q9NQS5 396 aa18.83■□□□□ 0.6
CCDC9-204ENST00000599398 CTSZQ9UBR2 303 aa18.83■□□□□ 0.6
CCDC9-204ENST00000599398 ZNF816-ZNF321PA0A0X1KG74 233 aa18.82■□□□□ 0.6
CCDC9-204ENST00000599398 CDIPTO14735 213 aa18.82■□□□□ 0.6
CCDC9-204ENST00000599398 APOL3O95236 402 aa18.82■□□□□ 0.6
CCDC9-204ENST00000599398 ALPLP05186 524 aa18.82■□□□□ 0.6
CCDC9-204ENST00000599398 FPR2P25090 351 aa18.82■□□□□ 0.6
CCDC9-204ENST00000599398 HTR1FP30939 366 aa18.82■□□□□ 0.6
CCDC9-204ENST00000599398 ATP6V1E1P36543 226 aa18.82■□□□□ 0.6
CCDC9-204ENST00000599398 NPY4RP50391 375 aa18.82■□□□□ 0.6
CCDC9-204ENST00000599398 ZNF841Q6ZN19 808 aa18.82■□□□□ 0.6
CCDC9-204ENST00000599398 PLEKHG7Q6ZR37 379 aa18.82■□□□□ 0.6
CCDC9-204ENST00000599398 THAP5Q7Z6K1 395 aa18.82■□□□□ 0.6
CCDC9-204ENST00000599398 FAM90A1Q86YD7 464 aa18.82■□□□□ 0.6
CCDC9-204ENST00000599398 SEMA6DQ8NFY4 1073 aa18.82■□□□□ 0.6
CCDC9-204ENST00000599398 OR5P3Q8WZ94 311 aa18.82■□□□□ 0.6
CCDC9-204ENST00000599398 NUDT16L1Q9BRJ7 211 aaKnown RBP18.82■□□□□ 0.6
CCDC9-204ENST00000599398 IMPAD1Q9NX62 359 aa18.82■□□□□ 0.6
CCDC9-204ENST00000599398 NUFIP1Q9UHK0 495 aaKnown RBP18.82■□□□□ 0.6
CCDC9-204ENST00000599398 TMEM210A6NLX4 147 aa18.81■□□□□ 0.6
CCDC9-204ENST00000599398 GMFBP60983 142 aa18.81■□□□□ 0.6
CCDC9-204ENST00000599398 EGR3Q06889 387 aa18.81■□□□□ 0.6
CCDC9-204ENST00000599398 MICBQ29980 383 aa18.81■□□□□ 0.6
CCDC9-204ENST00000599398 ZIK1Q3SY52 487 aaPredicted RBP18.81■□□□□ 0.6
CCDC9-204ENST00000599398 BCL2L15Q5TBC7 163 aa18.81■□□□□ 0.6
CCDC9-204ENST00000599398 TEX36Q5VZQ5 186 aa18.81■□□□□ 0.6
CCDC9-204ENST00000599398 RPL3LQ92901 407 aaKnown RBP18.81■□□□□ 0.6
CCDC9-204ENST00000599398 MOB1AQ9H8S9 216 aa18.81■□□□□ 0.6
CCDC9-204ENST00000599398 NUP50Q9UKX7 468 aa18.81■□□□□ 0.6
CCDC9-204ENST00000599398 R4GMQ9 66 aa18.81■□□□□ 0.6
CCDC9-204ENST00000599398 KIR2DS1A0A191URI9 304 aa18.8■□□□□ 0.6
CCDC9-204ENST00000599398 ALDH3A2P51648 485 aa18.8■□□□□ 0.6
CCDC9-204ENST00000599398 GPM6AP51674 278 aa18.8■□□□□ 0.6
CCDC9-204ENST00000599398 HILS1P60008 231 aa18.8■□□□□ 0.6
CCDC9-204ENST00000599398 RIPPLY1Q0D2K3 151 aa18.8■□□□□ 0.6
CCDC9-204ENST00000599398 CEP78Q5JTW2 689 aa18.8■□□□□ 0.6
CCDC9-204ENST00000599398 USP43Q70EL4 1123 aa18.8■□□□□ 0.6
CCDC9-204ENST00000599398 SSX6Q7RTT6 188 aa18.8■□□□□ 0.6
CCDC9-204ENST00000599398 YIPF7Q8N8F6 280 aa18.8■□□□□ 0.6
CCDC9-204ENST00000599398 OR10H4Q8NGA5 316 aa18.8■□□□□ 0.6
CCDC9-204ENST00000599398 HPSE2Q8WWQ2 592 aa18.8■□□□□ 0.6
CCDC9-204ENST00000599398 RFKQ969G6 155 aa18.8■□□□□ 0.6
CCDC9-204ENST00000599398 EME1Q96AY2 570 aa18.8■□□□□ 0.6
CCDC9-204ENST00000599398 RAB3IPQ96QF0 476 aaPredicted RBP18.8■□□□□ 0.6
CCDC9-204ENST00000599398 JMJD8Q96S16 334 aa18.8■□□□□ 0.6
CCDC9-204ENST00000599398 TLNRD1Q9H1K6 362 aa18.8■□□□□ 0.6
CCDC9-204ENST00000599398 RASSF4Q9H2L5 321 aa18.8■□□□□ 0.6
CCDC9-204ENST00000599398 USE1Q9NZ43 259 aa18.8■□□□□ 0.6
CCDC9-204ENST00000599398 MRM2Q9UI43 246 aaKnown RBP18.8■□□□□ 0.6
CCDC9-204ENST00000599398 PIGLQ9Y2B2 252 aa18.8■□□□□ 0.6
CCDC9-204ENST00000599398 C22orf46C9J442 243 aa18.79■□□□□ 0.6
CCDC9-204ENST00000599398 TNFRSF13BO14836 293 aaPredicted RBP18.79■□□□□ 0.6
CCDC9-204ENST00000599398 TMPRSS2O15393 492 aa18.79■□□□□ 0.6
CCDC9-204ENST00000599398 ENSAO43768 121 aaKnown RBP18.79■□□□□ 0.6
CCDC9-204ENST00000599398 SRSF10O75494 262 aaKnown RBP18.79■□□□□ 0.6
CCDC9-204ENST00000599398 MTRF1O75570 445 aaKnown RBP18.79■□□□□ 0.6
CCDC9-204ENST00000599398 RPP14O95059 124 aaKnown RBP18.79■□□□□ 0.6
CCDC9-204ENST00000599398 TTRP02766 147 aa18.79■□□□□ 0.6
CCDC9-204ENST00000599398 KRT8P05787 483 aa18.79■□□□□ 0.6
CCDC9-204ENST00000599398 ATP6V1B1P15313 513 aa18.79■□□□□ 0.6
CCDC9-204ENST00000599398 MUC1P15941 1255 aaPredicted RBP18.79■□□□□ 0.6
CCDC9-204ENST00000599398 KLF17Q5JT82 389 aaPredicted RBP18.79■□□□□ 0.6
CCDC9-204ENST00000599398 CD276Q5ZPR3 534 aa18.79■□□□□ 0.6
CCDC9-204ENST00000599398 CBR4Q8N4T8 237 aa18.79■□□□□ 0.6
CCDC9-204ENST00000599398 SCCPDHQ8NBX0 429 aa18.79■□□□□ 0.6
CCDC9-204ENST00000599398 DACT3Q96B18 629 aaPredicted RBP18.79■□□□□ 0.6
CCDC9-204ENST00000599398 FGF23Q9GZV9 251 aaPredicted RBP18.79■□□□□ 0.6
CCDC9-204ENST00000599398 SMURF1Q9HCE7 757 aa18.79■□□□□ 0.6
CCDC9-204ENST00000599398 OR52A1Q9UKL2 312 aa18.79■□□□□ 0.6
CCDC9-204ENST00000599398 SNX5Q9Y5X3 404 aa18.79■□□□□ 0.6
CCDC9-204ENST00000599398 IGHV3OR16-10A0A075B7F0 116 aa18.78■□□□□ 0.6
CCDC9-204ENST00000599398 A0A1W2PQL4 384 aaPredicted RBP18.78■□□□□ 0.6
CCDC9-204ENST00000599398 IGLV3-1P01715 115 aa18.78■□□□□ 0.6
CCDC9-204ENST00000599398 OR2T7P0C7T2 308 aa18.78■□□□□ 0.6
CCDC9-204ENST00000599398 FAHP16930 419 aa18.78■□□□□ 0.6
CCDC9-204ENST00000599398 DMRTC1Q5HYR2 192 aa18.78■□□□□ 0.6
CCDC9-204ENST00000599398 MOB3CQ70IA8 216 aa18.78■□□□□ 0.6
CCDC9-204ENST00000599398 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP18.78■□□□□ 0.6
CCDC9-204ENST00000599398 OR2T27Q8NH04 317 aa18.78■□□□□ 0.6
CCDC9-204ENST00000599398 UBE2FQ969M7 185 aa18.78■□□□□ 0.6
CCDC9-204ENST00000599398 ITFG2Q969R8 447 aa18.78■□□□□ 0.6
CCDC9-204ENST00000599398 SEH1LQ96EE3 360 aa18.78■□□□□ 0.6
CCDC9-204ENST00000599398 S100A14Q9HCY8 104 aa18.78■□□□□ 0.6
CCDC9-204ENST00000599398 DNAJB11Q9UBS4 358 aa18.78■□□□□ 0.6
CCDC9-204ENST00000599398 ZNF69Q9UC07 566 aa18.78■□□□□ 0.6
CCDC9-204ENST00000599398 ENPP5Q9UJA9 477 aa18.78■□□□□ 0.6
CCDC9-204ENST00000599398 SRRM5B3KS81 715 aa18.77■□□□□ 0.6
CCDC9-204ENST00000599398 ZNF732B4DXR9 585 aa18.77■□□□□ 0.6
CCDC9-204ENST00000599398 DHRS3O75911 302 aa18.77■□□□□ 0.6
CCDC9-204ENST00000599398 PPIAL4GP0DN37 164 aa18.77■□□□□ 0.6
CCDC9-204ENST00000599398 CFHR2P36980 270 aa18.77■□□□□ 0.6
CCDC9-204ENST00000599398 GNG3P63215 75 aa18.77■□□□□ 0.6
CCDC9-204ENST00000599398 TMED1Q13445 227 aa18.77■□□□□ 0.6
CCDC9-204ENST00000599398 CEACAM21Q3KPI0 293 aa18.77■□□□□ 0.6
CCDC9-204ENST00000599398 PLCXD3Q63HM9 321 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms