RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 SOX21Q9Y651 276 aaPredicted RBP10.56□□□□□ -0.72
NPLOC4-213ENST00000573519 ANK2Q01484 3957 aa10.56□□□□□ -0.72
NPLOC4-213ENST00000573519 TMEM269A0A1B0GVZ9 245 aa10.55□□□□□ -0.72
NPLOC4-213ENST00000573519 TMEM89A2RUT3 159 aa10.55□□□□□ -0.72
NPLOC4-213ENST00000573519 EI24O14681 340 aa10.55□□□□□ -0.72
NPLOC4-213ENST00000573519 LHBP01229 141 aa10.55□□□□□ -0.72
NPLOC4-213ENST00000573519 ACKR3P25106 362 aa10.55□□□□□ -0.72
NPLOC4-213ENST00000573519 MTNR1AP48039 350 aa10.55□□□□□ -0.72
NPLOC4-213ENST00000573519 MICBQ29980 383 aa10.55□□□□□ -0.72
NPLOC4-213ENST00000573519 ZIK1Q3SY52 487 aaPredicted RBP10.55□□□□□ -0.72
NPLOC4-213ENST00000573519 GPR157Q5UAW9 335 aa10.55□□□□□ -0.72
NPLOC4-213ENST00000573519 TEX36Q5VZQ5 186 aa10.55□□□□□ -0.72
NPLOC4-213ENST00000573519 WDR82Q6UXN9 313 aa10.55□□□□□ -0.72
NPLOC4-213ENST00000573519 DOK3Q7L591 496 aa10.55□□□□□ -0.72
NPLOC4-213ENST00000573519 GALNT4Q8N4A0 578 aa10.55□□□□□ -0.72
NPLOC4-213ENST00000573519 ITPKCQ96DU7 683 aa10.55□□□□□ -0.72
NPLOC4-213ENST00000573519 RNF170Q96K19 258 aa10.55□□□□□ -0.72
NPLOC4-213ENST00000573519 HIST1H2AAQ96QV6 131 aa10.55□□□□□ -0.72
NPLOC4-213ENST00000573519 CNN2Q99439 309 aaKnown RBP10.55□□□□□ -0.72
NPLOC4-213ENST00000573519 CCL13Q99616 98 aa10.55□□□□□ -0.72
NPLOC4-213ENST00000573519 GABARAPL3Q9BY60 117 aa10.55□□□□□ -0.72
NPLOC4-213ENST00000573519 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.55□□□□□ -0.72
NPLOC4-213ENST00000573519 ENOPH1Q9UHY7 261 aa10.55□□□□□ -0.72
NPLOC4-213ENST00000573519 MPC1Q9Y5U8 109 aa10.55□□□□□ -0.72
NPLOC4-213ENST00000573519 MDFIC2A0A1B0GVS7 189 aa10.54□□□□□ -0.72
NPLOC4-213ENST00000573519 ZNF879B4DU55 563 aa10.54□□□□□ -0.72
NPLOC4-213ENST00000573519 DVL1O14640 695 aa10.54□□□□□ -0.72
NPLOC4-213ENST00000573519 MAGEB4O15481 346 aaPredicted RBP10.54□□□□□ -0.72
NPLOC4-213ENST00000573519 TOX4O94842 621 aa10.54□□□□□ -0.72
NPLOC4-213ENST00000573519 APOL3O95236 402 aa10.54□□□□□ -0.72
NPLOC4-213ENST00000573519 PLATP00750 562 aa10.54□□□□□ -0.72
NPLOC4-213ENST00000573519 SFTPBP07988 381 aa10.54□□□□□ -0.72
NPLOC4-213ENST00000573519 MUC1P15941 1255 aaPredicted RBP10.54□□□□□ -0.72
NPLOC4-213ENST00000573519 PRTN3P24158 256 aa10.54□□□□□ -0.72
NPLOC4-213ENST00000573519 ELF3P78545 371 aaPredicted RBP10.54□□□□□ -0.72
NPLOC4-213ENST00000573519 WDR38Q5JTN6 314 aa10.54□□□□□ -0.72
NPLOC4-213ENST00000573519 NXNL2Q5VZ03 156 aa10.54□□□□□ -0.72
NPLOC4-213ENST00000573519 BTN2A1Q7KYR7 527 aa10.54□□□□□ -0.72
NPLOC4-213ENST00000573519 THAP5Q7Z6K1 395 aa10.54□□□□□ -0.72
NPLOC4-213ENST00000573519 ZDHHC23Q8IYP9 409 aa10.54□□□□□ -0.72
NPLOC4-213ENST00000573519 CBR4Q8N4T8 237 aa10.54□□□□□ -0.72
NPLOC4-213ENST00000573519 PNLDC1Q8NA58 520 aaKnown RBP10.54□□□□□ -0.72
NPLOC4-213ENST00000573519 ASB17Q8WXJ9 295 aa10.54□□□□□ -0.72
NPLOC4-213ENST00000573519 OR5P3Q8WZ94 311 aa10.54□□□□□ -0.72
NPLOC4-213ENST00000573519 RPL3LQ92901 407 aaKnown RBP10.54□□□□□ -0.72
NPLOC4-213ENST00000573519 UBE2FQ969M7 185 aa10.54□□□□□ -0.72
NPLOC4-213ENST00000573519 ZDHHC16Q969W1 377 aa10.54□□□□□ -0.72
NPLOC4-213ENST00000573519 SEH1LQ96EE3 360 aa10.54□□□□□ -0.72
NPLOC4-213ENST00000573519 FAM71F1Q96KD3 344 aaPredicted RBP10.54□□□□□ -0.72
NPLOC4-213ENST00000573519 PBOV1Q9GZY1 135 aa10.54□□□□□ -0.72
NPLOC4-213ENST00000573519 S100A14Q9HCY8 104 aa10.54□□□□□ -0.72
NPLOC4-213ENST00000573519 ABCB9Q9NP78 766 aa10.54□□□□□ -0.72
NPLOC4-213ENST00000573519 FAM206AQ9NX38 181 aa10.54□□□□□ -0.72
NPLOC4-213ENST00000573519 DNAJB11Q9UBS4 358 aa10.54□□□□□ -0.72
NPLOC4-213ENST00000573519 ZNF391Q9UJN7 358 aa10.54□□□□□ -0.72
NPLOC4-213ENST00000573519 TMEM14AQ9Y6G1 99 aa10.54□□□□□ -0.72
NPLOC4-213ENST00000573519 A0A1B0GW55 424 aa10.53□□□□□ -0.72
NPLOC4-213ENST00000573519 SLC22A31A6NKX4 558 aa10.53□□□□□ -0.72
NPLOC4-213ENST00000573519 TMEM210A6NLX4 147 aa10.53□□□□□ -0.72
NPLOC4-213ENST00000573519 TNFRSF13BO14836 293 aaPredicted RBP10.53□□□□□ -0.72
NPLOC4-213ENST00000573519 CST4P01036 141 aa10.53□□□□□ -0.72
NPLOC4-213ENST00000573519 ALPLP05186 524 aa10.53□□□□□ -0.72
NPLOC4-213ENST00000573519 LIPFP07098 398 aa10.53□□□□□ -0.72
NPLOC4-213ENST00000573519 DUX4L2P0CJ85 424 aa10.53□□□□□ -0.72
NPLOC4-213ENST00000573519 DUX4L3P0CJ86 424 aa10.53□□□□□ -0.72
NPLOC4-213ENST00000573519 DUX4L4P0CJ87 422 aa10.53□□□□□ -0.72
NPLOC4-213ENST00000573519 DUX4L5P0CJ88 424 aa10.53□□□□□ -0.72
NPLOC4-213ENST00000573519 DUX4L6P0CJ89 424 aa10.53□□□□□ -0.72
NPLOC4-213ENST00000573519 DUX4L7P0CJ90 424 aa10.53□□□□□ -0.72
NPLOC4-213ENST00000573519 CFHR2P36980 270 aa10.53□□□□□ -0.72
NPLOC4-213ENST00000573519 MAP2K3P46734 347 aa10.53□□□□□ -0.72
NPLOC4-213ENST00000573519 COMPP49747 757 aaPredicted RBP10.53□□□□□ -0.72
NPLOC4-213ENST00000573519 RIDAP52758 137 aaKnown RBP10.53□□□□□ -0.72
NPLOC4-213ENST00000573519 CXCR4P61073 352 aa10.53□□□□□ -0.72
NPLOC4-213ENST00000573519 IKZF1Q13422 519 aa10.53□□□□□ -0.72
NPLOC4-213ENST00000573519 ZNF829Q3KNS6 432 aaPredicted RBP10.53□□□□□ -0.72
NPLOC4-213ENST00000573519 CEP78Q5JTW2 689 aa10.53□□□□□ -0.72
NPLOC4-213ENST00000573519 METTL11BQ5VVY1 283 aa10.53□□□□□ -0.72
NPLOC4-213ENST00000573519 RUSC1-AS1Q66K80 236 aa10.53□□□□□ -0.72
NPLOC4-213ENST00000573519 DEGS2Q6QHC5 323 aa10.53□□□□□ -0.72
NPLOC4-213ENST00000573519 DUX4L9Q6RFH8 374 aaPredicted RBP10.53□□□□□ -0.72
NPLOC4-213ENST00000573519 SLC36A1Q7Z2H8 476 aa10.53□□□□□ -0.72
NPLOC4-213ENST00000573519 SLC35F2Q8IXU6 374 aa10.53□□□□□ -0.72
NPLOC4-213ENST00000573519 ZNF679Q8IYX0 411 aa10.53□□□□□ -0.72
NPLOC4-213ENST00000573519 FGFRL1Q8N441 504 aa10.53□□□□□ -0.72
NPLOC4-213ENST00000573519 FAM216BQ8N7L0 139 aa10.53□□□□□ -0.72
NPLOC4-213ENST00000573519 SCCPDHQ8NBX0 429 aa10.53□□□□□ -0.72
NPLOC4-213ENST00000573519 OR5T2Q8NGG2 359 aa10.53□□□□□ -0.72
NPLOC4-213ENST00000573519 OR51G2Q8NGK0 314 aa10.53□□□□□ -0.72
NPLOC4-213ENST00000573519 OR51E1Q8TCB6 317 aa10.53□□□□□ -0.72
NPLOC4-213ENST00000573519 PPP1R14AQ96A00 147 aa10.53□□□□□ -0.72
NPLOC4-213ENST00000573519 SLC25A28Q96A46 364 aa10.53□□□□□ -0.72
NPLOC4-213ENST00000573519 C1orf147Q96MC9 270 aaPredicted RBP10.53□□□□□ -0.72
NPLOC4-213ENST00000573519 RAB3IPQ96QF0 476 aaPredicted RBP10.53□□□□□ -0.72
NPLOC4-213ENST00000573519 OR8B4Q96RC9 309 aa10.53□□□□□ -0.72
NPLOC4-213ENST00000573519 TBX5Q99593 518 aa10.53□□□□□ -0.72
NPLOC4-213ENST00000573519 APOL4Q9BPW4 351 aa10.53□□□□□ -0.72
NPLOC4-213ENST00000573519 TLNRD1Q9H1K6 362 aa10.53□□□□□ -0.72
NPLOC4-213ENST00000573519 ZMAT3Q9HA38 289 aaKnown RBP10.53□□□□□ -0.72
NPLOC4-213ENST00000573519 ADGRL4Q9HBW9 690 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms