RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 ZNF517Q6ZMY9 492 aaPredicted RBP5.31□□□□□ -1.56
SMARCE1-208ENST00000474246 Q6ZSR3 168 aa5.31□□□□□ -1.56
SMARCE1-208ENST00000474246 LANCL3Q6ZV70 420 aa5.31□□□□□ -1.56
SMARCE1-208ENST00000474246 IRF2BP2Q7Z5L9 587 aa5.31□□□□□ -1.56
SMARCE1-208ENST00000474246 LYG1Q8N1E2 194 aa5.31□□□□□ -1.56
SMARCE1-208ENST00000474246 PARP16Q8N5Y8 322 aa5.31□□□□□ -1.56
SMARCE1-208ENST00000474246 SLC30A7Q8NEW0 376 aa5.31□□□□□ -1.56
SMARCE1-208ENST00000474246 VN1R2Q8NFZ6 395 aa5.31□□□□□ -1.56
SMARCE1-208ENST00000474246 OR4D11Q8NGI4 311 aa5.31□□□□□ -1.56
SMARCE1-208ENST00000474246 OR10G9Q8NGN4 311 aa5.31□□□□□ -1.56
SMARCE1-208ENST00000474246 OR13C6PQ8NH95 151 aa5.31□□□□□ -1.56
SMARCE1-208ENST00000474246 TAAR8Q969N4 342 aa5.31□□□□□ -1.56
SMARCE1-208ENST00000474246 GALMQ96C23 342 aa5.31□□□□□ -1.56
SMARCE1-208ENST00000474246 PIK3IP1Q96FE7 263 aa5.31□□□□□ -1.56
SMARCE1-208ENST00000474246 SNHG12Q9BXW3 62 aa5.31□□□□□ -1.56
SMARCE1-208ENST00000474246 RNF26Q9BY78 433 aaPredicted RBP5.31□□□□□ -1.56
SMARCE1-208ENST00000474246 SEMA6AQ9H2E6 1030 aa5.31□□□□□ -1.56
SMARCE1-208ENST00000474246 SPHK2Q9NRA0 654 aa5.31□□□□□ -1.56
SMARCE1-208ENST00000474246 C1RLQ9NZP8 487 aa5.31□□□□□ -1.56
SMARCE1-208ENST00000474246 OR1A1Q9P1Q5 309 aa5.31□□□□□ -1.56
SMARCE1-208ENST00000474246 TMED7Q9Y3B3 224 aa5.31□□□□□ -1.56
SMARCE1-208ENST00000474246 TAF6LQ9Y6J9 622 aa5.31□□□□□ -1.56
SMARCE1-208ENST00000474246 MEIKINA0A087WXM9 373 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 A0A0A6YYD5 115 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 C17orf105B2RV13 164 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 H3BTX0 84 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 XRCC3O43542 346 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 ZNF205O95201 554 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 IFNA7P01567 189 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 NGFRP08138 427 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 LIMS3P0CW19 117 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 LIMS4P0CW20 117 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 SMIM18P0DKX4 95 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 EPCAMP16422 314 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 TAC1P20366 129 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 HPCAL1P37235 193 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 GSK3BP49841 420 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 FOXG1P55316 489 aaPredicted RBP5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 DLX6P56179 175 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 SNRPEP62304 92 aaKnown RBP5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 IL10RBQ08334 325 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 SCN5AQ14524 2016 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 EXOSC7Q15024 291 aaKnown RBP5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 UPP1Q16831 310 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 SCGB2B2Q4G0G5 96 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 OR10J3Q5JRS4 329 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 NAPRTQ6XQN6 538 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 SNX29P2Q8IUI4 249 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 ZNF547Q8IVP9 402 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 OR5K1Q8NHB7 308 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 SLC7A13Q8TCU3 470 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 SMAP2Q8WU79 429 aaPredicted RBP5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 PCNPQ8WW12 178 aaKnown RBP5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 OR8D1Q8WZ84 308 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 CNBD2Q96M20 576 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 PNKPQ96T60 521 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 C20orf144Q9BQM9 153 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 RSPO3Q9BXY4 272 aaPredicted RBP5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 CIPCQ9C0C6 399 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 ACTR3CQ9C0K3 210 aaPredicted RBP5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 MAP1LC3AQ9H492 121 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 CXorf36Q9H7Y0 433 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 TMEM74BQ9NUR3 256 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 C1orf123Q9NWV4 160 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 IL17CQ9P0M4 197 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 A3GALT2U3KPV4 340 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 NOTCH1P46531 2555 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 MYO16Q9Y6X6 1858 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 MYH11P35749 1972 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 USP27XA6NNY8 438 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 ATG12O94817 140 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 VTNP04004 478 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 MPC1LP0DKB6 136 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 CLDN6P56747 220 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 ABCE1P61221 599 aaKnown RBP5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 OC90Q02509 493 aaPredicted RBP5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 PLA2G7Q13093 441 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 MELKQ14680 651 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 SLC10A1Q14973 349 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 DUOXA1Q1HG43 343 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 TRMT5Q32P41 509 aaKnown RBP5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 TMEM78Q5T7P6 136 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 GLYATQ6IB77 296 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 WDR74Q6RFH5 385 aaPredicted RBP5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 CCDC190Q86UF4 302 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 ZNF439Q8NDP4 499 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 NFAM1Q8NET5 270 aaPredicted RBP5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 GPR32P1Q8NGA4 272 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 OR6K6Q8NGW6 343 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 RPLP0P6Q8NHW5 317 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 PLPPR1Q8TBJ4 325 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 LRRC15Q8TF66 581 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 ASB13Q8WXK3 278 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 ART4Q93070 314 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 IL22RA2Q969J5 263 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 SDSLQ96GA7 329 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 ATP5SQ99766 215 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 VN1R1Q9GZP7 353 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 CST9LQ9H4G1 147 aa5.3□□□□□ -1.56
SMARCE1-208ENST00000474246 SLC7A10Q9NS82 523 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms