RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 RGS21Q2M5E4 152 aa3.73□□□□□ -1.81
SDCBP-205ENST00000447267 FAM76BQ5HYJ3 339 aa3.73□□□□□ -1.81
SDCBP-205ENST00000447267 CDC73Q6P1J9 531 aa3.73□□□□□ -1.81
SDCBP-205ENST00000447267 DHRS4L2Q6PKH6 230 aa3.73□□□□□ -1.81
SDCBP-205ENST00000447267 ARL9Q6T311 187 aa3.73□□□□□ -1.81
SDCBP-205ENST00000447267 LINC00322Q6ZN03 302 aaPredicted RBP3.73□□□□□ -1.81
SDCBP-205ENST00000447267 TMEM123Q8N131 208 aa3.73□□□□□ -1.81
SDCBP-205ENST00000447267 C1orf52Q8N6N3 182 aaKnown RBP3.73□□□□□ -1.81
SDCBP-205ENST00000447267 CDRT4Q8N9R6 151 aa3.73□□□□□ -1.81
SDCBP-205ENST00000447267 ATG16L2Q8NAA4 619 aa3.73□□□□□ -1.81
SDCBP-205ENST00000447267 CCDC197Q8NCU1 140 aa3.73□□□□□ -1.81
SDCBP-205ENST00000447267 FAM156AQ8NDB6 213 aa3.73□□□□□ -1.81
SDCBP-205ENST00000447267 LY6G5BQ8NDX9 201 aa3.73□□□□□ -1.81
SDCBP-205ENST00000447267 VANGL1Q8TAA9 524 aaPredicted RBP3.73□□□□□ -1.81
SDCBP-205ENST00000447267 TMEM234Q8WY98 164 aa3.73□□□□□ -1.81
SDCBP-205ENST00000447267 HDAC2Q92769 488 aaKnown RBP3.73□□□□□ -1.81
SDCBP-205ENST00000447267 DGCR14Q96DF8 476 aaKnown RBP3.73□□□□□ -1.81
SDCBP-205ENST00000447267 PPP1R36Q96LQ0 422 aa3.73□□□□□ -1.81
SDCBP-205ENST00000447267 C17orf77Q96MU5 243 aa3.73□□□□□ -1.81
SDCBP-205ENST00000447267 TMEM237Q96Q45 408 aa3.73□□□□□ -1.81
SDCBP-205ENST00000447267 CHP1Q99653 195 aa3.73□□□□□ -1.81
SDCBP-205ENST00000447267 OVOL2Q9BRP0 275 aa3.73□□□□□ -1.81
SDCBP-205ENST00000447267 NUP62CLQ9H1M0 184 aa3.73□□□□□ -1.81
SDCBP-205ENST00000447267 GIMAP4Q9NUV9 329 aa3.73□□□□□ -1.81
SDCBP-205ENST00000447267 TBC1D23Q9NUY8 699 aa3.73□□□□□ -1.81
SDCBP-205ENST00000447267 AHSPQ9NZD4 102 aa3.73□□□□□ -1.81
SDCBP-205ENST00000447267 NUDT4Q9NZJ9 180 aa3.73□□□□□ -1.81
SDCBP-205ENST00000447267 RPS6KA6Q9UK32 745 aa3.73□□□□□ -1.81
SDCBP-205ENST00000447267 POFUT2Q9Y2G5 429 aa3.73□□□□□ -1.81
SDCBP-205ENST00000447267 PSAT1Q9Y617 370 aa3.73□□□□□ -1.81
SDCBP-205ENST00000447267 TNCP24821 2201 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 PKHD1L1Q86WI1 4243 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 FAM172BPA6NC97 362 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 IGLL5B9A064 214 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 G3V2L1 256 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 H0YJX3 145 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 H3BNH8 94 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 TOR1AO14656 332 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 ANKRD28O15084 1053 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 NOS1APO75052 506 aaPredicted RBP3.72□□□□□ -1.81
SDCBP-205ENST00000447267 PEX11AO75192 247 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 PTP4A3O75365 173 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 UBL3O95164 117 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 HSPA4LO95757 839 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 GYPAP02724 150 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 SERPINE1P05121 402 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 PRPS2P11908 318 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 MLNP12872 115 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 VHLP40337 213 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 ATP12AP54707 1039 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 HSF2Q03933 536 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 PSG7Q13046 419 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 LGALS9BQ3B8N2 356 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 VPS26BQ4G0F5 336 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 WDR73Q6P4I2 378 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 ERICH5Q6P6B1 374 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 EMBQ6PCB8 327 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 UTS2BQ765I0 119 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 GRINAQ7Z429 371 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 GOLGA7Q7Z5G4 137 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 LYG2Q86SG7 212 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 ZC3HC1Q86WB0 502 aaKnown RBP3.72□□□□□ -1.81
SDCBP-205ENST00000447267 CENPSQ8N2Z9 138 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 MMGT1Q8N4V1 131 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 FAM71E2Q8N5Q1 922 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 ARFGAP2Q8N6H7 521 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 COX18Q8N8Q8 333 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 PCYOX1LQ8NBM8 494 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 FAM71CQ8NEG0 241 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 OR11H1Q8NG94 326 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 OR10AD1Q8NGE0 317 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 OR56B2PQ8NGI1 322 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 SLC26A7Q8TE54 656 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 CHPT1Q8WUD6 406 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 DCUN1D4Q92564 292 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 CDS1Q92903 461 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 TRIM63Q969Q1 353 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 CHMP6Q96FZ7 201 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 APIPQ96GX9 242 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 TXNDC15Q96J42 360 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 RAB3IPQ96QF0 476 aaPredicted RBP3.72□□□□□ -1.81
SDCBP-205ENST00000447267 OR2M2Q96R28 347 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 SEC22CQ9BRL7 303 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 WDR12Q9GZL7 423 aaKnown RBP3.72□□□□□ -1.81
SDCBP-205ENST00000447267 C6orf62Q9GZU0 229 aaPredicted RBP3.72□□□□□ -1.81
SDCBP-205ENST00000447267 HOXD1Q9GZZ0 328 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 ARMC7Q9H6L4 198 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 SPACA1Q9HBV2 294 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 DIABLOQ9NR28 239 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 ABCB10Q9NRK6 738 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 NMRK1Q9NWW6 199 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 MSRB1Q9NZV6 116 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 STEAP1Q9UHE8 339 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 FBXL3Q9UKT7 428 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 STK38LQ9Y2H1 464 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 GMPPBQ9Y5P6 360 aa3.72□□□□□ -1.81
SDCBP-205ENST00000447267 LRP1Q07954 4544 aaKnown RBP3.72□□□□□ -1.81
SDCBP-205ENST00000447267 TMED7-TICAM2A0A0A6YYA0 188 aa3.71□□□□□ -1.82
SDCBP-205ENST00000447267 FAM90A8PA6NJQ4 464 aa3.71□□□□□ -1.82
SDCBP-205ENST00000447267 LINC00587B1AMM8 73 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms