RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 PELI1Q96FA3 418 aa19.09■□□□□ 0.65
SFSWAP-204ENST00000535399 MRPL48Q96GC5 212 aaKnown RBP19.09■□□□□ 0.65
SFSWAP-204ENST00000535399 MICU1Q9BPX6 476 aa19.09■□□□□ 0.65
SFSWAP-204ENST00000535399 PIGLQ9Y2B2 252 aa19.09■□□□□ 0.65
SFSWAP-204ENST00000535399 NF1P21359 2839 aa19.09■□□□□ 0.65
SFSWAP-204ENST00000535399 A8MV72 311 aaPredicted RBP19.08■□□□□ 0.64
SFSWAP-204ENST00000535399 ZNF205O95201 554 aa19.08■□□□□ 0.64
SFSWAP-204ENST00000535399 FSTL3O95633 263 aa19.08■□□□□ 0.64
SFSWAP-204ENST00000535399 IRF2P14316 349 aa19.08■□□□□ 0.64
SFSWAP-204ENST00000535399 THBS2P35442 1172 aa19.08■□□□□ 0.64
SFSWAP-204ENST00000535399 ZNF154Q13106 437 aa19.08■□□□□ 0.64
SFSWAP-204ENST00000535399 ODF4Q2M2E3 257 aa19.08■□□□□ 0.64
SFSWAP-204ENST00000535399 ZNF826PQ6ZT77 177 aa19.08■□□□□ 0.64
SFSWAP-204ENST00000535399 ZNF771Q7L3S4 317 aaPredicted RBP19.08■□□□□ 0.64
SFSWAP-204ENST00000535399 DOK3Q7L591 496 aa19.08■□□□□ 0.64
SFSWAP-204ENST00000535399 THAP5Q7Z6K1 395 aa19.08■□□□□ 0.64
SFSWAP-204ENST00000535399 SYS1Q8N2H4 156 aa19.08■□□□□ 0.64
SFSWAP-204ENST00000535399 OR1M1Q8NGA1 313 aa19.08■□□□□ 0.64
SFSWAP-204ENST00000535399 RAB39BQ96DA2 213 aa19.08■□□□□ 0.64
SFSWAP-204ENST00000535399 MYCBPQ99417 103 aaPredicted RBP19.08■□□□□ 0.64
SFSWAP-204ENST00000535399 ISG20L2Q9H9L3 353 aaKnown RBP19.08■□□□□ 0.64
SFSWAP-204ENST00000535399 C1orf123Q9NWV4 160 aa19.08■□□□□ 0.64
SFSWAP-204ENST00000535399 RNF7Q9UBF6 113 aa19.08■□□□□ 0.64
SFSWAP-204ENST00000535399 ENPP5Q9UJA9 477 aa19.08■□□□□ 0.64
SFSWAP-204ENST00000535399 NIPBLQ6KC79 2804 aaeCLIP19.07■□□□□ 0.644e-13■□□□□ 8.8
SFSWAP-204ENST00000535399 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.07■□□□□ 0.641e-11■■■■□ 22.7
SFSWAP-204ENST00000535399 A6NLC8 198 aa19.07■□□□□ 0.64
SFSWAP-204ENST00000535399 DHRS7CA6NNS2 312 aa19.07■□□□□ 0.64
SFSWAP-204ENST00000535399 B4DSR2 109 aa19.07■□□□□ 0.64
SFSWAP-204ENST00000535399 TGFAP01135 160 aa19.07■□□□□ 0.64
SFSWAP-204ENST00000535399 LIMS3P0CW19 117 aa19.07■□□□□ 0.64
SFSWAP-204ENST00000535399 LIMS4P0CW20 117 aa19.07■□□□□ 0.64
SFSWAP-204ENST00000535399 MDH2P40926 338 aaKnown RBP19.07■□□□□ 0.64
SFSWAP-204ENST00000535399 NANOS3P60323 173 aaKnown RBP19.07■□□□□ 0.64
SFSWAP-204ENST00000535399 CSNK2BP67870 215 aa19.07■□□□□ 0.64
SFSWAP-204ENST00000535399 HOXA4Q00056 320 aaPredicted RBP19.07■□□□□ 0.64
SFSWAP-204ENST00000535399 TMEM42Q69YG0 159 aa19.07■□□□□ 0.64
SFSWAP-204ENST00000535399 FAM166AQ6J272 317 aa19.07■□□□□ 0.64
SFSWAP-204ENST00000535399 SPICQ8N5J4 248 aa19.07■□□□□ 0.64
SFSWAP-204ENST00000535399 RTL8AQ9BWD3 113 aa19.07■□□□□ 0.64
SFSWAP-204ENST00000535399 TLNRD1Q9H1K6 362 aa19.07■□□□□ 0.64
SFSWAP-204ENST00000535399 TMEM165Q9HC07 324 aa19.07■□□□□ 0.64
SFSWAP-204ENST00000535399 UBAP1Q9NZ09 502 aa19.07■□□□□ 0.64
SFSWAP-204ENST00000535399 FRRS1LQ9P0K9 344 aa19.07■□□□□ 0.64
SFSWAP-204ENST00000535399 A0A1B0GVI7 797 aa19.06■□□□□ 0.64
SFSWAP-204ENST00000535399 IRGMA1A4Y4 181 aa19.06■□□□□ 0.64
SFSWAP-204ENST00000535399 LMX1BO60663 402 aa19.06■□□□□ 0.64
SFSWAP-204ENST00000535399 ATP6V1G2O95670 118 aa19.06■□□□□ 0.64
SFSWAP-204ENST00000535399 DCKP27707 260 aa19.06■□□□□ 0.64
SFSWAP-204ENST00000535399 CEACAM21Q3KPI0 293 aa19.06■□□□□ 0.64
SFSWAP-204ENST00000535399 FAM76BQ5HYJ3 339 aa19.06■□□□□ 0.64
SFSWAP-204ENST00000535399 RDH10Q8IZV5 341 aa19.06■□□□□ 0.64
SFSWAP-204ENST00000535399 GGHQ92820 318 aa19.06■□□□□ 0.64
SFSWAP-204ENST00000535399 RNF170Q96K19 258 aa19.06■□□□□ 0.64
SFSWAP-204ENST00000535399 PPIAL4EA0A075B759 164 aa19.05■□□□□ 0.64
SFSWAP-204ENST00000535399 TMEM210A6NLX4 147 aa19.05■□□□□ 0.64
SFSWAP-204ENST00000535399 PPIAL4DF5H284 164 aa19.05■□□□□ 0.64
SFSWAP-204ENST00000535399 SYT7O43581 403 aa19.05■□□□□ 0.64
SFSWAP-204ENST00000535399 HTR1AP08908 422 aa19.05■□□□□ 0.64
SFSWAP-204ENST00000535399 UBCP0CG48 685 aaKnown RBP19.05■□□□□ 0.64
SFSWAP-204ENST00000535399 PPIAL4FP0DN26 164 aa19.05■□□□□ 0.64
SFSWAP-204ENST00000535399 ETV1P50549 477 aa19.05■□□□□ 0.64
SFSWAP-204ENST00000535399 CCR9P51686 369 aa19.05■□□□□ 0.64
SFSWAP-204ENST00000535399 CEP78Q5JTW2 689 aa19.05■□□□□ 0.64
SFSWAP-204ENST00000535399 MOB3CQ70IA8 216 aa19.05■□□□□ 0.64
SFSWAP-204ENST00000535399 MUC20Q8N307 709 aaPredicted RBP19.05■□□□□ 0.64
SFSWAP-204ENST00000535399 HIST1H2AAQ96QV6 131 aa19.05■□□□□ 0.64
SFSWAP-204ENST00000535399 VCX3BQ9H321 246 aa19.05■□□□□ 0.64
SFSWAP-204ENST00000535399 METTL17Q9H7H0 456 aaPredicted RBP19.05■□□□□ 0.64
SFSWAP-204ENST00000535399 PATZ1Q9HBE1 687 aaKnown RBP19.05■□□□□ 0.64
SFSWAP-204ENST00000535399 LPAR2Q9HBW0 351 aa19.05■□□□□ 0.64
SFSWAP-204ENST00000535399 KCNS2Q9ULS6 477 aa19.05■□□□□ 0.64
SFSWAP-204ENST00000535399 DIMT1Q9UNQ2 313 aaKnown RBP19.05■□□□□ 0.64
SFSWAP-204ENST00000535399 PPIAL4AQ9Y536 164 aa19.05■□□□□ 0.64
SFSWAP-204ENST00000535399 NAV3Q8IVL0 2385 aa19.05■□□□□ 0.64
SFSWAP-204ENST00000535399 MALRD1Q5VYJ5 2156 aa19.05■□□□□ 0.64
SFSWAP-204ENST00000535399 C2CD3Q4AC94 2353 aa19.04■□□□□ 0.64
SFSWAP-204ENST00000535399 LOC107986453A0A1B0GWG9 222 aa19.04■□□□□ 0.64
SFSWAP-204ENST00000535399 A6NIN4 97 aa19.04■□□□□ 0.64
SFSWAP-204ENST00000535399 OR4C45A6NMZ5 311 aa19.04■□□□□ 0.64
SFSWAP-204ENST00000535399 CEACAM18A8MTB9 384 aa19.04■□□□□ 0.64
SFSWAP-204ENST00000535399 E9PI62 339 aa19.04■□□□□ 0.64
SFSWAP-204ENST00000535399 F5H0A9 414 aaPredicted RBP19.04■□□□□ 0.64
SFSWAP-204ENST00000535399 H3BSH0 61 aa19.04■□□□□ 0.64
SFSWAP-204ENST00000535399 NRASP01111 189 aa19.04■□□□□ 0.64
SFSWAP-204ENST00000535399 LHBP01229 141 aa19.04■□□□□ 0.64
SFSWAP-204ENST00000535399 MSMBP08118 114 aa19.04■□□□□ 0.64
SFSWAP-204ENST00000535399 HOXB4P17483 251 aaPredicted RBP19.04■□□□□ 0.64
SFSWAP-204ENST00000535399 ALKBH1Q13686 389 aaKnown RBP19.04■□□□□ 0.64
SFSWAP-204ENST00000535399 ZNF404Q494X3 552 aa19.04■□□□□ 0.64
SFSWAP-204ENST00000535399 DMRTC1Q5HYR2 192 aa19.04■□□□□ 0.64
SFSWAP-204ENST00000535399 CLVS2Q5SYC1 327 aa19.04■□□□□ 0.64
SFSWAP-204ENST00000535399 KLHL36Q8N4N3 616 aa19.04■□□□□ 0.64
SFSWAP-204ENST00000535399 GCSAMQ8N6F7 178 aa19.04■□□□□ 0.64
SFSWAP-204ENST00000535399 C19orf18Q8NEA5 215 aa19.04■□□□□ 0.64
SFSWAP-204ENST00000535399 CCDC54Q8NEL0 328 aa19.04■□□□□ 0.64
SFSWAP-204ENST00000535399 TMEM246Q9BRR3 403 aa19.04■□□□□ 0.64
SFSWAP-204ENST00000535399 PLCXD1Q9NUJ7 323 aa19.04■□□□□ 0.64
SFSWAP-204ENST00000535399 hCG_1807616A0A1W2PRN6 198 aa19.03■□□□□ 0.64
SFSWAP-204ENST00000535399 XPNPEP2O43895 674 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms