RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 PTGFRP43088 359 aa12.84□□□□□ -0.35
TCOF1-202ENST00000377797 EDDM3BP56851 147 aa12.84□□□□□ -0.35
TCOF1-202ENST00000377797 OSR2Q8N2R0 312 aa12.84□□□□□ -0.35
TCOF1-202ENST00000377797 STOML3Q8TAV4 291 aa12.84□□□□□ -0.35
TCOF1-202ENST00000377797 SLC26A1Q9H2B4 701 aa12.84□□□□□ -0.35
TCOF1-202ENST00000377797 V9GYH0 126 aa12.84□□□□□ -0.35
TCOF1-202ENST00000377797 M0R1B8 84 aa12.84□□□□□ -0.35
TCOF1-202ENST00000377797 CCSO14618 274 aa12.84□□□□□ -0.35
TCOF1-202ENST00000377797 SSX4O60224 188 aa12.84□□□□□ -0.35
TCOF1-202ENST00000377797 S100A2P29034 98 aa12.84□□□□□ -0.35
TCOF1-202ENST00000377797 GABRA4P48169 554 aa12.84□□□□□ -0.35
TCOF1-202ENST00000377797 GK2Q14410 553 aaPredicted RBP12.84□□□□□ -0.35
TCOF1-202ENST00000377797 SLC22A25Q6T423 547 aa12.84□□□□□ -0.35
TCOF1-202ENST00000377797 GFRALQ6UXV0 394 aa12.84□□□□□ -0.35
TCOF1-202ENST00000377797 TTTY12Q9BZ98 90 aa12.84□□□□□ -0.35
TCOF1-202ENST00000377797 SMIM3Q9BZL3 60 aa12.84□□□□□ -0.35
TCOF1-202ENST00000377797 TRGV8A0A0C4DH27 118 aa12.83□□□□□ -0.36
TCOF1-202ENST00000377797 MS4A18H0YCH9 400 aa12.83□□□□□ -0.36
TCOF1-202ENST00000377797 IGF2P01344 180 aa12.83□□□□□ -0.36
TCOF1-202ENST00000377797 MS4A18Q3C1V0 323 aa12.83□□□□□ -0.36
TCOF1-202ENST00000377797 ZNF2Q9BSG1 426 aaPredicted RBP12.83□□□□□ -0.36
TCOF1-202ENST00000377797 PHF1O43189 567 aaPredicted RBP12.83□□□□□ -0.36
TCOF1-202ENST00000377797 SCAND1P57086 179 aa12.83□□□□□ -0.36
TCOF1-202ENST00000377797 KCNK15Q9H427 330 aa12.83□□□□□ -0.36
TCOF1-202ENST00000377797 MTFP1Q9UDX5 166 aa12.83□□□□□ -0.36
TCOF1-202ENST00000377797 IGLV3-12A0A075B6K2 115 aa12.83□□□□□ -0.36
TCOF1-202ENST00000377797 RPS23P62266 143 aaKnown RBP12.83□□□□□ -0.36
TCOF1-202ENST00000377797 OPCMLQ14982 345 aa12.83□□□□□ -0.36
TCOF1-202ENST00000377797 IAH1Q2TAA2 248 aaPredicted RBP12.83□□□□□ -0.36
TCOF1-202ENST00000377797 OR2T2Q6IF00 324 aa12.83□□□□□ -0.36
TCOF1-202ENST00000377797 KIRREL1Q96J84 757 aa12.83□□□□□ -0.36
TCOF1-202ENST00000377797 UBL7Q96S82 380 aaPredicted RBP12.83□□□□□ -0.36
TCOF1-202ENST00000377797 RALGAPA1Q6GYQ0 2036 aa12.83□□□□□ -0.36
TCOF1-202ENST00000377797 DUSP1P28562 367 aa12.83□□□□□ -0.36
TCOF1-202ENST00000377797 GPM6AP51674 278 aa12.83□□□□□ -0.36
TCOF1-202ENST00000377797 MRPS34P82930 218 aaKnown RBP12.83□□□□□ -0.36
TCOF1-202ENST00000377797 WFDC8Q8IUA0 241 aa12.83□□□□□ -0.36
TCOF1-202ENST00000377797 TMEM251Q8N6I4 163 aa12.83□□□□□ -0.36
TCOF1-202ENST00000377797 HGDQ93099 445 aa12.83□□□□□ -0.36
TCOF1-202ENST00000377797 TINAGL1Q9GZM7 467 aaPredicted RBP12.83□□□□□ -0.36
TCOF1-202ENST00000377797 ZNF71Q9NQZ8 489 aaPredicted RBP12.83□□□□□ -0.36
TCOF1-202ENST00000377797 FOXJ2Q9P0K8 574 aa12.83□□□□□ -0.36
TCOF1-202ENST00000377797 H7C1Q1 480 aa12.82□□□□□ -0.36
TCOF1-202ENST00000377797 ERVK-16P61578 105 aa12.82□□□□□ -0.36
TCOF1-202ENST00000377797 OR52W1Q6IF63 320 aa12.82□□□□□ -0.36
TCOF1-202ENST00000377797 MARCH1Q8TCQ1 289 aa12.82□□□□□ -0.36
TCOF1-202ENST00000377797 NEURL2Q9BR09 285 aa12.82□□□□□ -0.36
TCOF1-202ENST00000377797 AIFM2Q9BRQ8 373 aa12.82□□□□□ -0.36
TCOF1-202ENST00000377797 SMCO3A2RU48 225 aa12.82□□□□□ -0.36
TCOF1-202ENST00000377797 TMEM200CA6NKL6 621 aa12.82□□□□□ -0.36
TCOF1-202ENST00000377797 C1QBP02746 253 aa12.82□□□□□ -0.36
TCOF1-202ENST00000377797 TBPP20226 339 aa12.82□□□□□ -0.36
TCOF1-202ENST00000377797 KCNK17Q96T54 332 aa12.82□□□□□ -0.36
TCOF1-202ENST00000377797 UPK3AO75631 287 aa12.82□□□□□ -0.36
TCOF1-202ENST00000377797 OR5H8P0DN80 308 aa12.82□□□□□ -0.36
TCOF1-202ENST00000377797 ECI1P42126 302 aa12.82□□□□□ -0.36
TCOF1-202ENST00000377797 SSBP1Q04837 148 aaKnown RBP12.82□□□□□ -0.36
TCOF1-202ENST00000377797 OR8B8Q15620 311 aa12.82□□□□□ -0.36
TCOF1-202ENST00000377797 MRPL14Q6P1L8 145 aaKnown RBP12.82□□□□□ -0.36
TCOF1-202ENST00000377797 DPPA2Q7Z7J5 298 aa12.82□□□□□ -0.36
TCOF1-202ENST00000377797 SLC30A7Q8NEW0 376 aa12.82□□□□□ -0.36
TCOF1-202ENST00000377797 MESP1Q9BRJ9 268 aa12.82□□□□□ -0.36
TCOF1-202ENST00000377797 GPR35Q9HC97 309 aa12.82□□□□□ -0.36
TCOF1-202ENST00000377797 IGLV1-36A0A0B4J1U3 117 aa12.82□□□□□ -0.36
TCOF1-202ENST00000377797 SERPINE3A8MV23 424 aa12.82□□□□□ -0.36
TCOF1-202ENST00000377797 APOC3P02656 99 aa12.82□□□□□ -0.36
TCOF1-202ENST00000377797 SDHBP21912 280 aa12.82□□□□□ -0.36
TCOF1-202ENST00000377797 OR3A4PP47883 348 aa12.82□□□□□ -0.36
TCOF1-202ENST00000377797 POU4F3Q15319 338 aa12.82□□□□□ -0.36
TCOF1-202ENST00000377797 ZNF426Q9BUY5 554 aa12.82□□□□□ -0.36
TCOF1-202ENST00000377797 OPA3Q9H6K4 179 aa12.82□□□□□ -0.36
TCOF1-202ENST00000377797 A0A1B0GV50 99 aa12.81□□□□□ -0.36
TCOF1-202ENST00000377797 SIRPB1O00241 398 aa12.81□□□□□ -0.36
TCOF1-202ENST00000377797 RPS4XP62701 263 aaKnown RBP12.81□□□□□ -0.36
TCOF1-202ENST00000377797 PDCD1Q15116 288 aa12.81□□□□□ -0.36
TCOF1-202ENST00000377797 GLYATL2Q8WU03 294 aa12.81□□□□□ -0.36
TCOF1-202ENST00000377797 YIPF5Q969M3 257 aa12.81□□□□□ -0.36
TCOF1-202ENST00000377797 ACTL6BO94805 426 aa12.81□□□□□ -0.36
TCOF1-202ENST00000377797 BAMBIQ13145 260 aa12.81□□□□□ -0.36
TCOF1-202ENST00000377797 LINC01590Q5TEZ4 76 aa12.81□□□□□ -0.36
TCOF1-202ENST00000377797 TSPO2Q5TGU0 170 aa12.81□□□□□ -0.36
TCOF1-202ENST00000377797 LILRB2Q8N423 598 aa12.81□□□□□ -0.36
TCOF1-202ENST00000377797 ARHGAP5-AS1Q96IT6 56 aa12.81□□□□□ -0.36
TCOF1-202ENST00000377797 PCDHB10Q9UN67 800 aa12.81□□□□□ -0.36
TCOF1-202ENST00000377797 A0A1B0GUH1 482 aa12.81□□□□□ -0.36
TCOF1-202ENST00000377797 KIR3DL2P43630 455 aa12.81□□□□□ -0.36
TCOF1-202ENST00000377797 CDCP2Q5VXM1 449 aa12.81□□□□□ -0.36
TCOF1-202ENST00000377797 TMEM38BQ9NVV0 291 aa12.81□□□□□ -0.36
TCOF1-202ENST00000377797 PYCARD-AS1I3L0S3 204 aa12.81□□□□□ -0.36
TCOF1-202ENST00000377797 CST2P09228 141 aa12.81□□□□□ -0.36
TCOF1-202ENST00000377797 TPT1P13693 172 aaKnown RBP12.81□□□□□ -0.36
TCOF1-202ENST00000377797 BMP5P22003 454 aa12.81□□□□□ -0.36
TCOF1-202ENST00000377797 ZNF79Q15937 498 aa12.81□□□□□ -0.36
TCOF1-202ENST00000377797 SFRP5Q5T4F7 317 aa12.81□□□□□ -0.36
TCOF1-202ENST00000377797 ALKAL2Q6UX46 152 aa12.81□□□□□ -0.36
TCOF1-202ENST00000377797 TECTBQ96PL2 329 aa12.81□□□□□ -0.36
TCOF1-202ENST00000377797 OR4E1P0C645 316 aa12.8□□□□□ -0.36
TCOF1-202ENST00000377797 CAMLGP49069 296 aa12.8□□□□□ -0.36
TCOF1-202ENST00000377797 CATR1Q13166 79 aa12.8□□□□□ -0.36
TCOF1-202ENST00000377797 OR2W3Q7Z3T1 314 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms