RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 SCPEP1Q9HB40 452 aa8.92□□□□□ -0.98
HDAC3-214ENST00000495485 OBP2BQ9NPH6 170 aa8.92□□□□□ -0.98
HDAC3-214ENST00000495485 PLSCR4Q9NRQ2 329 aa8.92□□□□□ -0.98
HDAC3-214ENST00000495485 COQ3Q9NZJ6 369 aa8.92□□□□□ -0.98
HDAC3-214ENST00000495485 EIF3KQ9UBQ5 218 aaKnown RBP8.92□□□□□ -0.98
HDAC3-214ENST00000495485 KCNN3Q9UGI6 736 aa8.92□□□□□ -0.98
HDAC3-214ENST00000495485 PROCRQ9UNN8 238 aa8.92□□□□□ -0.98
HDAC3-214ENST00000495485 MRPS28Q9Y2Q9 187 aaKnown RBP8.92□□□□□ -0.98
HDAC3-214ENST00000495485 CACNG2Q9Y698 323 aa8.92□□□□□ -0.98
HDAC3-214ENST00000495485 A0A096LPE4 126 aa8.91□□□□□ -0.98
HDAC3-214ENST00000495485 ZNF816-ZNF321PA0A0X1KG74 233 aa8.91□□□□□ -0.98
HDAC3-214ENST00000495485 A0A1W2PPZ6 126 aa8.91□□□□□ -0.98
HDAC3-214ENST00000495485 MBD3L4A6NDZ8 208 aaPredicted RBP8.91□□□□□ -0.98
HDAC3-214ENST00000495485 MBD3L3A6NE82 208 aaPredicted RBP8.91□□□□□ -0.98
HDAC3-214ENST00000495485 MBD3L5A6NJ08 208 aaPredicted RBP8.91□□□□□ -0.98
HDAC3-214ENST00000495485 ZNF780AO75290 641 aaPredicted RBP8.91□□□□□ -0.98
HDAC3-214ENST00000495485 AGFG2O95081 481 aa8.91□□□□□ -0.98
HDAC3-214ENST00000495485 IL18BPO95998 194 aa8.91□□□□□ -0.98
HDAC3-214ENST00000495485 DHFRP00374 187 aa8.91□□□□□ -0.98
HDAC3-214ENST00000495485 NRASP01111 189 aa8.91□□□□□ -0.98
HDAC3-214ENST00000495485 DBHP09172 617 aa8.91□□□□□ -0.98
HDAC3-214ENST00000495485 TUBG1P23258 451 aa8.91□□□□□ -0.98
HDAC3-214ENST00000495485 ALDH3B1P43353 468 aa8.91□□□□□ -0.98
HDAC3-214ENST00000495485 UQCRFS1P47985 274 aa8.91□□□□□ -0.98
HDAC3-214ENST00000495485 ATP1B3P54709 279 aa8.91□□□□□ -0.98
HDAC3-214ENST00000495485 P2RY6Q15077 328 aa8.91□□□□□ -0.98
HDAC3-214ENST00000495485 ACSF3Q4G176 576 aaPredicted RBP8.91□□□□□ -0.98
HDAC3-214ENST00000495485 C9orf135Q5VTT2 229 aa8.91□□□□□ -0.98
HDAC3-214ENST00000495485 RSBN1Q5VWQ0 802 aaPredicted RBP8.91□□□□□ -0.98
HDAC3-214ENST00000495485 TFAP2EQ6VUC0 442 aa8.91□□□□□ -0.98
HDAC3-214ENST00000495485 MRPL21Q7Z2W9 205 aaKnown RBP8.91□□□□□ -0.98
HDAC3-214ENST00000495485 NAA40Q86UY6 237 aa8.91□□□□□ -0.98
HDAC3-214ENST00000495485 C1orf174Q8IYL3 243 aa8.91□□□□□ -0.98
HDAC3-214ENST00000495485 C17orf78Q8N4C9 275 aa8.91□□□□□ -0.98
HDAC3-214ENST00000495485 STEAP2Q8NFT2 490 aa8.91□□□□□ -0.98
HDAC3-214ENST00000495485 OR51A2Q8NGJ7 313 aa8.91□□□□□ -0.98
HDAC3-214ENST00000495485 OR5M9Q8NGP3 310 aa8.91□□□□□ -0.98
HDAC3-214ENST00000495485 MBD3L2Q8NHZ7 208 aaPredicted RBP8.91□□□□□ -0.98
HDAC3-214ENST00000495485 SSC4DQ8WTU2 575 aa8.91□□□□□ -0.98
HDAC3-214ENST00000495485 SLC7A6Q92536 515 aa8.91□□□□□ -0.98
HDAC3-214ENST00000495485 RND1Q92730 232 aa8.91□□□□□ -0.98
HDAC3-214ENST00000495485 YIPF5Q969M3 257 aa8.91□□□□□ -0.98
HDAC3-214ENST00000495485 SPSB4Q96A44 273 aa8.91□□□□□ -0.98
HDAC3-214ENST00000495485 CREB3L1Q96BA8 519 aa8.91□□□□□ -0.98
HDAC3-214ENST00000495485 BORCS8Q96FH0 119 aa8.91□□□□□ -0.98
HDAC3-214ENST00000495485 LRRC46Q96FV0 321 aa8.91□□□□□ -0.98
HDAC3-214ENST00000495485 BOD1Q96IK1 185 aa8.91□□□□□ -0.98
HDAC3-214ENST00000495485 LYZL4Q96KX0 146 aa8.91□□□□□ -0.98
HDAC3-214ENST00000495485 HIST1H2AAQ96QV6 131 aa8.91□□□□□ -0.98
HDAC3-214ENST00000495485 TUBG2Q9NRH3 451 aa8.91□□□□□ -0.98
HDAC3-214ENST00000495485 ZNF319Q9P2F9 582 aa8.91□□□□□ -0.98
HDAC3-214ENST00000495485 ZNF629Q9UEG4 869 aaPredicted RBP8.91□□□□□ -0.98
HDAC3-214ENST00000495485 CGGBP1Q9UFW8 167 aaPredicted RBP8.91□□□□□ -0.98
HDAC3-214ENST00000495485 PRSS50Q9UI38 385 aa8.91□□□□□ -0.98
HDAC3-214ENST00000495485 ZNF107Q9UII5 783 aaPredicted RBP8.91□□□□□ -0.98
HDAC3-214ENST00000495485 ERRFI1Q9UJM3 462 aaPredicted RBP8.91□□□□□ -0.98
HDAC3-214ENST00000495485 HECTD1Q9ULT8 2610 aa8.9□□□□□ -0.98
HDAC3-214ENST00000495485 CRYBG3Q68DQ2 2970 aa8.9□□□□□ -0.98
HDAC3-214ENST00000495485 TRAV18A0A075B6X5 111 aa8.9□□□□□ -0.98
HDAC3-214ENST00000495485 C5orf49A4QMS7 147 aa8.9□□□□□ -0.98
HDAC3-214ENST00000495485 A6NIN4 97 aa8.9□□□□□ -0.98
HDAC3-214ENST00000495485 H3BUI4 141 aa8.9□□□□□ -0.98
HDAC3-214ENST00000495485 PLA2G10O15496 165 aa8.9□□□□□ -0.98
HDAC3-214ENST00000495485 LMX1BO60663 402 aa8.9□□□□□ -0.98
HDAC3-214ENST00000495485 KDM4BO94953 1096 aa8.9□□□□□ -0.98
HDAC3-214ENST00000495485 HLA-HP01893 362 aa8.9□□□□□ -0.98
HDAC3-214ENST00000495485 HNRNPCP07910 306 aaKnown RBP eCLIP8.9□□□□□ -0.98
HDAC3-214ENST00000495485 PATE4P0C8F1 98 aa8.9□□□□□ -0.98
HDAC3-214ENST00000495485 CCNOP22674 350 aa8.9□□□□□ -0.98
HDAC3-214ENST00000495485 CHRNB4P30926 498 aa8.9□□□□□ -0.98
HDAC3-214ENST00000495485 RCVRNP35243 200 aa8.9□□□□□ -0.98
HDAC3-214ENST00000495485 GDNFP39905 211 aa8.9□□□□□ -0.98
HDAC3-214ENST00000495485 PTH2RP49190 550 aa8.9□□□□□ -0.98
HDAC3-214ENST00000495485 RBP2P50120 134 aa8.9□□□□□ -0.98
HDAC3-214ENST00000495485 FUT6P51993 359 aa8.9□□□□□ -0.98
HDAC3-214ENST00000495485 PMPCAQ10713 525 aa8.9□□□□□ -0.98
HDAC3-214ENST00000495485 MADCAM1Q13477 382 aa8.9□□□□□ -0.98
HDAC3-214ENST00000495485 KISS1Q15726 138 aa8.9□□□□□ -0.98
HDAC3-214ENST00000495485 SNAI3Q3KNW1 292 aa8.9□□□□□ -0.98
HDAC3-214ENST00000495485 TBRG1Q3YBR2 411 aa8.9□□□□□ -0.98
HDAC3-214ENST00000495485 ASPHD2Q6ICH7 369 aa8.9□□□□□ -0.98
HDAC3-214ENST00000495485 GLIPR1L1Q6UWM5 242 aa8.9□□□□□ -0.98
HDAC3-214ENST00000495485 COLCA1Q6ZS62 124 aa8.9□□□□□ -0.98
HDAC3-214ENST00000495485 OR56B1Q8NGI3 324 aa8.9□□□□□ -0.98
HDAC3-214ENST00000495485 PIGTQ969N2 578 aa8.9□□□□□ -0.98
HDAC3-214ENST00000495485 TRIM63Q969Q1 353 aa8.9□□□□□ -0.98
HDAC3-214ENST00000495485 POM121Q96HA1 1249 aa8.9□□□□□ -0.98
HDAC3-214ENST00000495485 METTL9Q9H1A3 318 aa8.9□□□□□ -0.98
HDAC3-214ENST00000495485 CDH20Q9HBT6 801 aa8.9□□□□□ -0.98
HDAC3-214ENST00000495485 TINAGQ9UJW2 476 aa8.9□□□□□ -0.98
HDAC3-214ENST00000495485 ING4Q9UNL4 249 aa8.9□□□□□ -0.98
HDAC3-214ENST00000495485 KLF2Q9Y5W3 355 aaPredicted RBP8.9□□□□□ -0.98
HDAC3-214ENST00000495485 NUBP2Q9Y5Y2 271 aa8.9□□□□□ -0.98
HDAC3-214ENST00000495485 LDLRAD4O15165 306 aa8.89□□□□□ -0.99
HDAC3-214ENST00000495485 CSTBP04080 98 aaKnown RBP8.89□□□□□ -0.99
HDAC3-214ENST00000495485 LPLP06858 475 aa8.89□□□□□ -0.99
HDAC3-214ENST00000495485 CD3GP09693 182 aa8.89□□□□□ -0.99
HDAC3-214ENST00000495485 TMIGD3P0DMS9 266 aaPredicted RBP8.89□□□□□ -0.99
HDAC3-214ENST00000495485 SELEP16581 610 aa8.89□□□□□ -0.99
HDAC3-214ENST00000495485 FAHP16930 419 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms