RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 RTL4Q6ZR62 310 aa4.88□□□□□ -1.63
MRE11-209ENST00000540013 FAM183BPQ6ZVS7 135 aa4.88□□□□□ -1.63
MRE11-209ENST00000540013 NCCRP1Q6ZVX7 275 aaPredicted RBP4.88□□□□□ -1.63
MRE11-209ENST00000540013 HIPK1Q86Z02 1210 aa4.88□□□□□ -1.63
MRE11-209ENST00000540013 HS3ST5Q8IZT8 346 aa4.88□□□□□ -1.63
MRE11-209ENST00000540013 DEFB106AQ8N104 65 aa4.88□□□□□ -1.63
MRE11-209ENST00000540013 ACOT4Q8N9L9 421 aa4.88□□□□□ -1.63
MRE11-209ENST00000540013 OR2G2Q8NGZ5 317 aa4.88□□□□□ -1.63
MRE11-209ENST00000540013 TEX47Q8TBZ9 253 aa4.88□□□□□ -1.63
MRE11-209ENST00000540013 DNASE2BQ8WZ79 361 aa4.88□□□□□ -1.63
MRE11-209ENST00000540013 BTN2A3PQ96KV6 586 aa4.88□□□□□ -1.63
MRE11-209ENST00000540013 KCTD14Q9BQ13 255 aaPredicted RBP4.88□□□□□ -1.63
MRE11-209ENST00000540013 CCDC28BQ9BUN5 200 aa4.88□□□□□ -1.63
MRE11-209ENST00000540013 LHX5Q9H2C1 402 aa4.88□□□□□ -1.63
MRE11-209ENST00000540013 SIAEQ9HAT2 523 aa4.88□□□□□ -1.63
MRE11-209ENST00000540013 ELL3Q9HB65 397 aaPredicted RBP4.88□□□□□ -1.63
MRE11-209ENST00000540013 CTPS2Q9NRF8 586 aa4.88□□□□□ -1.63
MRE11-209ENST00000540013 ING4Q9UNL4 249 aa4.88□□□□□ -1.63
MRE11-209ENST00000540013 TFR2Q9UP52 801 aa4.88□□□□□ -1.63
MRE11-209ENST00000540013 PLXNB3Q9ULL4 1909 aa4.87□□□□□ -1.63
MRE11-209ENST00000540013 TRBV5-4A0A0C4DH59 114 aa4.87□□□□□ -1.63
MRE11-209ENST00000540013 A0A1W2PQL4 384 aaPredicted RBP4.87□□□□□ -1.63
MRE11-209ENST00000540013 MSGN1A6NI15 193 aa4.87□□□□□ -1.63
MRE11-209ENST00000540013 EFCAB7A8K855 629 aa4.87□□□□□ -1.63
MRE11-209ENST00000540013 B4DXG7 233 aa4.87□□□□□ -1.63
MRE11-209ENST00000540013 F5H5T6 163 aa4.87□□□□□ -1.63
MRE11-209ENST00000540013 LOC110117498-PIK3R3F6TDL0 507 aa4.87□□□□□ -1.63
MRE11-209ENST00000540013 ATP8B1O43520 1251 aa4.87□□□□□ -1.63
MRE11-209ENST00000540013 CEACAM4O75871 244 aa4.87□□□□□ -1.63
MRE11-209ENST00000540013 UTS2O95399 124 aa4.87□□□□□ -1.63
MRE11-209ENST00000540013 CD55P08174 381 aa4.87□□□□□ -1.63
MRE11-209ENST00000540013 CT45A6P0DMU7 189 aa4.87□□□□□ -1.63
MRE11-209ENST00000540013 CT45A5P0DMU8 189 aa4.87□□□□□ -1.63
MRE11-209ENST00000540013 CT45A7P0DMV0 189 aa4.87□□□□□ -1.63
MRE11-209ENST00000540013 PLA2G2AP14555 144 aa4.87□□□□□ -1.63
MRE11-209ENST00000540013 UCHL3P15374 230 aa4.87□□□□□ -1.63
MRE11-209ENST00000540013 CSRP1P21291 193 aaKnown RBP4.87□□□□□ -1.63
MRE11-209ENST00000540013 HTR1FP30939 366 aa4.87□□□□□ -1.63
MRE11-209ENST00000540013 GNG10P50151 68 aa4.87□□□□□ -1.63
MRE11-209ENST00000540013 EFNA3P52797 238 aa4.87□□□□□ -1.63
MRE11-209ENST00000540013 LIM2P55344 173 aa4.87□□□□□ -1.63
MRE11-209ENST00000540013 TAS2R39P59534 338 aa4.87□□□□□ -1.63
MRE11-209ENST00000540013 NAB1Q13506 487 aa4.87□□□□□ -1.63
MRE11-209ENST00000540013 EIF4EBP2Q13542 120 aaPredicted RBP4.87□□□□□ -1.63
MRE11-209ENST00000540013 CT45A1Q5HYN5 189 aa4.87□□□□□ -1.63
MRE11-209ENST00000540013 FFAR4Q5NUL3 377 aa4.87□□□□□ -1.63
MRE11-209ENST00000540013 ACER2Q5QJU3 275 aa4.87□□□□□ -1.63
MRE11-209ENST00000540013 OR5M10Q6IEU7 315 aa4.87□□□□□ -1.63
MRE11-209ENST00000540013 NIPAL1Q6NVV3 410 aa4.87□□□□□ -1.63
MRE11-209ENST00000540013 SPSB3Q6PJ21 355 aa4.87□□□□□ -1.63
MRE11-209ENST00000540013 CHMP1BQ7LBR1 199 aa4.87□□□□□ -1.63
MRE11-209ENST00000540013 MRPL52Q86TS9 123 aaKnown RBP4.87□□□□□ -1.63
MRE11-209ENST00000540013 FAM71AQ8IYT1 594 aa4.87□□□□□ -1.63
MRE11-209ENST00000540013 CCDC71LQ8N9Z2 235 aa4.87□□□□□ -1.63
MRE11-209ENST00000540013 TMEM35BQ8NCS4 154 aa4.87□□□□□ -1.63
MRE11-209ENST00000540013 OR4K2Q8NGD2 314 aa4.87□□□□□ -1.63
MRE11-209ENST00000540013 OR2T11Q8NH01 316 aa4.87□□□□□ -1.63
MRE11-209ENST00000540013 CT45A3Q8NHU0 189 aa4.87□□□□□ -1.63
MRE11-209ENST00000540013 RFESDQ8TAC1 157 aa4.87□□□□□ -1.63
MRE11-209ENST00000540013 TFB1MQ8WVM0 346 aaKnown RBP4.87□□□□□ -1.63
MRE11-209ENST00000540013 YIPF6Q96EC8 236 aa4.87□□□□□ -1.63
MRE11-209ENST00000540013 POM121L2Q96KW2 1035 aa4.87□□□□□ -1.63
MRE11-209ENST00000540013 MCHR1Q99705 422 aa4.87□□□□□ -1.63
MRE11-209ENST00000540013 FOXC2Q99958 501 aa4.87□□□□□ -1.63
MRE11-209ENST00000540013 HOXD1Q9GZZ0 328 aa4.87□□□□□ -1.63
MRE11-209ENST00000540013 DDIT4Q9NX09 232 aa4.87□□□□□ -1.63
MRE11-209ENST00000540013 GIN1Q9NXP7 522 aa4.87□□□□□ -1.63
MRE11-209ENST00000540013 SLC25A37Q9NYZ2 338 aa4.87□□□□□ -1.63
MRE11-209ENST00000540013 MN1Q10571 1320 aaPredicted RBP4.87□□□□□ -1.63
MRE11-209ENST00000540013 FAM208BQ5VWN6 2430 aa4.87□□□□□ -1.63
MRE11-209ENST00000540013 ANKRD36A6QL64 1941 aa4.87□□□□□ -1.63
MRE11-209ENST00000540013 RP1P56715 2156 aa4.87□□□□□ -1.63
MRE11-209ENST00000540013 USP24Q9UPU5 2620 aa4.86□□□□□ -1.63
MRE11-209ENST00000540013 MYLKQ15746 1914 aa4.86□□□□□ -1.63
MRE11-209ENST00000540013 LOC100131303A0A0U1RQF7 123 aa4.86□□□□□ -1.63
MRE11-209ENST00000540013 SRRM3A6NNA2 597 aaPredicted RBP4.86□□□□□ -1.63
MRE11-209ENST00000540013 ERI3O43414 337 aaKnown RBP4.86□□□□□ -1.63
MRE11-209ENST00000540013 BUB3O43684 328 aa4.86□□□□□ -1.63
MRE11-209ENST00000540013 AQP8O94778 261 aa4.86□□□□□ -1.63
MRE11-209ENST00000540013 SEMA4FO95754 770 aa4.86□□□□□ -1.63
MRE11-209ENST00000540013 RPS17P08708 135 aaKnown RBP4.86□□□□□ -1.63
MRE11-209ENST00000540013 ZNF35P13682 527 aa4.86□□□□□ -1.63
MRE11-209ENST00000540013 NQO1P15559 274 aaKnown RBP4.86□□□□□ -1.63
MRE11-209ENST00000540013 IGFBP3P17936 291 aaPredicted RBP4.86□□□□□ -1.63
MRE11-209ENST00000540013 IGFBP5P24593 272 aa4.86□□□□□ -1.63
MRE11-209ENST00000540013 GSSP48637 474 aa4.86□□□□□ -1.63
MRE11-209ENST00000540013 RAP1GDS1P52306 607 aa4.86□□□□□ -1.63
MRE11-209ENST00000540013 CCL7P80098 99 aa4.86□□□□□ -1.63
MRE11-209ENST00000540013 CKAP4Q07065 602 aaKnown RBP4.86□□□□□ -1.63
MRE11-209ENST00000540013 DYNC1I2Q13409 638 aaKnown RBP4.86□□□□□ -1.63
MRE11-209ENST00000540013 ASAH1Q13510 395 aa4.86□□□□□ -1.63
MRE11-209ENST00000540013 PDK2Q15119 407 aa4.86□□□□□ -1.63
MRE11-209ENST00000540013 TMED2Q15363 201 aa4.86□□□□□ -1.63
MRE11-209ENST00000540013 TECRLQ5HYJ1 363 aa4.86□□□□□ -1.63
MRE11-209ENST00000540013 BRMS1LQ5PSV4 323 aa4.86□□□□□ -1.63
MRE11-209ENST00000540013 C9orf64Q5T6V5 341 aa4.86□□□□□ -1.63
MRE11-209ENST00000540013 REP15Q6BDI9 236 aa4.86□□□□□ -1.63
MRE11-209ENST00000540013 KRTAP5-11Q6L8G4 156 aa4.86□□□□□ -1.63
MRE11-209ENST00000540013 FBXL22Q6P050 247 aa4.86□□□□□ -1.63
MRE11-209ENST00000540013 C18orf65Q6ZTR6 163 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms