RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 KDF1Q8NAX2 398 aaPredicted RBP4.74□□□□□ -1.65
VPS41-203ENST00000395969 ST7LQ8TDW4 575 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 ISOC2Q96AB3 205 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 KTI12Q96EK9 354 aaPredicted RBP4.74□□□□□ -1.65
VPS41-203ENST00000395969 PIK3IP1Q96FE7 263 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 THOC3Q96J01 351 aaKnown RBP4.74□□□□□ -1.65
VPS41-203ENST00000395969 TMEM68Q96MH6 324 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 OXGR1Q96P68 337 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 LMF1Q96S06 567 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 CHST6Q9GZX3 395 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 CNTD2Q9H8S5 307 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.74□□□□□ -1.65
VPS41-203ENST00000395969 PNO1Q9NRX1 252 aaKnown RBP4.74□□□□□ -1.65
VPS41-203ENST00000395969 TAS2R8Q9NYW2 309 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 B9D1Q9UPM9 204 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 HEATR5AQ86XA9 2040 aa4.74□□□□□ -1.65
VPS41-203ENST00000395969 GGT3PA6NGU5 568 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 OR4C45A6NMZ5 311 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 C9J4A7 227 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 AP4M1O00189 453 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 KCNAB3O43448 404 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 PDGFBP01127 241 aaPredicted RBP4.73□□□□□ -1.65
VPS41-203ENST00000395969 MBP02144 154 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 OR4E1P0C645 316 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 PGA4P0DJD7 388 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 PGA3P0DJD8 388 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 ITGA3P26006 1051 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 DLSTP36957 453 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 F2RL1P55085 397 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 GFRA1P56159 465 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 SLC35A1P78382 337 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 PDCD1Q15116 288 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 PCGF3Q3KNV8 242 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 NSUN5P2Q63ZY6 315 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 CLEC9AQ6UXN8 241 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 LANCL3Q6ZV70 420 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 LRRTM1Q86UE6 522 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 LRP11Q86VZ4 500 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 CATSPERDQ86XM0 798 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 ZNF100Q8IYN0 542 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 TMEM123Q8N131 208 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 RNF141Q8WVD5 230 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 RNF133Q8WVZ7 376 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 PSMF1Q92530 271 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 C14orf79Q96F83 325 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 CLCC1Q96S66 551 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 NEU1Q99519 415 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 C20orf24Q9BUV8 137 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 TTTY10Q9BZA0 68 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 TIMM10BQ9Y5J6 103 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 TECTAO75443 2155 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 LNP1A1A4G5 178 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 NPIPA2E9PIF3 369 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 XRCC3O43542 346 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 TRAF3IP2O43734 574 aaPredicted RBP4.73□□□□□ -1.65
VPS41-203ENST00000395969 ZIC3O60481 467 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 CA11O75493 328 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 CBR3O75828 277 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 RBBP9O75884 186 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 RENP00797 406 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 RLN1P04808 185 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 CD5P06127 495 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 COX5BP10606 129 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 DAOP14920 347 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 HPGDP15428 266 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 PAX1P15863 534 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 MAS1LP35410 378 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 CAV2P51636 162 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 CNN3Q15417 329 aaKnown RBP4.73□□□□□ -1.65
VPS41-203ENST00000395969 NDUFAF6Q330K2 333 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 ANKRD39Q53RE8 183 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 PYY3Q5JQD4 70 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 C1orf100Q5SVJ3 147 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 DNLZQ5SXM8 178 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 ADAM5Q6NVV9 412 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 MARCH3Q86UD3 253 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 C1QL4Q86Z23 238 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 RFLNBQ8N5W9 214 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 ZNF383Q8NA42 475 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 MDS2Q8NDY4 140 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 STEAP2Q8NFT2 490 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 OR51S1Q8NGJ8 323 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 DTD1Q8TEA8 209 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 DUSP19Q8WTR2 217 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 ZNF775Q96BV0 537 aaPredicted RBP4.73□□□□□ -1.65
VPS41-203ENST00000395969 POFUT1Q9H488 388 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 PRDM13Q9H4Q3 707 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 NOX4Q9NPH5 578 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 ZNF391Q9UJN7 358 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 TCFL5Q9UL49 500 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 ZNF281Q9Y2X9 895 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 V9GY05 133 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 LOC100509620A0A075B734 347 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 TRBV11-1A0A0K0K1C0 115 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 A0A1W2PNU3 283 aaPredicted RBP4.73□□□□□ -1.65
VPS41-203ENST00000395969 C9orf172C9J069 976 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 J3QW42 95 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 SS18L1O75177 396 aaPredicted RBP4.73□□□□□ -1.65
VPS41-203ENST00000395969 YIF1AO95070 293 aa4.73□□□□□ -1.65
VPS41-203ENST00000395969 PMP2P02689 132 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms