RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 ANGPTL6Q8NI99 470 aa13.03□□□□□ -0.32
DDX56-210ENST00000479440 DDOQ99489 341 aa13.03□□□□□ -0.32
DDX56-210ENST00000479440 IFT27Q9BW83 186 aa13.03□□□□□ -0.32
DDX56-210ENST00000479440 WNT10AQ9GZT5 417 aa13.03□□□□□ -0.32
DDX56-210ENST00000479440 HEXA-AS1Q9H8Q6 139 aa13.03□□□□□ -0.32
DDX56-210ENST00000479440 ABCB9Q9NP78 766 aa13.03□□□□□ -0.32
DDX56-210ENST00000479440 ABCB10Q9NRK6 738 aa13.03□□□□□ -0.32
DDX56-210ENST00000479440 NLKQ9UBE8 527 aa13.03□□□□□ -0.32
DDX56-210ENST00000479440 TCF19Q9Y242 345 aa13.03□□□□□ -0.32
DDX56-210ENST00000479440 WI2-2373I1.2A0A1W2PRP0 233 aa13.02□□□□□ -0.33
DDX56-210ENST00000479440 A0A1W2PRX2 142 aa13.02□□□□□ -0.33
DDX56-210ENST00000479440 OR6C68A6NDL8 312 aa13.02□□□□□ -0.33
DDX56-210ENST00000479440 TMEM210A6NLX4 147 aa13.02□□□□□ -0.33
DDX56-210ENST00000479440 VGLL3A8MV65 326 aa13.02□□□□□ -0.33
DDX56-210ENST00000479440 GSTA4O15217 222 aa13.02□□□□□ -0.33
DDX56-210ENST00000479440 ACAA1P09110 424 aaPredicted RBP13.02□□□□□ -0.33
DDX56-210ENST00000479440 PAX6P26367 422 aa13.02□□□□□ -0.33
DDX56-210ENST00000479440 MSX2P35548 267 aaPredicted RBP13.02□□□□□ -0.33
DDX56-210ENST00000479440 VDAC2P45880 294 aaPredicted RBP13.02□□□□□ -0.33
DDX56-210ENST00000479440 FAM3AP98173 230 aa13.02□□□□□ -0.33
DDX56-210ENST00000479440 MKXQ8IYA7 352 aa13.02□□□□□ -0.33
DDX56-210ENST00000479440 CSNK2A3Q8NEV1 391 aa13.02□□□□□ -0.33
DDX56-210ENST00000479440 TMEM185AQ8NFB2 350 aa13.02□□□□□ -0.33
DDX56-210ENST00000479440 OR5K1Q8NHB7 308 aa13.02□□□□□ -0.33
DDX56-210ENST00000479440 PIFOQ8TCI5 191 aa13.02□□□□□ -0.33
DDX56-210ENST00000479440 DPF1Q92782 380 aa13.02□□□□□ -0.33
DDX56-210ENST00000479440 SLAMF6Q96DU3 332 aa13.02□□□□□ -0.33
DDX56-210ENST00000479440 REEP6Q96HR9 211 aa13.02□□□□□ -0.33
DDX56-210ENST00000479440 GPR61Q9BZJ8 451 aa13.02□□□□□ -0.33
DDX56-210ENST00000479440 WDR13Q9H1Z4 485 aa13.02□□□□□ -0.33
DDX56-210ENST00000479440 SP140LQ9H930 580 aa13.02□□□□□ -0.33
DDX56-210ENST00000479440 ELL3Q9HB65 397 aaPredicted RBP13.02□□□□□ -0.33
DDX56-210ENST00000479440 CENPMQ9NSP4 180 aa13.02□□□□□ -0.33
DDX56-210ENST00000479440 TRBV4-1A0A0J9YWV2 114 aa13.01□□□□□ -0.33
DDX56-210ENST00000479440 hCG_38984A0A1B0GV85 526 aa13.01□□□□□ -0.33
DDX56-210ENST00000479440 hCG_1809904A0A1W2PP81 198 aa13.01□□□□□ -0.33
DDX56-210ENST00000479440 A0A1W2PPE2 198 aa13.01□□□□□ -0.33
DDX56-210ENST00000479440 A0A1W2PR64 198 aa13.01□□□□□ -0.33
DDX56-210ENST00000479440 A0A1W2PRV1 198 aa13.01□□□□□ -0.33
DDX56-210ENST00000479440 MEGF11A6BM72 1044 aa13.01□□□□□ -0.33
DDX56-210ENST00000479440 IDH3BO43837 385 aa13.01□□□□□ -0.33
DDX56-210ENST00000479440 CLIC3O95833 236 aa13.01□□□□□ -0.33
DDX56-210ENST00000479440 ANXA2P07355 339 aaKnown RBP13.01□□□□□ -0.33
DDX56-210ENST00000479440 RHCEP18577 417 aa13.01□□□□□ -0.33
DDX56-210ENST00000479440 GABRA2P47869 451 aa13.01□□□□□ -0.33
DDX56-210ENST00000479440 GRB2P62993 217 aaKnown RBP13.01□□□□□ -0.33
DDX56-210ENST00000479440 RPS4Y2Q8TD47 263 aa13.01□□□□□ -0.33
DDX56-210ENST00000479440 FOXRED1Q96CU9 486 aaPredicted RBP13.01□□□□□ -0.33
DDX56-210ENST00000479440 OR5M11Q96RB7 305 aa13.01□□□□□ -0.33
DDX56-210ENST00000479440 INTS9Q9NV88 658 aaKnown RBP13.01□□□□□ -0.33
DDX56-210ENST00000479440 LRP12Q9Y561 859 aa13.01□□□□□ -0.33
DDX56-210ENST00000479440 COMMD3-BMI1R4GMX3 469 aa13.01□□□□□ -0.33
DDX56-210ENST00000479440 DNAH9Q9NYC9 4486 aa13□□□□□ -0.33
DDX56-210ENST00000479440 TVP23AA6NH52 213 aa13□□□□□ -0.33
DDX56-210ENST00000479440 OR2AT4A6NND4 320 aa13□□□□□ -0.33
DDX56-210ENST00000479440 AKR7A2O43488 359 aa13□□□□□ -0.33
DDX56-210ENST00000479440 TFF1P04155 84 aa13□□□□□ -0.33
DDX56-210ENST00000479440 SPARCP09486 303 aa13□□□□□ -0.33
DDX56-210ENST00000479440 HSD11B1P28845 292 aa13□□□□□ -0.33
DDX56-210ENST00000479440 PYCR1P32322 319 aa13□□□□□ -0.33
DDX56-210ENST00000479440 SLC15A1P46059 708 aa13□□□□□ -0.33
DDX56-210ENST00000479440 CX3CR1P49238 355 aa13□□□□□ -0.33
DDX56-210ENST00000479440 KHDRBS1Q07666 443 aaKnown RBP eCLIP13□□□□□ -0.33
DDX56-210ENST00000479440 KRT72Q14CN4 511 aa13□□□□□ -0.33
DDX56-210ENST00000479440 SEC23BQ15437 767 aa13□□□□□ -0.33
DDX56-210ENST00000479440 KCTD8Q6ZWB6 473 aa13□□□□□ -0.33
DDX56-210ENST00000479440 OR2T4Q8NH00 348 aa13□□□□□ -0.33
DDX56-210ENST00000479440 RPL3LQ92901 407 aaKnown RBP13□□□□□ -0.33
DDX56-210ENST00000479440 FAM162AQ96A26 154 aa13□□□□□ -0.33
DDX56-210ENST00000479440 MPC1Q9Y5U8 109 aa13□□□□□ -0.33
DDX56-210ENST00000479440 NOTCH3Q9UM47 2321 aa12.99□□□□□ -0.33
DDX56-210ENST00000479440 EDF1O60869 148 aaKnown RBP12.99□□□□□ -0.33
DDX56-210ENST00000479440 APOC1P02654 83 aa12.99□□□□□ -0.33
DDX56-210ENST00000479440 GLRA1P23415 457 aa12.99□□□□□ -0.33
DDX56-210ENST00000479440 COX7A1P24310 79 aa12.99□□□□□ -0.33
DDX56-210ENST00000479440 GSK3AP49840 483 aa12.99□□□□□ -0.33
DDX56-210ENST00000479440 ENTPD1P49961 510 aa12.99□□□□□ -0.33
DDX56-210ENST00000479440 CAPZA1P52907 286 aa12.99□□□□□ -0.33
DDX56-210ENST00000479440 KRTAP10-11P60412 298 aa12.99□□□□□ -0.33
DDX56-210ENST00000479440 LIPEQ05469 1076 aa12.99□□□□□ -0.33
DDX56-210ENST00000479440 EGFEM1PQ0D2K5 195 aa12.99□□□□□ -0.33
DDX56-210ENST00000479440 KLF10Q13118 480 aa12.99□□□□□ -0.33
DDX56-210ENST00000479440 GFOD2Q3B7J2 385 aa12.99□□□□□ -0.33
DDX56-210ENST00000479440 PLA1AQ53H76 456 aa12.99□□□□□ -0.33
DDX56-210ENST00000479440 TMEM219Q86XT9 240 aa12.99□□□□□ -0.33
DDX56-210ENST00000479440 OR52H1Q8NGJ2 320 aa12.99□□□□□ -0.33
DDX56-210ENST00000479440 OR52J3Q8NH60 311 aa12.99□□□□□ -0.33
DDX56-210ENST00000479440 DHRS1Q96LJ7 313 aa12.99□□□□□ -0.33
DDX56-210ENST00000479440 CMTM6Q9NX76 183 aa12.99□□□□□ -0.33
DDX56-210ENST00000479440 USE1Q9NZ43 259 aa12.99□□□□□ -0.33
DDX56-210ENST00000479440 NDUFAF4Q9P032 175 aa12.99□□□□□ -0.33
DDX56-210ENST00000479440 RHBDD3Q9Y3P4 386 aa12.99□□□□□ -0.33
DDX56-210ENST00000479440 A6NDX4 124 aa12.98□□□□□ -0.33
DDX56-210ENST00000479440 F2RL2O00254 374 aa12.98□□□□□ -0.33
DDX56-210ENST00000479440 PSKH1P11801 424 aa12.98□□□□□ -0.33
DDX56-210ENST00000479440 ERVFRD-1P60508 538 aa12.98□□□□□ -0.33
DDX56-210ENST00000479440 CD83Q01151 205 aa12.98□□□□□ -0.33
DDX56-210ENST00000479440 PRDX4Q13162 271 aa12.98□□□□□ -0.33
DDX56-210ENST00000479440 SLC35F1Q5T1Q4 408 aa12.98□□□□□ -0.33
DDX56-210ENST00000479440 FAM86B1Q8N7N1 296 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms