RNA–Protein interactions for RNA: ENST00000448833.5

VPS41-208, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 1 (best)

Gene VPS41, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-208ENST00000448833 LDLRAD3Q86YD5 345 aa5.85□□□□□ -1.47
VPS41-208ENST00000448833 LY6G5BQ8NDX9 201 aa5.85□□□□□ -1.47
VPS41-208ENST00000448833 C19orf18Q8NEA5 215 aa5.85□□□□□ -1.47
VPS41-208ENST00000448833 OR10G2Q8NGC3 310 aa5.85□□□□□ -1.47
VPS41-208ENST00000448833 OR8D4Q8NGM9 314 aa5.85□□□□□ -1.47
VPS41-208ENST00000448833 OR4Q3Q8NH05 313 aa5.85□□□□□ -1.47
VPS41-208ENST00000448833 OR5R1Q8NH85 324 aa5.85□□□□□ -1.47
VPS41-208ENST00000448833 OTOSQ8NHW6 89 aa5.85□□□□□ -1.47
VPS41-208ENST00000448833 ZNF671Q8TAW3 534 aa5.85□□□□□ -1.47
VPS41-208ENST00000448833 THEM6Q8WUY1 208 aa5.85□□□□□ -1.47
VPS41-208ENST00000448833 ZNRF4Q8WWF5 429 aa5.85□□□□□ -1.47
VPS41-208ENST00000448833 DNAJC9Q8WXX5 260 aa5.85□□□□□ -1.47
VPS41-208ENST00000448833 PAPOLGQ9BWT3 736 aaKnown RBP5.85□□□□□ -1.47
VPS41-208ENST00000448833 PRRG3Q9BZD7 231 aa5.85□□□□□ -1.47
VPS41-208ENST00000448833 FAM234AQ9H0X4 552 aa5.85□□□□□ -1.47
VPS41-208ENST00000448833 TLNRD1Q9H1K6 362 aa5.85□□□□□ -1.47
VPS41-208ENST00000448833 ARMC1Q9NVT9 282 aa5.85□□□□□ -1.47
VPS41-208ENST00000448833 RASL12Q9NYN1 266 aa5.85□□□□□ -1.47
VPS41-208ENST00000448833 HAO2Q9NYQ3 351 aa5.85□□□□□ -1.47
VPS41-208ENST00000448833 CTSZQ9UBR2 303 aa5.85□□□□□ -1.47
VPS41-208ENST00000448833 MGAM2Q2M2H8 2515 aa5.85□□□□□ -1.47
VPS41-208ENST00000448833 MEGF8Q7Z7M0 2845 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 A0A0U1RQV5 110 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 hCG_38984A0A1B0GV85 526 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 TCRBV5S2A0A599 114 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 AQP12BA6NM10 295 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 CDIPTO14735 213 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 GSC2O15499 205 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 E2F6O75461 281 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 MTRF1O75570 445 aaKnown RBP5.84□□□□□ -1.47
VPS41-208ENST00000448833 PAHP00439 452 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 OSMP13725 252 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 ATP6V1B2P21281 511 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 OMGP23515 440 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 POU1F1P28069 291 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 DCTDP32321 178 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 TGFBR2P37173 567 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 RBMXP38159 391 aaKnown RBP5.84□□□□□ -1.47
VPS41-208ENST00000448833 TGM4P49221 684 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 CAV3P56539 151 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 PSMA6P60900 246 aaKnown RBP5.84□□□□□ -1.47
VPS41-208ENST00000448833 GNG3P63215 75 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 HNRNPA0Q13151 305 aaKnown RBP5.84□□□□□ -1.47
VPS41-208ENST00000448833 GFOD2Q3B7J2 385 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 WDR38Q5JTN6 314 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 ZBTB37Q5TC79 503 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 LINC01590Q5TEZ4 76 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 C11orf88Q6PI97 169 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 ZNF826PQ6ZT77 177 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 KCTD8Q6ZWB6 473 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 PRSS45Q7RTY3 260 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 VMO1Q7Z5L0 202 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 THAP5Q7Z6K1 395 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 KRT77Q7Z794 578 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 AQP12AQ8IXF9 295 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 C11orf53Q8IXP5 236 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 ZDHHC23Q8IYP9 409 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 CCDC197Q8NCU1 140 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 OR5A2Q8NGI9 324 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 OR5D13Q8NGL4 314 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 C8orf46Q8TAG6 207 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 FAM81AQ8TBF8 368 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 WFDC12Q8WWY7 111 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 ASB17Q8WXJ9 295 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 OR5P3Q8WZ94 311 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 RNF170Q96K19 258 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 CCT8L2Q96SF2 557 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 TBX15Q96SF7 602 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 CCL13Q99616 98 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 CITED1Q99966 193 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 CHID1Q9BWS9 393 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 MROQ9BYG7 248 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 CHIAQ9BZP6 476 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 YIPF3Q9GZM5 350 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 OR51V1Q9H2C8 321 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 RASSF4Q9H2L5 321 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 METTL8Q9H825 291 aaKnown RBP5.84□□□□□ -1.47
VPS41-208ENST00000448833 SMURF1Q9HCE7 757 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 BRD7Q9NPI1 651 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 C1RLQ9NZP8 487 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 DNAJC27Q9NZQ0 273 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 ONECUT1Q9UBC0 465 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 LAMP5Q9UJQ1 280 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 RHBDD3Q9Y3P4 386 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 RNF114Q9Y508 228 aa5.84□□□□□ -1.47
VPS41-208ENST00000448833 IGHV3OR15-7A0A075B7D8 119 aa5.83□□□□□ -1.48
VPS41-208ENST00000448833 TRBV23-1A0A0A0MS06 115 aa5.83□□□□□ -1.48
VPS41-208ENST00000448833 ZNF816-ZNF321PA0A0X1KG74 233 aa5.83□□□□□ -1.48
VPS41-208ENST00000448833 MDFIC2A0A1B0GVS7 189 aa5.83□□□□□ -1.48
VPS41-208ENST00000448833 TMEM269A0A1B0GVZ9 245 aa5.83□□□□□ -1.48
VPS41-208ENST00000448833 OR5B21A6NL26 309 aa5.83□□□□□ -1.48
VPS41-208ENST00000448833 FAM183AA6NL82 134 aa5.83□□□□□ -1.48
VPS41-208ENST00000448833 OR2AT4A6NND4 320 aa5.83□□□□□ -1.48
VPS41-208ENST00000448833 ZNF850A8MQ14 1090 aa5.83□□□□□ -1.48
VPS41-208ENST00000448833 H3BUI4 141 aa5.83□□□□□ -1.48
VPS41-208ENST00000448833 M0R1W7 72 aa5.83□□□□□ -1.48
VPS41-208ENST00000448833 NPFFO15130 113 aa5.83□□□□□ -1.48
VPS41-208ENST00000448833 WIPF1O43516 503 aa5.83□□□□□ -1.48
VPS41-208ENST00000448833 GPR137BO60478 399 aa5.83□□□□□ -1.48
VPS41-208ENST00000448833 CLPXO76031 633 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms