RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 IGHV3OR15-7A0A075B7D8 119 aa7.62□□□□□ -1.19
HDAC6-232ENST00000489053 IGHV3OR16-10A0A075B7F0 116 aa7.62□□□□□ -1.19
HDAC6-232ENST00000489053 A0A0U1RQV5 110 aa7.62□□□□□ -1.19
HDAC6-232ENST00000489053 CCDC182A6NF36 153 aa7.62□□□□□ -1.19
HDAC6-232ENST00000489053 ZAR1LA6NP61 321 aa7.62□□□□□ -1.19
HDAC6-232ENST00000489053 M0R129 80 aa7.62□□□□□ -1.19
HDAC6-232ENST00000489053 NDUFB3O43676 98 aa7.62□□□□□ -1.19
HDAC6-232ENST00000489053 RPP14O95059 124 aaKnown RBP7.62□□□□□ -1.19
HDAC6-232ENST00000489053 VENTXO95231 258 aa7.62□□□□□ -1.19
HDAC6-232ENST00000489053 ECDO95905 644 aaPredicted RBP7.62□□□□□ -1.19
HDAC6-232ENST00000489053 CST4P01036 141 aa7.62□□□□□ -1.19
HDAC6-232ENST00000489053 AVPP01185 164 aa7.62□□□□□ -1.19
HDAC6-232ENST00000489053 LIPFP07098 398 aa7.62□□□□□ -1.19
HDAC6-232ENST00000489053 OCM2P0CE71 109 aa7.62□□□□□ -1.19
HDAC6-232ENST00000489053 OCMP0CE72 109 aaPredicted RBP7.62□□□□□ -1.19
HDAC6-232ENST00000489053 PPIAL4GP0DN37 164 aa7.62□□□□□ -1.19
HDAC6-232ENST00000489053 MUC1P15941 1255 aaPredicted RBP7.62□□□□□ -1.19
HDAC6-232ENST00000489053 DCTDP32321 178 aa7.62□□□□□ -1.19
HDAC6-232ENST00000489053 GPM6AP51674 278 aa7.62□□□□□ -1.19
HDAC6-232ENST00000489053 GNG3P63215 75 aa7.62□□□□□ -1.19
HDAC6-232ENST00000489053 CSNK2BP67870 215 aa7.62□□□□□ -1.19
HDAC6-232ENST00000489053 ROM1Q03395 351 aa7.62□□□□□ -1.19
HDAC6-232ENST00000489053 BAMBIQ13145 260 aa7.62□□□□□ -1.19
HDAC6-232ENST00000489053 LRRC10Q5BKY1 277 aa7.62□□□□□ -1.19
HDAC6-232ENST00000489053 LYPD2Q6UXB3 125 aa7.62□□□□□ -1.19
HDAC6-232ENST00000489053 CMTM4Q8IZR5 234 aa7.62□□□□□ -1.19
HDAC6-232ENST00000489053 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.62□□□□□ -1.19
HDAC6-232ENST00000489053 OR10H4Q8NGA5 316 aa7.62□□□□□ -1.19
HDAC6-232ENST00000489053 OR8J1Q8NGP2 316 aa7.62□□□□□ -1.19
HDAC6-232ENST00000489053 ZNF671Q8TAW3 534 aa7.62□□□□□ -1.19
HDAC6-232ENST00000489053 OR51E1Q8TCB6 317 aa7.62□□□□□ -1.19
HDAC6-232ENST00000489053 STMN2Q93045 179 aa7.62□□□□□ -1.19
HDAC6-232ENST00000489053 ITFG2Q969R8 447 aa7.62□□□□□ -1.19
HDAC6-232ENST00000489053 DUS3LQ96G46 650 aaKnown RBP7.62□□□□□ -1.19
HDAC6-232ENST00000489053 MRPL48Q96GC5 212 aaKnown RBP7.62□□□□□ -1.19
HDAC6-232ENST00000489053 OR8B4Q96RC9 309 aa7.62□□□□□ -1.19
HDAC6-232ENST00000489053 MYCBPQ99417 103 aaPredicted RBP7.62□□□□□ -1.19
HDAC6-232ENST00000489053 TBX5Q99593 518 aa7.62□□□□□ -1.19
HDAC6-232ENST00000489053 ZMAT3Q9HA38 289 aaKnown RBP7.62□□□□□ -1.19
HDAC6-232ENST00000489053 OPN4Q9UHM6 478 aa7.62□□□□□ -1.19
HDAC6-232ENST00000489053 SNX5Q9Y5X3 404 aa7.62□□□□□ -1.19
HDAC6-232ENST00000489053 TRAV40A0A0B4J280 105 aa7.61□□□□□ -1.19
HDAC6-232ENST00000489053 KIR2DS1A0A191URI9 304 aa7.61□□□□□ -1.19
HDAC6-232ENST00000489053 A0A1B0GVI7 797 aa7.61□□□□□ -1.19
HDAC6-232ENST00000489053 OR5B21A6NL26 309 aa7.61□□□□□ -1.19
HDAC6-232ENST00000489053 DVL1O14640 695 aa7.61□□□□□ -1.19
HDAC6-232ENST00000489053 TOX4O94842 621 aa7.61□□□□□ -1.19
HDAC6-232ENST00000489053 PTBP3O95758 552 aaKnown RBP7.61□□□□□ -1.19
HDAC6-232ENST00000489053 HTR1FP30939 366 aa7.61□□□□□ -1.19
HDAC6-232ENST00000489053 CAPZA1P52907 286 aa7.61□□□□□ -1.19
HDAC6-232ENST00000489053 FGF12P61328 243 aa7.61□□□□□ -1.19
HDAC6-232ENST00000489053 PAX8Q06710 450 aa7.61□□□□□ -1.19
HDAC6-232ENST00000489053 EGR3Q06889 387 aa7.61□□□□□ -1.19
HDAC6-232ENST00000489053 IKZF1Q13422 519 aa7.61□□□□□ -1.19
HDAC6-232ENST00000489053 TMED1Q13445 227 aa7.61□□□□□ -1.19
HDAC6-232ENST00000489053 KPNB1Q14974 876 aaKnown RBP7.61□□□□□ -1.19
HDAC6-232ENST00000489053 CEP78Q5JTW2 689 aa7.61□□□□□ -1.19
HDAC6-232ENST00000489053 ZNF684Q5T5D7 378 aa7.61□□□□□ -1.19
HDAC6-232ENST00000489053 C12orf73Q69YU5 71 aa7.61□□□□□ -1.19
HDAC6-232ENST00000489053 C1orf229Q6ZS94 237 aaPredicted RBP7.61□□□□□ -1.19
HDAC6-232ENST00000489053 MOB3CQ70IA8 216 aa7.61□□□□□ -1.19
HDAC6-232ENST00000489053 PRSS45Q7RTY3 260 aa7.61□□□□□ -1.19
HDAC6-232ENST00000489053 BCDIN3DQ7Z5W3 292 aaKnown RBP7.61□□□□□ -1.19
HDAC6-232ENST00000489053 GCSAMQ8N6F7 178 aa7.61□□□□□ -1.19
HDAC6-232ENST00000489053 SIGLECL1Q8N7X8 197 aa7.61□□□□□ -1.19
HDAC6-232ENST00000489053 C3orf56Q8N813 242 aa7.61□□□□□ -1.19
HDAC6-232ENST00000489053 SCCPDHQ8NBX0 429 aa7.61□□□□□ -1.19
HDAC6-232ENST00000489053 OR5P3Q8WZ94 311 aa7.61□□□□□ -1.19
HDAC6-232ENST00000489053 H1FXQ92522 213 aaKnown RBP7.61□□□□□ -1.19
HDAC6-232ENST00000489053 RPL3LQ92901 407 aaKnown RBP7.61□□□□□ -1.19
HDAC6-232ENST00000489053 SLC25A28Q96A46 364 aa7.61□□□□□ -1.19
HDAC6-232ENST00000489053 C12orf43Q96C57 262 aaKnown RBP7.61□□□□□ -1.19
HDAC6-232ENST00000489053 ITPKCQ96DU7 683 aa7.61□□□□□ -1.19
HDAC6-232ENST00000489053 CCL13Q99616 98 aa7.61□□□□□ -1.19
HDAC6-232ENST00000489053 APOL4Q9BPW4 351 aa7.61□□□□□ -1.19
HDAC6-232ENST00000489053 FAM206AQ9NX38 181 aa7.61□□□□□ -1.19
HDAC6-232ENST00000489053 ONECUT1Q9UBC0 465 aa7.61□□□□□ -1.19
HDAC6-232ENST00000489053 NUFIP1Q9UHK0 495 aaKnown RBP7.61□□□□□ -1.19
HDAC6-232ENST00000489053 SLC7A11Q9UPY5 501 aa7.61□□□□□ -1.19
HDAC6-232ENST00000489053 R4GMQ9 66 aa7.61□□□□□ -1.19
HDAC6-232ENST00000489053 DYSFO75923 2080 aa7.61□□□□□ -1.19
HDAC6-232ENST00000489053 YLPM1P49750 1951 aaKnown RBP7.6□□□□□ -1.19
HDAC6-232ENST00000489053 A0A1W2PQ09 198 aa7.6□□□□□ -1.19
HDAC6-232ENST00000489053 ZNF732B4DXR9 585 aa7.6□□□□□ -1.19
HDAC6-232ENST00000489053 P2RY10O00398 339 aa7.6□□□□□ -1.19
HDAC6-232ENST00000489053 EI24O14681 340 aa7.6□□□□□ -1.19
HDAC6-232ENST00000489053 GPR37O15354 613 aa7.6□□□□□ -1.19
HDAC6-232ENST00000489053 DHRS3O75911 302 aa7.6□□□□□ -1.19
HDAC6-232ENST00000489053 SERPINA3P01011 423 aa7.6□□□□□ -1.19
HDAC6-232ENST00000489053 NRASP01111 189 aa7.6□□□□□ -1.19
HDAC6-232ENST00000489053 OR2T7P0C7T2 308 aa7.6□□□□□ -1.19
HDAC6-232ENST00000489053 FAHP16930 419 aa7.6□□□□□ -1.19
HDAC6-232ENST00000489053 ANOS1P23352 680 aa7.6□□□□□ -1.19
HDAC6-232ENST00000489053 GLRA1P23415 457 aa7.6□□□□□ -1.19
HDAC6-232ENST00000489053 ACKR3P25106 362 aa7.6□□□□□ -1.19
HDAC6-232ENST00000489053 EPHA2P29317 976 aa7.6□□□□□ -1.19
HDAC6-232ENST00000489053 PSMB10P40306 273 aa7.6□□□□□ -1.19
HDAC6-232ENST00000489053 GABRA2P47869 451 aa7.6□□□□□ -1.19
HDAC6-232ENST00000489053 ACTC1P68032 377 aa7.6□□□□□ -1.19
HDAC6-232ENST00000489053 ACTA1P68133 377 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms