RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 PFDN1O60925 122 aa11.93□□□□□ -0.5
TPM1-215ENST00000558868 CHRM2P08172 466 aa11.93□□□□□ -0.5
TPM1-215ENST00000558868 SFTPCP11686 197 aa11.93□□□□□ -0.5
TPM1-215ENST00000558868 ZNF14P17017 642 aaPredicted RBP11.93□□□□□ -0.5
TPM1-215ENST00000558868 ACKR3P25106 362 aa11.93□□□□□ -0.5
TPM1-215ENST00000558868 OPRM1P35372 400 aa11.93□□□□□ -0.5
TPM1-215ENST00000558868 PTGFRP43088 359 aa11.93□□□□□ -0.5
TPM1-215ENST00000558868 FUT6P51993 359 aa11.93□□□□□ -0.5
TPM1-215ENST00000558868 EFNB2P52799 333 aa11.93□□□□□ -0.5
TPM1-215ENST00000558868 DGCR2P98153 550 aa11.93□□□□□ -0.5
TPM1-215ENST00000558868 PMPCAQ10713 525 aa11.93□□□□□ -0.5
TPM1-215ENST00000558868 KLRB1Q12918 225 aa11.93□□□□□ -0.5
TPM1-215ENST00000558868 DYRK1AQ13627 763 aa11.93□□□□□ -0.5
TPM1-215ENST00000558868 BHLHA15Q7RTS1 189 aaPredicted RBP11.93□□□□□ -0.5
TPM1-215ENST00000558868 CXorf67Q86X51 503 aaPredicted RBP11.93□□□□□ -0.5
TPM1-215ENST00000558868 FAM169BQ8N8A8 192 aa11.93□□□□□ -0.5
TPM1-215ENST00000558868 DEDD2Q8WXF8 326 aa11.93□□□□□ -0.5
TPM1-215ENST00000558868 ITPKCQ96DU7 683 aa11.93□□□□□ -0.5
TPM1-215ENST00000558868 ZC3HAV1LQ96H79 300 aaKnown RBP11.93□□□□□ -0.5
TPM1-215ENST00000558868 ZNF75AQ96N20 296 aa11.93□□□□□ -0.5
TPM1-215ENST00000558868 CST11Q9H112 138 aa11.93□□□□□ -0.5
TPM1-215ENST00000558868 OPN3Q9H1Y3 402 aaPredicted RBP11.93□□□□□ -0.5
TPM1-215ENST00000558868 GPR173Q9NS66 373 aa11.93□□□□□ -0.5
TPM1-215ENST00000558868 RBFOX1Q9NWB1 397 aaKnown RBP11.93□□□□□ -0.5
TPM1-215ENST00000558868 ZNF835Q9Y2P0 537 aa11.93□□□□□ -0.5
TPM1-215ENST00000558868 TRAV18A0A075B6X5 111 aa11.92□□□□□ -0.5
TPM1-215ENST00000558868 TMEM8BA6NDV4 472 aa11.92□□□□□ -0.5
TPM1-215ENST00000558868 TMEM14DPA8MWL7 114 aa11.92□□□□□ -0.5
TPM1-215ENST00000558868 MSTNO14793 375 aa11.92□□□□□ -0.5
TPM1-215ENST00000558868 ICMTO60725 284 aa11.92□□□□□ -0.5
TPM1-215ENST00000558868 TOXO94900 526 aa11.92□□□□□ -0.5
TPM1-215ENST00000558868 VSIG8P0DPA2 414 aa11.92□□□□□ -0.5
TPM1-215ENST00000558868 GLI4P10075 376 aa11.92□□□□□ -0.5
TPM1-215ENST00000558868 CCL2P13500 99 aa11.92□□□□□ -0.5
TPM1-215ENST00000558868 TUBG1P23258 451 aa11.92□□□□□ -0.5
TPM1-215ENST00000558868 IL32P24001 234 aa11.92□□□□□ -0.5
TPM1-215ENST00000558868 ATP1B3P54709 279 aa11.92□□□□□ -0.5
TPM1-215ENST00000558868 MTCP1P56278 107 aa11.92□□□□□ -0.5
TPM1-215ENST00000558868 QRFPP83859 136 aa11.92□□□□□ -0.5
TPM1-215ENST00000558868 SSBP1Q04837 148 aaKnown RBP11.92□□□□□ -0.5
TPM1-215ENST00000558868 GK2Q14410 553 aaPredicted RBP11.92□□□□□ -0.5
TPM1-215ENST00000558868 GPR176Q14439 515 aa11.92□□□□□ -0.5
TPM1-215ENST00000558868 KRT74Q7RTS7 529 aa11.92□□□□□ -0.5
TPM1-215ENST00000558868 NRARPQ7Z6K4 114 aa11.92□□□□□ -0.5
TPM1-215ENST00000558868 CDH24Q86UP0 819 aa11.92□□□□□ -0.5
TPM1-215ENST00000558868 DOLPP1Q86YN1 238 aa11.92□□□□□ -0.5
TPM1-215ENST00000558868 TNFAIP8L1Q8WVP5 186 aa11.92□□□□□ -0.5
TPM1-215ENST00000558868 ZCCHC14Q8WYQ9 949 aaKnown RBP11.92□□□□□ -0.5
TPM1-215ENST00000558868 SNRNP40Q96DI7 357 aaKnown RBP11.92□□□□□ -0.5
TPM1-215ENST00000558868 BORCS8Q96FH0 119 aa11.92□□□□□ -0.5
TPM1-215ENST00000558868 URM1Q9BTM9 101 aaKnown RBP11.92□□□□□ -0.5
TPM1-215ENST00000558868 SCPEP1Q9HB40 452 aa11.92□□□□□ -0.5
TPM1-215ENST00000558868 TUBG2Q9NRH3 451 aa11.92□□□□□ -0.5
TPM1-215ENST00000558868 PCDHB16Q9NRJ7 776 aa11.92□□□□□ -0.5
TPM1-215ENST00000558868 TAS2R8Q9NYW2 309 aa11.92□□□□□ -0.5
TPM1-215ENST00000558868 PTTG3PQ9NZH4 202 aa11.92□□□□□ -0.5
TPM1-215ENST00000558868 STARD10Q9Y365 291 aa11.92□□□□□ -0.5
TPM1-215ENST00000558868 CACNG2Q9Y698 323 aa11.92□□□□□ -0.5
TPM1-215ENST00000558868 GTF3C1Q12789 2109 aa11.92□□□□□ -0.5
TPM1-215ENST00000558868 FAM240BA0A1B0GVZ2 78 aa11.91□□□□□ -0.5
TPM1-215ENST00000558868 NAP1L6A6NFF2 107 aa11.91□□□□□ -0.5
TPM1-215ENST00000558868 OR5H1A6NKK0 313 aa11.91□□□□□ -0.5
TPM1-215ENST00000558868 RBBP9O75884 186 aa11.91□□□□□ -0.5
TPM1-215ENST00000558868 CST4P01036 141 aa11.91□□□□□ -0.5
TPM1-215ENST00000558868 CD3GP09693 182 aa11.91□□□□□ -0.5
TPM1-215ENST00000558868 NAT2P11245 290 aa11.91□□□□□ -0.5
TPM1-215ENST00000558868 PRSS3P35030 304 aa11.91□□□□□ -0.5
TPM1-215ENST00000558868 GDNFP39905 211 aa11.91□□□□□ -0.5
TPM1-215ENST00000558868 OR3A4PP47883 348 aa11.91□□□□□ -0.5
TPM1-215ENST00000558868 RFX2P48378 723 aa11.91□□□□□ -0.5
TPM1-215ENST00000558868 RBP2P50120 134 aa11.91□□□□□ -0.5
TPM1-215ENST00000558868 IDH3GP51553 393 aaPredicted RBP11.91□□□□□ -0.5
TPM1-215ENST00000558868 BCAP31P51572 246 aa11.91□□□□□ -0.5
TPM1-215ENST00000558868 PLA2G7Q13093 441 aa11.91□□□□□ -0.5
TPM1-215ENST00000558868 TNK1Q13470 666 aa11.91□□□□□ -0.5
TPM1-215ENST00000558868 PLCXD3Q63HM9 321 aa11.91□□□□□ -0.5
TPM1-215ENST00000558868 DNM1P46Q6ZS02 220 aa11.91□□□□□ -0.5
TPM1-215ENST00000558868 MOB3CQ70IA8 216 aa11.91□□□□□ -0.5
TPM1-215ENST00000558868 C1orf174Q8IYL3 243 aa11.91□□□□□ -0.5
TPM1-215ENST00000558868 WDR31Q8NA23 367 aa11.91□□□□□ -0.5
TPM1-215ENST00000558868 STEAP2Q8NFT2 490 aa11.91□□□□□ -0.5
TPM1-215ENST00000558868 OR52I2Q8NH67 350 aa11.91□□□□□ -0.5
TPM1-215ENST00000558868 NPRL2Q8WTW4 380 aa11.91□□□□□ -0.5
TPM1-215ENST00000558868 PIGCQ92535 297 aa11.91□□□□□ -0.5
TPM1-215ENST00000558868 PPP1R14BQ96C90 147 aa11.91□□□□□ -0.5
TPM1-215ENST00000558868 MS4A3Q96HJ5 214 aa11.91□□□□□ -0.5
TPM1-215ENST00000558868 SPACA5Q96QH8 159 aa11.91□□□□□ -0.5
TPM1-215ENST00000558868 HIST1H2AAQ96QV6 131 aa11.91□□□□□ -0.5
TPM1-215ENST00000558868 NKX3-1Q99801 234 aaPredicted RBP11.91□□□□□ -0.5
TPM1-215ENST00000558868 USB1Q9BQ65 265 aaKnown RBP11.91□□□□□ -0.5
TPM1-215ENST00000558868 ING4Q9UNL4 249 aa11.91□□□□□ -0.5
TPM1-215ENST00000558868 RBMX2Q9Y388 322 aaKnown RBP11.91□□□□□ -0.5
TPM1-215ENST00000558868 FUOMA2VDF0 154 aa11.9□□□□□ -0.5
TPM1-215ENST00000558868 LANCL1O43813 399 aa11.9□□□□□ -0.5
TPM1-215ENST00000558868 ORC5O43913 435 aa11.9□□□□□ -0.5
TPM1-215ENST00000558868 ZNF780AO75290 641 aaPredicted RBP11.9□□□□□ -0.5
TPM1-215ENST00000558868 IGKV3-15P01624 115 aa11.9□□□□□ -0.5
TPM1-215ENST00000558868 SPNP16150 400 aa11.9□□□□□ -0.5
TPM1-215ENST00000558868 SELEP16581 610 aa11.9□□□□□ -0.5
TPM1-215ENST00000558868 WNT5AP41221 380 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms