RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 HACD1B0YJ81 288 aa3.56□□□□□ -1.84
HMGB1P3-201ENST00000502802 ZNF879B4DU55 563 aa3.56□□□□□ -1.84
HMGB1P3-201ENST00000502802 PANO1I0J062 215 aa3.56□□□□□ -1.84
HMGB1P3-201ENST00000502802 PSMD11O00231 422 aa3.56□□□□□ -1.84
HMGB1P3-201ENST00000502802 CD3GP09693 182 aa3.56□□□□□ -1.84
HMGB1P3-201ENST00000502802 KRTAP1-4P0C5Y4 121 aa3.56□□□□□ -1.84
HMGB1P3-201ENST00000502802 PGA4P0DJD7 388 aa3.56□□□□□ -1.84
HMGB1P3-201ENST00000502802 PGA3P0DJD8 388 aa3.56□□□□□ -1.84
HMGB1P3-201ENST00000502802 PGA5P0DJD9 388 aa3.56□□□□□ -1.84
HMGB1P3-201ENST00000502802 PRPS2P11908 318 aa3.56□□□□□ -1.84
HMGB1P3-201ENST00000502802 TCP1P17987 556 aaKnown RBP3.56□□□□□ -1.84
HMGB1P3-201ENST00000502802 IVDP26440 423 aa3.56□□□□□ -1.84
HMGB1P3-201ENST00000502802 HOXA9P31269 272 aa3.56□□□□□ -1.84
HMGB1P3-201ENST00000502802 RPS10P46783 165 aaKnown RBP3.56□□□□□ -1.84
HMGB1P3-201ENST00000502802 CSNK1A1P48729 337 aa3.56□□□□□ -1.84
HMGB1P3-201ENST00000502802 KRTAP10-12P60413 245 aa3.56□□□□□ -1.84
HMGB1P3-201ENST00000502802 UBE2NP61088 152 aaKnown RBP3.56□□□□□ -1.84
HMGB1P3-201ENST00000502802 PSMC5P62195 406 aa3.56□□□□□ -1.84
HMGB1P3-201ENST00000502802 RPS23P62266 143 aaKnown RBP3.56□□□□□ -1.84
HMGB1P3-201ENST00000502802 FKBP1AP62942 108 aaKnown RBP3.56□□□□□ -1.84
HMGB1P3-201ENST00000502802 SLAQ13239 276 aa3.56□□□□□ -1.84
HMGB1P3-201ENST00000502802 PON2Q15165 354 aa3.56□□□□□ -1.84
HMGB1P3-201ENST00000502802 RGNQ15493 299 aa3.56□□□□□ -1.84
HMGB1P3-201ENST00000502802 Q3ZCU0 254 aa3.56□□□□□ -1.84
HMGB1P3-201ENST00000502802 C6orf183Q5T699 404 aa3.56□□□□□ -1.84
HMGB1P3-201ENST00000502802 PLET1Q6UQ28 207 aa3.56□□□□□ -1.84
HMGB1P3-201ENST00000502802 NCCRP1Q6ZVX7 275 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P3-201ENST00000502802 RNF175Q8N4F7 328 aa3.56□□□□□ -1.84
HMGB1P3-201ENST00000502802 MDS2Q8NDY4 140 aa3.56□□□□□ -1.84
HMGB1P3-201ENST00000502802 RNF138Q8WVD3 245 aa3.56□□□□□ -1.84
HMGB1P3-201ENST00000502802 BAALCQ8WXS3 180 aa3.56□□□□□ -1.84
HMGB1P3-201ENST00000502802 RGP1Q92546 391 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P3-201ENST00000502802 SCGB3A2Q96PL1 93 aa3.56□□□□□ -1.84
HMGB1P3-201ENST00000502802 UQCC2Q9BRT2 126 aa3.56□□□□□ -1.84
HMGB1P3-201ENST00000502802 CHID1Q9BWS9 393 aa3.56□□□□□ -1.84
HMGB1P3-201ENST00000502802 ARMC7Q9H6L4 198 aa3.56□□□□□ -1.84
HMGB1P3-201ENST00000502802 ASB8Q9H765 288 aa3.56□□□□□ -1.84
HMGB1P3-201ENST00000502802 FOCADQ5VW36 1801 aa3.56□□□□□ -1.84
HMGB1P3-201ENST00000502802 GTF3C1Q12789 2109 aa3.55□□□□□ -1.84
HMGB1P3-201ENST00000502802 MN1Q10571 1320 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P3-201ENST00000502802 MYH1P12882 1939 aa3.55□□□□□ -1.84
HMGB1P3-201ENST00000502802 ALPK3Q96L96 1907 aa3.55□□□□□ -1.84
HMGB1P3-201ENST00000502802 OR6C74A6NCV1 312 aa3.55□□□□□ -1.84
HMGB1P3-201ENST00000502802 ANKRD65E5RJM6 399 aa3.55□□□□□ -1.84
HMGB1P3-201ENST00000502802 INS-IGF2F8WCM5 200 aa3.55□□□□□ -1.84
HMGB1P3-201ENST00000502802 M0QX08 132 aa3.55□□□□□ -1.84
HMGB1P3-201ENST00000502802 GMDSO60547 372 aa3.55□□□□□ -1.84
HMGB1P3-201ENST00000502802 HLA-DPB1P04440 258 aa3.55□□□□□ -1.84
HMGB1P3-201ENST00000502802 OR8U9P0C7N5 309 aa3.55□□□□□ -1.84
HMGB1P3-201ENST00000502802 ADRB3P13945 408 aa3.55□□□□□ -1.84
HMGB1P3-201ENST00000502802 GABRG2P18507 467 aa3.55□□□□□ -1.84
HMGB1P3-201ENST00000502802 PFN2P35080 140 aa3.55□□□□□ -1.84
HMGB1P3-201ENST00000502802 HCAR3P49019 387 aa3.55□□□□□ -1.84
HMGB1P3-201ENST00000502802 CCR6P51684 374 aa3.55□□□□□ -1.84
HMGB1P3-201ENST00000502802 AP1S2P56377 157 aa3.55□□□□□ -1.84
HMGB1P3-201ENST00000502802 TAS2R39P59534 338 aa3.55□□□□□ -1.84
HMGB1P3-201ENST00000502802 DGCR6Q14129 220 aa3.55□□□□□ -1.84
HMGB1P3-201ENST00000502802 LIN9Q5TKA1 542 aa3.55□□□□□ -1.84
HMGB1P3-201ENST00000502802 C16orf87Q6PH81 154 aa3.55□□□□□ -1.84
HMGB1P3-201ENST00000502802 PRSS58Q8IYP2 241 aa3.55□□□□□ -1.84
HMGB1P3-201ENST00000502802 METTL13Q8N6R0 699 aa3.55□□□□□ -1.84
HMGB1P3-201ENST00000502802 FAM86B1Q8N7N1 296 aa3.55□□□□□ -1.84
HMGB1P3-201ENST00000502802 C11orf72Q8NBR9 251 aa3.55□□□□□ -1.84
HMGB1P3-201ENST00000502802 OR8U1Q8NH10 309 aa3.55□□□□□ -1.84
HMGB1P3-201ENST00000502802 LRRC20Q8TCA0 184 aa3.55□□□□□ -1.84
HMGB1P3-201ENST00000502802 TFGQ92734 400 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P3-201ENST00000502802 EXOSC8Q96B26 276 aaKnown RBP3.55□□□□□ -1.84
HMGB1P3-201ENST00000502802 RCN3Q96D15 328 aa3.55□□□□□ -1.84
HMGB1P3-201ENST00000502802 BTN2A3PQ96KV6 586 aa3.55□□□□□ -1.84
HMGB1P3-201ENST00000502802 ZNF681Q96N22 645 aa3.55□□□□□ -1.84
HMGB1P3-201ENST00000502802 EDA2RQ9HAV5 297 aa3.55□□□□□ -1.84
HMGB1P3-201ENST00000502802 PRG3Q9Y2Y8 225 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P3-201ENST00000502802 DOCK1Q14185 1865 aa3.55□□□□□ -1.84
HMGB1P3-201ENST00000502802 TRIOBPQ9H2D6 2365 aa3.55□□□□□ -1.84
HMGB1P3-201ENST00000502802 SIPA1L1O43166 1804 aa3.54□□□□□ -1.84
HMGB1P3-201ENST00000502802 TRBV6-6A0A0A6YYG2 114 aa3.54□□□□□ -1.84
HMGB1P3-201ENST00000502802 IGHV3-66A0A0C4DH42 116 aa3.54□□□□□ -1.84
HMGB1P3-201ENST00000502802 ANP32AP39687 249 aaKnown RBP3.54□□□□□ -1.84
HMGB1P3-201ENST00000502802 CKAP4Q07065 602 aaKnown RBP3.54□□□□□ -1.84
HMGB1P3-201ENST00000502802 KIR2DS1Q14954 304 aa3.54□□□□□ -1.84
HMGB1P3-201ENST00000502802 CYB5R2Q6BCY4 276 aa3.54□□□□□ -1.84
HMGB1P3-201ENST00000502802 PCP2Q8IVA1 136 aa3.54□□□□□ -1.84
HMGB1P3-201ENST00000502802 COX18Q8N8Q8 333 aa3.54□□□□□ -1.84
HMGB1P3-201ENST00000502802 OR11H7Q8NGC8 314 aa3.54□□□□□ -1.84
HMGB1P3-201ENST00000502802 OR10W1Q8NGF6 305 aa3.54□□□□□ -1.84
HMGB1P3-201ENST00000502802 OR8D1Q8WZ84 308 aa3.54□□□□□ -1.84
HMGB1P3-201ENST00000502802 SGTBQ96EQ0 304 aa3.54□□□□□ -1.84
HMGB1P3-201ENST00000502802 SPNS1Q9H2V7 528 aa3.54□□□□□ -1.84
HMGB1P3-201ENST00000502802 IFI27L2Q9H2X8 130 aa3.54□□□□□ -1.84
HMGB1P3-201ENST00000502802 MED4Q9NPJ6 270 aa3.54□□□□□ -1.84
HMGB1P3-201ENST00000502802 MYH8P13535 1937 aa3.54□□□□□ -1.84
HMGB1P3-201ENST00000502802 PRUNE2Q8WUY3 3088 aa3.54□□□□□ -1.84
HMGB1P3-201ENST00000502802 LAMA3Q16787 3333 aa3.54□□□□□ -1.84
HMGB1P3-201ENST00000502802 PLXNB2O15031 1838 aa3.54□□□□□ -1.84
HMGB1P3-201ENST00000502802 ASTN1O14525 1302 aa3.53□□□□□ -1.84
HMGB1P3-201ENST00000502802 PINLYPA6NC86 204 aa3.53□□□□□ -1.84
HMGB1P3-201ENST00000502802 ANKRD63C9JTQ0 380 aa3.53□□□□□ -1.84
HMGB1P3-201ENST00000502802 ENTPD5O75356 428 aa3.53□□□□□ -1.84
HMGB1P3-201ENST00000502802 PAHP00439 452 aa3.53□□□□□ -1.84
HMGB1P3-201ENST00000502802 APOA1P02647 267 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms