RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 CREBL2O60519 120 aaPredicted RBP16.63■□□□□ 0.25
SMPD3-203ENST00000563226 SCGNO76038 276 aa16.63■□□□□ 0.25
SMPD3-203ENST00000563226 ALX3O95076 343 aa16.63■□□□□ 0.25
SMPD3-203ENST00000563226 ACTL6AO96019 429 aa16.63■□□□□ 0.25
SMPD3-203ENST00000563226 GSK3AP49840 483 aa16.63■□□□□ 0.25
SMPD3-203ENST00000563226 NKPD1Q17RQ9 610 aa16.63■□□□□ 0.25
SMPD3-203ENST00000563226 NLRC3Q7RTR2 1065 aa16.63■□□□□ 0.25
SMPD3-203ENST00000563226 C9orf62Q8N4C0 152 aa16.63■□□□□ 0.25
SMPD3-203ENST00000563226 C10orf35Q96D05 121 aa16.63■□□□□ 0.25
SMPD3-203ENST00000563226 WDYHV1Q96HA8 205 aa16.63■□□□□ 0.25
SMPD3-203ENST00000563226 HYLS1Q96M11 299 aa16.63■□□□□ 0.25
SMPD3-203ENST00000563226 NUDT16L1Q9BRJ7 211 aaKnown RBP16.63■□□□□ 0.25
SMPD3-203ENST00000563226 URB1O60287 2271 aaKnown RBP16.63■□□□□ 0.25
SMPD3-203ENST00000563226 ZNF587BE7ETH6 402 aa16.63■□□□□ 0.25
SMPD3-203ENST00000563226 G3V3Q6 166 aa16.63■□□□□ 0.25
SMPD3-203ENST00000563226 RPL36A-HNRNPH2H7BZ11 118 aa16.63■□□□□ 0.25
SMPD3-203ENST00000563226 RAD51DO75771 328 aa16.63■□□□□ 0.25
SMPD3-203ENST00000563226 CHRM2P08172 466 aa16.63■□□□□ 0.25
SMPD3-203ENST00000563226 EDN3P14138 238 aa16.63■□□□□ 0.25
SMPD3-203ENST00000563226 ZNF92Q03936 586 aa16.63■□□□□ 0.25
SMPD3-203ENST00000563226 NRN1LQ496H8 165 aa16.63■□□□□ 0.25
SMPD3-203ENST00000563226 SLC7A5P1Q8MH63 180 aa16.63■□□□□ 0.25
SMPD3-203ENST00000563226 BPIFB2Q8N4F0 458 aa16.63■□□□□ 0.25
SMPD3-203ENST00000563226 CCDC54Q8NEL0 328 aa16.63■□□□□ 0.25
SMPD3-203ENST00000563226 MGAT4CQ9UBM8 478 aa16.63■□□□□ 0.25
SMPD3-203ENST00000563226 ZNF107Q9UII5 783 aaPredicted RBP16.63■□□□□ 0.25
SMPD3-203ENST00000563226 HSPB11Q9Y547 144 aa16.63■□□□□ 0.25
SMPD3-203ENST00000563226 TRGV5A0A0B4J1U4 118 aa16.62■□□□□ 0.25
SMPD3-203ENST00000563226 HLA-HP01893 362 aa16.62■□□□□ 0.25
SMPD3-203ENST00000563226 UBBP0CG47 229 aa16.62■□□□□ 0.25
SMPD3-203ENST00000563226 HIST1H1DP16402 221 aaKnown RBP16.62■□□□□ 0.25
SMPD3-203ENST00000563226 SERPINA2P20848 420 aa16.62■□□□□ 0.25
SMPD3-203ENST00000563226 ALDH3B1P43353 468 aa16.62■□□□□ 0.25
SMPD3-203ENST00000563226 UBE2MP61081 183 aaKnown RBP16.62■□□□□ 0.25
SMPD3-203ENST00000563226 RIPPLY1Q0D2K3 151 aa16.62■□□□□ 0.25
SMPD3-203ENST00000563226 CD163Q86VB7 1156 aa16.62■□□□□ 0.25
SMPD3-203ENST00000563226 TMEM178AQ8NBL3 297 aa16.62■□□□□ 0.25
SMPD3-203ENST00000563226 OR13C8Q8NGS7 320 aa16.62■□□□□ 0.25
SMPD3-203ENST00000563226 GRPEL2Q8TAA5 225 aa16.62■□□□□ 0.25
SMPD3-203ENST00000563226 APH1AQ96BI3 265 aa16.62■□□□□ 0.25
SMPD3-203ENST00000563226 RAB3CQ96E17 227 aa16.62■□□□□ 0.25
SMPD3-203ENST00000563226 ARHGAP5-AS1Q96IT6 56 aa16.62■□□□□ 0.25
SMPD3-203ENST00000563226 ZDHHC11Q9H8X9 412 aa16.62■□□□□ 0.25
SMPD3-203ENST00000563226 RNF122Q9H9V4 155 aa16.62■□□□□ 0.25
SMPD3-203ENST00000563226 GPN1Q9HCN4 374 aaPredicted RBP16.62■□□□□ 0.25
SMPD3-203ENST00000563226 MGAT4AQ9UM21 535 aa16.62■□□□□ 0.25
SMPD3-203ENST00000563226 DOCK7Q96N67 2140 aa16.62■□□□□ 0.25
SMPD3-203ENST00000563226 SNRPGP15A8MWD9 76 aa16.61■□□□□ 0.25
SMPD3-203ENST00000563226 CPN1P15169 458 aa16.61■□□□□ 0.25
SMPD3-203ENST00000563226 RPS27AP62979 156 aaKnown RBP16.61■□□□□ 0.25
SMPD3-203ENST00000563226 SCGB2B2Q4G0G5 96 aa16.61■□□□□ 0.25
SMPD3-203ENST00000563226 WDR89Q96FK6 387 aaPredicted RBP16.61■□□□□ 0.25
SMPD3-203ENST00000563226 CHIAQ9BZP6 476 aa16.61■□□□□ 0.25
SMPD3-203ENST00000563226 TNRC6AQ8NDV7 1962 aaKnown RBP16.61■□□□□ 0.25
SMPD3-203ENST00000563226 FAM186AA6NE01 2351 aa16.61■□□□□ 0.25
SMPD3-203ENST00000563226 IGKV1-27A0A075B6S5 117 aa16.61■□□□□ 0.25
SMPD3-203ENST00000563226 LOC100509620A0A075B734 347 aa16.61■□□□□ 0.25
SMPD3-203ENST00000563226 hCG_38984A0A1B0GV85 526 aa16.61■□□□□ 0.25
SMPD3-203ENST00000563226 OR14I1A6ND48 311 aa16.61■□□□□ 0.25
SMPD3-203ENST00000563226 DHRS7CA6NNS2 312 aa16.61■□□□□ 0.25
SMPD3-203ENST00000563226 CDK2AP1O14519 115 aa16.61■□□□□ 0.25
SMPD3-203ENST00000563226 MGMTP16455 207 aa16.61■□□□□ 0.25
SMPD3-203ENST00000563226 FAM3AP98173 230 aa16.61■□□□□ 0.25
SMPD3-203ENST00000563226 RNPS1Q15287 305 aaKnown RBP16.61■□□□□ 0.25
SMPD3-203ENST00000563226 OR51T1Q8NGJ9 327 aa16.61■□□□□ 0.25
SMPD3-203ENST00000563226 CST11Q9H112 138 aa16.61■□□□□ 0.25
SMPD3-203ENST00000563226 POFUT1Q9H488 388 aa16.61■□□□□ 0.25
SMPD3-203ENST00000563226 UPB1Q9UBR1 384 aa16.61■□□□□ 0.25
SMPD3-203ENST00000563226 PRSS50Q9UI38 385 aa16.61■□□□□ 0.25
SMPD3-203ENST00000563226 FRYQ5TBA9 3013 aa16.61■□□□□ 0.25
SMPD3-203ENST00000563226 MFNGO00587 321 aa16.6■□□□□ 0.25
SMPD3-203ENST00000563226 GNG2P59768 71 aa16.6■□□□□ 0.25
SMPD3-203ENST00000563226 C2orf68Q2NKX9 166 aa16.6■□□□□ 0.25
SMPD3-203ENST00000563226 MCEMP1Q8IX19 187 aa16.6■□□□□ 0.25
SMPD3-203ENST00000563226 MUC20Q8N307 709 aaPredicted RBP16.6■□□□□ 0.25
SMPD3-203ENST00000563226 ZNF431Q8TF32 576 aaPredicted RBP16.6■□□□□ 0.25
SMPD3-203ENST00000563226 SNAPC3Q92966 411 aa16.6■□□□□ 0.25
SMPD3-203ENST00000563226 SLA2Q9H6Q3 261 aa16.6■□□□□ 0.25
SMPD3-203ENST00000563226 RANBP3Q9H6Z4 567 aaPredicted RBP16.6■□□□□ 0.25
SMPD3-203ENST00000563226 C12orf49Q9H741 205 aa16.6■□□□□ 0.25
SMPD3-203ENST00000563226 ELL3Q9HB65 397 aaPredicted RBP16.6■□□□□ 0.25
SMPD3-203ENST00000563226 IFT46Q9NQC8 304 aa16.6■□□□□ 0.25
SMPD3-203ENST00000563226 PIPOXQ9P0Z9 390 aa16.6■□□□□ 0.25
SMPD3-203ENST00000563226 MED12LQ86YW9 2145 aa16.6■□□□□ 0.25
SMPD3-203ENST00000563226 FAM230AA0A1W2PPH8 454 aa16.6■□□□□ 0.25
SMPD3-203ENST00000563226 FOXI3A8MTJ6 420 aaPredicted RBP16.6■□□□□ 0.25
SMPD3-203ENST00000563226 WISP2O76076 250 aa16.6■□□□□ 0.25
SMPD3-203ENST00000563226 CCL2P13500 99 aa16.6■□□□□ 0.25
SMPD3-203ENST00000563226 HRH1P35367 487 aa16.6■□□□□ 0.25
SMPD3-203ENST00000563226 RNASE10Q5GAN6 216 aaKnown RBP16.6■□□□□ 0.25
SMPD3-203ENST00000563226 FAM89BQ8N5H3 189 aa16.6■□□□□ 0.25
SMPD3-203ENST00000563226 SPICQ8N5J4 248 aa16.6■□□□□ 0.25
SMPD3-203ENST00000563226 OR56B1Q8NGI3 324 aa16.6■□□□□ 0.25
SMPD3-203ENST00000563226 OR2T35Q8NGX2 323 aa16.6■□□□□ 0.25
SMPD3-203ENST00000563226 MRGPRFQ96AM1 343 aa16.6■□□□□ 0.25
SMPD3-203ENST00000563226 URM1Q9BTM9 101 aaKnown RBP16.6■□□□□ 0.25
SMPD3-203ENST00000563226 GHRLQ9UBU3 117 aa16.6■□□□□ 0.25
SMPD3-203ENST00000563226 SCP2D1Q9UJQ7 156 aa16.6■□□□□ 0.25
SMPD3-203ENST00000563226 TMEM82A0PJX8 343 aa16.59■□□□□ 0.25
SMPD3-203ENST00000563226 ANGPTL7O43827 346 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms