RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-208	ENST00000436638	LPAR2	Q9HBW0	351 aa		5.4	□□□□□ -1.54
ECHDC1-208	ENST00000436638	ASB6	Q9NWX5	421 aa		5.4	□□□□□ -1.54
ECHDC1-208	ENST00000436638	ELOVL5	Q9NYP7	299 aa		5.4	□□□□□ -1.54
ECHDC1-208	ENST00000436638	GLTP	Q9NZD2	209 aa		5.4	□□□□□ -1.54
ECHDC1-208	ENST00000436638	CCDC59	Q9P031	241 aa	Known RBP	5.4	□□□□□ -1.54
ECHDC1-208	ENST00000436638	MLX	Q9UH92	298 aa		5.4	□□□□□ -1.54
ECHDC1-208	ENST00000436638	GLS2	Q9UI32	602 aa		5.4	□□□□□ -1.54
ECHDC1-208	ENST00000436638	PRSS50	Q9UI38	385 aa		5.4	□□□□□ -1.54
ECHDC1-208	ENST00000436638	ING1	Q9UK53	422 aa	Predicted RBP	5.4	□□□□□ -1.54
ECHDC1-208	ENST00000436638	DMXL2	Q8TDJ6	3036 aa		5.4	□□□□□ -1.55
ECHDC1-208	ENST00000436638	MED12	Q93074	2177 aa		5.4	□□□□□ -1.55
ECHDC1-208	ENST00000436638	ESPL1	Q14674	2120 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638		A0A1B0GW15	77 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	NKX2-6	A6NCS4	301 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	RIIAD1	A6NNX1	92 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	EI24	O14681	340 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	PRKY	O43930	277 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	SSX4	O60224	188 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	UPK3A	O75631	287 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	KDM4B	O94953	1096 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	IFNA10	P01566	189 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	TSPAN19	P0C672	248 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	PSKH1	P11801	424 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	PAICS	P22234	425 aa	Known RBP	5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	SDHA	P31040	664 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	DAP	P51397	102 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	ZNF84	P51523	738 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	AKR1D1	P51857	326 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	CRISP1	P54107	249 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	RPS7	P62081	194 aa	Known RBP	5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	MYBPC1	Q00872	1141 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	TGFBR3	Q03167	851 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	SLC34A1	Q06495	639 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	KRR1	Q13601	381 aa	Known RBP	5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	TMEM177	Q53S58	311 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	ESCO2	Q56NI9	601 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	TSPO2	Q5TGU0	170 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	SLC27A4	Q6P1M0	643 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	FAHD1	Q6P587	224 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	DNM1P34	Q6PK57	102 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	C20orf196	Q8IYI0	205 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	PARP8	Q8N3A8	854 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	CBR4	Q8N4T8	237 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	ARIH2OS	Q8N7S6	290 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	ZIC4	Q8N9L1	334 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	CYB561A3	Q8NBI2	242 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	CCDC54	Q8NEL0	328 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	NOXO1	Q8NFA2	376 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	OR4D6	Q8NGJ1	314 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	OR52E2	Q8NGJ4	325 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	RNASE8	Q8TDE3	154 aa	Known RBP	5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	RNASE6	Q93091	150 aa	Known RBP	5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	OTULIN	Q96BN8	352 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	FOXRED1	Q96CU9	486 aa	Predicted RBP	5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	MARS2	Q96GW9	593 aa	Known RBP	5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	LRR1	Q96L50	414 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	SNX22	Q96L94	193 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638		Q96M85	177 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	ALKBH3	Q96Q83	286 aa	Predicted RBP	5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	SLC38A2	Q96QD8	506 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	TSPAN32	Q96QS1	320 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	OR2M2	Q96R28	347 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	GPX7	Q96SL4	187 aa	Predicted RBP	5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	PFDN5	Q99471	154 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	SOX7	Q9BT81	388 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	MND1	Q9BWT6	205 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	HDHD5	Q9BXW7	423 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	RERGL	Q9H628	205 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	SLA2	Q9H6Q3	261 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	SLC7A10	Q9NS82	523 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	MTCH1	Q9NZJ7	389 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	NDRG3	Q9UGV2	375 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	KLHL21	Q9UJP4	597 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	COPS3	Q9UNS2	423 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	UBE2J1	Q9Y385	318 aa	Predicted RBP	5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	ADAM18	Q9Y3Q7	739 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	ALG5	Q9Y673	324 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	PHF3	Q92576	2039 aa	Known RBP	5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	CELSR3	Q9NYQ7	3312 aa		5.39	□□□□□ -1.55
ECHDC1-208	ENST00000436638	ARHGAP21	Q5T5U3	1957 aa		5.38	□□□□□ -1.55
ECHDC1-208	ENST00000436638	FABP12	A6NFH5	140 aa		5.38	□□□□□ -1.55
ECHDC1-208	ENST00000436638	ANKRD61	A6NGH8	418 aa		5.38	□□□□□ -1.55
ECHDC1-208	ENST00000436638	FBLL1	A6NHQ2	334 aa	Known RBP	5.38	□□□□□ -1.55
ECHDC1-208	ENST00000436638	C16orf97	H3BN30	126 aa		5.38	□□□□□ -1.55
ECHDC1-208	ENST00000436638	CASK	O14936	926 aa		5.38	□□□□□ -1.55
ECHDC1-208	ENST00000436638	ARPC3	O15145	178 aa		5.38	□□□□□ -1.55
ECHDC1-208	ENST00000436638	DHH	O43323	396 aa		5.38	□□□□□ -1.55
ECHDC1-208	ENST00000436638	KHDRBS3	O75525	346 aa	Known RBP	5.38	□□□□□ -1.55
ECHDC1-208	ENST00000436638	RAD51D	O75771	328 aa		5.38	□□□□□ -1.55
ECHDC1-208	ENST00000436638	ZNF432	O94892	652 aa		5.38	□□□□□ -1.55
ECHDC1-208	ENST00000436638	FARS2	O95363	451 aa	Known RBP	5.38	□□□□□ -1.55
ECHDC1-208	ENST00000436638	OR2C1	O95371	312 aa		5.38	□□□□□ -1.55
ECHDC1-208	ENST00000436638	TXNDC12	O95881	172 aa		5.38	□□□□□ -1.55
ECHDC1-208	ENST00000436638	CGA	P01215	116 aa		5.38	□□□□□ -1.55
ECHDC1-208	ENST00000436638	IGHV2-70	P01814	119 aa		5.38	□□□□□ -1.55
ECHDC1-208	ENST00000436638	HEXA	P06865	529 aa		5.38	□□□□□ -1.55
ECHDC1-208	ENST00000436638	HIST1H1C	P16403	213 aa	Known RBP	5.38	□□□□□ -1.55
ECHDC1-208	ENST00000436638	IGHV1-2	P23083	117 aa		5.38	□□□□□ -1.55
ECHDC1-208	ENST00000436638	MPG	P29372	298 aa		5.38	□□□□□ -1.55
ECHDC1-208	ENST00000436638	OTX1	P32242	354 aa	Predicted RBP	5.38	□□□□□ -1.55

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