RNA–Protein interactions for RNA: ENST00000395145.3

CLDN3-201, Transcript of claudin 3, humanhuman

APPRIS P1 BASIC

Gene CLDN3, Length 1,274 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3-201ENST00000395145 OR11L1Q8NGX0 322 aa17.15■□□□□ 0.34
CLDN3-201ENST00000395145 HPSE2Q8WWQ2 592 aa17.15■□□□□ 0.34
CLDN3-201ENST00000395145 PIGCQ92535 297 aa17.15■□□□□ 0.34
CLDN3-201ENST00000395145 RTL8AQ9BWD3 113 aa17.15■□□□□ 0.34
CLDN3-201ENST00000395145 TLNRD1Q9H1K6 362 aa17.15■□□□□ 0.34
CLDN3-201ENST00000395145 ZNF665Q9H7R5 613 aa17.15■□□□□ 0.34
CLDN3-201ENST00000395145 PLCXD1Q9NUJ7 323 aa17.15■□□□□ 0.34
CLDN3-201ENST00000395145 ENPP5Q9UJA9 477 aa17.15■□□□□ 0.34
CLDN3-201ENST00000395145 DIMT1Q9UNQ2 313 aaKnown RBP17.15■□□□□ 0.34
CLDN3-201ENST00000395145 PIGLQ9Y2B2 252 aa17.15■□□□□ 0.34
CLDN3-201ENST00000395145 A0A1B0GVI7 797 aa17.14■□□□□ 0.33
CLDN3-201ENST00000395145 ISPDA4D126 451 aa17.14■□□□□ 0.33
CLDN3-201ENST00000395145 IGHV2-5P01817 119 aa17.14■□□□□ 0.33
CLDN3-201ENST00000395145 HTR1AP08908 422 aa17.14■□□□□ 0.33
CLDN3-201ENST00000395145 PIPP12273 146 aaPredicted RBP17.14■□□□□ 0.33
CLDN3-201ENST00000395145 IRF2P14316 349 aa17.14■□□□□ 0.33
CLDN3-201ENST00000395145 FAHP16930 419 aa17.14■□□□□ 0.33
CLDN3-201ENST00000395145 ZNF16P17020 682 aaPredicted RBP17.14■□□□□ 0.33
CLDN3-201ENST00000395145 CDH15P55291 814 aa17.14■□□□□ 0.33
CLDN3-201ENST00000395145 NANOS3P60323 173 aaKnown RBP17.14■□□□□ 0.33
CLDN3-201ENST00000395145 MRPL28Q13084 256 aaKnown RBP17.14■□□□□ 0.33
CLDN3-201ENST00000395145 ZNF154Q13106 437 aa17.14■□□□□ 0.33
CLDN3-201ENST00000395145 FAM76BQ5HYJ3 339 aa17.14■□□□□ 0.33
CLDN3-201ENST00000395145 TMEM42Q69YG0 159 aa17.14■□□□□ 0.33
CLDN3-201ENST00000395145 OR1M1Q8NGA1 313 aa17.14■□□□□ 0.33
CLDN3-201ENST00000395145 HAVCR2Q8TDQ0 301 aa17.14■□□□□ 0.33
CLDN3-201ENST00000395145 RAB39BQ96DA2 213 aa17.14■□□□□ 0.33
CLDN3-201ENST00000395145 GAL3ST1Q99999 423 aa17.14■□□□□ 0.33
CLDN3-201ENST00000395145 ISG20L2Q9H9L3 353 aaKnown RBP17.14■□□□□ 0.33
CLDN3-201ENST00000395145 CNOT2Q9NZN8 540 aaKnown RBP17.14■□□□□ 0.33
CLDN3-201ENST00000395145 FRRS1LQ9P0K9 344 aa17.14■□□□□ 0.33
CLDN3-201ENST00000395145 RNF7Q9UBF6 113 aa17.14■□□□□ 0.33
CLDN3-201ENST00000395145 NIPBLQ6KC79 2804 aaeCLIP17.14■□□□□ 0.33
CLDN3-201ENST00000395145 TMEM210A6NLX4 147 aa17.13■□□□□ 0.33
CLDN3-201ENST00000395145 SYT7O43581 403 aa17.13■□□□□ 0.33
CLDN3-201ENST00000395145 ISG15P05161 165 aa17.13■□□□□ 0.33
CLDN3-201ENST00000395145 GRPP07492 148 aa17.13■□□□□ 0.33
CLDN3-201ENST00000395145 MDH2P40926 338 aaKnown RBP17.13■□□□□ 0.33
CLDN3-201ENST00000395145 ODF4Q2M2E3 257 aa17.13■□□□□ 0.33
CLDN3-201ENST00000395145 CEACAM21Q3KPI0 293 aa17.13■□□□□ 0.33
CLDN3-201ENST00000395145 TMEM244Q5VVB8 128 aa17.13■□□□□ 0.33
CLDN3-201ENST00000395145 C11orf53Q8IXP5 236 aa17.13■□□□□ 0.33
CLDN3-201ENST00000395145 MUC20Q8N307 709 aaPredicted RBP17.13■□□□□ 0.33
CLDN3-201ENST00000395145 SPICQ8N5J4 248 aa17.13■□□□□ 0.33
CLDN3-201ENST00000395145 LINC01356Q8N9X3 169 aa17.13■□□□□ 0.33
CLDN3-201ENST00000395145 GGHQ92820 318 aa17.13■□□□□ 0.33
CLDN3-201ENST00000395145 FGF23Q9GZV9 251 aaPredicted RBP17.13■□□□□ 0.33
CLDN3-201ENST00000395145 C1orf123Q9NWV4 160 aa17.13■□□□□ 0.33
CLDN3-201ENST00000395145 CAB39Q9Y376 341 aaPredicted RBP17.13■□□□□ 0.33
CLDN3-201ENST00000395145 EXOSC1Q9Y3B2 195 aaKnown RBP17.13■□□□□ 0.33
CLDN3-201ENST00000395145 LOC107986453A0A1B0GWG9 222 aa17.12■□□□□ 0.33
CLDN3-201ENST00000395145 EFCAB10A6NFE3 127 aa17.12■□□□□ 0.33
CLDN3-201ENST00000395145 A6NLC8 198 aa17.12■□□□□ 0.33
CLDN3-201ENST00000395145 B4DSR2 109 aa17.12■□□□□ 0.33
CLDN3-201ENST00000395145 FAM157AC9JC47 383 aa17.12■□□□□ 0.33
CLDN3-201ENST00000395145 THBS2P35442 1172 aa17.12■□□□□ 0.33
CLDN3-201ENST00000395145 HSPA13P48723 471 aa17.12■□□□□ 0.33
CLDN3-201ENST00000395145 ETV1P50549 477 aa17.12■□□□□ 0.33
CLDN3-201ENST00000395145 ALKBH1Q13686 389 aaKnown RBP17.12■□□□□ 0.33
CLDN3-201ENST00000395145 CLVS2Q5SYC1 327 aa17.12■□□□□ 0.33
CLDN3-201ENST00000395145 IZUMO2Q6UXV1 221 aa17.12■□□□□ 0.33
CLDN3-201ENST00000395145 C10orf35Q96D05 121 aa17.12■□□□□ 0.33
CLDN3-201ENST00000395145 TMEM80Q96HE8 168 aa17.12■□□□□ 0.33
CLDN3-201ENST00000395145 HIST1H2AAQ96QV6 131 aa17.12■□□□□ 0.33
CLDN3-201ENST00000395145 YAE1D1Q9NRH1 226 aa17.12■□□□□ 0.33
CLDN3-201ENST00000395145 PSORS1C1Q9UIG5 152 aa17.12■□□□□ 0.33
CLDN3-201ENST00000395145 ZFHX3Q15911 3703 aa17.12■□□□□ 0.33
CLDN3-201ENST00000395145 NF1P21359 2839 aa17.11■□□□□ 0.33
CLDN3-201ENST00000395145 PPIAL4EA0A075B759 164 aa17.11■□□□□ 0.33
CLDN3-201ENST00000395145 OR4C45A6NMZ5 311 aa17.11■□□□□ 0.33
CLDN3-201ENST00000395145 A8MV72 311 aaPredicted RBP17.11■□□□□ 0.33
CLDN3-201ENST00000395145 PPIAL4DF5H284 164 aa17.11■□□□□ 0.33
CLDN3-201ENST00000395145 XPNPEP2O43895 674 aa17.11■□□□□ 0.33
CLDN3-201ENST00000395145 NRASP01111 189 aa17.11■□□□□ 0.33
CLDN3-201ENST00000395145 PPIAL4FP0DN26 164 aa17.11■□□□□ 0.33
CLDN3-201ENST00000395145 ZNF12P17014 697 aa17.11■□□□□ 0.33
CLDN3-201ENST00000395145 CFHR2P36980 270 aa17.11■□□□□ 0.33
CLDN3-201ENST00000395145 TGM4P49221 684 aa17.11■□□□□ 0.33
CLDN3-201ENST00000395145 RIPPLY3P57055 190 aa17.11■□□□□ 0.33
CLDN3-201ENST00000395145 ST3GAL4Q11206 333 aa17.11■□□□□ 0.33
CLDN3-201ENST00000395145 FAM166AQ6J272 317 aa17.11■□□□□ 0.33
CLDN3-201ENST00000395145 ZNF826PQ6ZT77 177 aa17.11■□□□□ 0.33
CLDN3-201ENST00000395145 KLHL36Q8N4N3 616 aa17.11■□□□□ 0.33
CLDN3-201ENST00000395145 OR5A2Q8NGI9 324 aa17.11■□□□□ 0.33
CLDN3-201ENST00000395145 RNF170Q96K19 258 aa17.11■□□□□ 0.33
CLDN3-201ENST00000395145 ANKRD60Q9BZ19 345 aa17.11■□□□□ 0.33
CLDN3-201ENST00000395145 PATZ1Q9HBE1 687 aaKnown RBP17.11■□□□□ 0.33
CLDN3-201ENST00000395145 TMEM165Q9HC07 324 aa17.11■□□□□ 0.33
CLDN3-201ENST00000395145 FKBP14Q9NWM8 211 aa17.11■□□□□ 0.33
CLDN3-201ENST00000395145 TMEM160Q9NX00 188 aa17.11■□□□□ 0.33
CLDN3-201ENST00000395145 RRP15Q9Y3B9 282 aaKnown RBP17.11■□□□□ 0.33
CLDN3-201ENST00000395145 PPIAL4AQ9Y536 164 aa17.11■□□□□ 0.33
CLDN3-201ENST00000395145 OR5B21A6NL26 309 aa17.1■□□□□ 0.33
CLDN3-201ENST00000395145 F5H0A9 414 aaPredicted RBP17.1■□□□□ 0.33
CLDN3-201ENST00000395145 TGFAP01135 160 aa17.1■□□□□ 0.33
CLDN3-201ENST00000395145 LHBP01229 141 aa17.1■□□□□ 0.33
CLDN3-201ENST00000395145 MYL12AP19105 171 aa17.1■□□□□ 0.33
CLDN3-201ENST00000395145 MYF6P23409 242 aa17.1■□□□□ 0.33
CLDN3-201ENST00000395145 CPT2P23786 658 aa17.1■□□□□ 0.33
CLDN3-201ENST00000395145 GBX2P52951 348 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms