RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 GPR78Q96P69 363 aa10.94□□□□□ -0.66
PCF11-201ENST00000298281 A0A0U1RQS6 177 aa10.94□□□□□ -0.66
PCF11-201ENST00000298281 METRNLQ641Q3 311 aa10.94□□□□□ -0.66
PCF11-201ENST00000298281 LHX4Q969G2 390 aa10.94□□□□□ -0.66
PCF11-201ENST00000298281 DDOQ99489 341 aa10.94□□□□□ -0.66
PCF11-201ENST00000298281 TMEM9BQ9NQ34 198 aa10.94□□□□□ -0.66
PCF11-201ENST00000298281 RABAC1Q9UI14 185 aa10.94□□□□□ -0.66
PCF11-201ENST00000298281 KCNMB2Q9Y691 235 aa10.94□□□□□ -0.66
PCF11-201ENST00000298281 NID1P14543 1247 aa10.93□□□□□ -0.66
PCF11-201ENST00000298281 VMA21Q3ZAQ7 101 aa10.93□□□□□ -0.66
PCF11-201ENST00000298281 RASL11BQ9BPW5 248 aa10.93□□□□□ -0.66
PCF11-201ENST00000298281 JTBO76095 146 aa10.93□□□□□ -0.66
PCF11-201ENST00000298281 SMIM21Q3B7S5 101 aa10.93□□□□□ -0.66
PCF11-201ENST00000298281 LILRA2Q8N149 483 aa10.93□□□□□ -0.66
PCF11-201ENST00000298281 NRG4Q8WWG1 115 aa10.93□□□□□ -0.66
PCF11-201ENST00000298281 RDH5Q92781 318 aa10.93□□□□□ -0.66
PCF11-201ENST00000298281 CIB3Q96Q77 187 aaPredicted RBP10.93□□□□□ -0.66
PCF11-201ENST00000298281 UQCC2Q9BRT2 126 aa10.93□□□□□ -0.66
PCF11-201ENST00000298281 SYT11Q9BT88 431 aa10.93□□□□□ -0.66
PCF11-201ENST00000298281 C11orf68Q9H3H3 251 aaKnown RBP10.93□□□□□ -0.66
PCF11-201ENST00000298281 ING1Q9UK53 422 aaPredicted RBP10.93□□□□□ -0.66
PCF11-201ENST00000298281 ZNF407Q9C0G0 2248 aa10.93□□□□□ -0.66
PCF11-201ENST00000298281 A0A1W2PRD5 423 aa10.93□□□□□ -0.66
PCF11-201ENST00000298281 A0A1W2PRF3 423 aa10.93□□□□□ -0.66
PCF11-201ENST00000298281 A0A1W2PRM7 423 aa10.93□□□□□ -0.66
PCF11-201ENST00000298281 KLF7O75840 302 aaPredicted RBP10.93□□□□□ -0.66
PCF11-201ENST00000298281 MELTFP08582 738 aa10.93□□□□□ -0.66
PCF11-201ENST00000298281 LYZP61626 148 aa10.93□□□□□ -0.66
PCF11-201ENST00000298281 ZNF346Q9UL40 294 aaKnown RBP10.93□□□□□ -0.66
PCF11-201ENST00000298281 A0A1W2PPQ1 181 aa10.93□□□□□ -0.66
PCF11-201ENST00000298281 TMEM262E9PQX1 116 aa10.93□□□□□ -0.66
PCF11-201ENST00000298281 DHRS3O75911 302 aa10.93□□□□□ -0.66
PCF11-201ENST00000298281 NRASP01111 189 aa10.93□□□□□ -0.66
PCF11-201ENST00000298281 SMN1Q16637 294 aaKnown RBP10.93□□□□□ -0.66
PCF11-201ENST00000298281 DYNC2LI1Q8TCX1 351 aa10.93□□□□□ -0.66
PCF11-201ENST00000298281 EMC6Q9BV81 110 aa10.93□□□□□ -0.66
PCF11-201ENST00000298281 TMEM129A0AVI4 362 aa10.93□□□□□ -0.66
PCF11-201ENST00000298281 F2RL2O00254 374 aa10.93□□□□□ -0.66
PCF11-201ENST00000298281 MFAP4P55083 255 aa10.93□□□□□ -0.66
PCF11-201ENST00000298281 CD226Q15762 336 aa10.93□□□□□ -0.66
PCF11-201ENST00000298281 GUCA2BQ16661 112 aa10.93□□□□□ -0.66
PCF11-201ENST00000298281 ALKAL1Q6UXT8 129 aa10.93□□□□□ -0.66
PCF11-201ENST00000298281 CXorf67Q86X51 503 aaPredicted RBP10.93□□□□□ -0.66
PCF11-201ENST00000298281 NAA60Q9H7X0 242 aa10.93□□□□□ -0.66
PCF11-201ENST00000298281 ANXA10Q9UJ72 324 aa10.93□□□□□ -0.66
PCF11-201ENST00000298281 OR2F2O95006 317 aa10.93□□□□□ -0.66
PCF11-201ENST00000298281 LALBAP00709 142 aa10.93□□□□□ -0.66
PCF11-201ENST00000298281 ORM2P19652 201 aa10.93□□□□□ -0.66
PCF11-201ENST00000298281 COX5AP20674 150 aa10.93□□□□□ -0.66
PCF11-201ENST00000298281 AGERQ15109 404 aa10.93□□□□□ -0.66
PCF11-201ENST00000298281 CLEC9AQ6UXN8 241 aa10.93□□□□□ -0.66
PCF11-201ENST00000298281 OR13F1Q8NGS4 319 aa10.93□□□□□ -0.66
PCF11-201ENST00000298281 MARCH3Q86UD3 253 aa10.92□□□□□ -0.66
PCF11-201ENST00000298281 SIAH3Q8IW03 269 aa10.92□□□□□ -0.66
PCF11-201ENST00000298281 SARAFQ96BY9 339 aa10.92□□□□□ -0.66
PCF11-201ENST00000298281 SLAMF8Q9P0V8 285 aa10.92□□□□□ -0.66
PCF11-201ENST00000298281 LRP6O75581 1613 aa10.92□□□□□ -0.66
PCF11-201ENST00000298281 ERVFC1P60507 584 aa10.92□□□□□ -0.66
PCF11-201ENST00000298281 ZNF343Q6P1L6 599 aa10.92□□□□□ -0.66
PCF11-201ENST00000298281 MVB12AQ96EY5 273 aa10.92□□□□□ -0.66
PCF11-201ENST00000298281 C1QTNF3Q9BXJ4 246 aa10.92□□□□□ -0.66
PCF11-201ENST00000298281 USP22Q9UPT9 525 aa10.92□□□□□ -0.66
PCF11-201ENST00000298281 TIMM10BQ9Y5J6 103 aa10.92□□□□□ -0.66
PCF11-201ENST00000298281 TMEM127O75204 238 aa10.92□□□□□ -0.66
PCF11-201ENST00000298281 OR2J2O76002 312 aa10.92□□□□□ -0.66
PCF11-201ENST00000298281 OR4A47Q6IF82 309 aa10.92□□□□□ -0.66
PCF11-201ENST00000298281 TMEM88Q6PEY1 159 aa10.92□□□□□ -0.66
PCF11-201ENST00000298281 ZDHHC23Q8IYP9 409 aa10.92□□□□□ -0.66
PCF11-201ENST00000298281 MAP1LC3CQ9BXW4 147 aa10.92□□□□□ -0.66
PCF11-201ENST00000298281 FOXQ1Q9C009 403 aa10.92□□□□□ -0.66
PCF11-201ENST00000298281 NRSN2Q9GZP1 204 aa10.92□□□□□ -0.66
PCF11-201ENST00000298281 TUBAL3A6NHL2 446 aa10.92□□□□□ -0.66
PCF11-201ENST00000298281 HOXC11O43248 304 aaPredicted RBP10.92□□□□□ -0.66
PCF11-201ENST00000298281 CRYABP02511 175 aaKnown RBP10.92□□□□□ -0.66
PCF11-201ENST00000298281 HOXC4P09017 264 aaPredicted RBP10.92□□□□□ -0.66
PCF11-201ENST00000298281 SDHBP21912 280 aa10.92□□□□□ -0.66
PCF11-201ENST00000298281 TTC32Q5I0X7 151 aa10.92□□□□□ -0.66
PCF11-201ENST00000298281 AMIGO3Q86WK7 504 aa10.92□□□□□ -0.66
PCF11-201ENST00000298281 OR51B4Q9Y5P0 310 aa10.92□□□□□ -0.66
PCF11-201ENST00000298281 NUP98P52948 1817 aa10.92□□□□□ -0.66
PCF11-201ENST00000298281 ZNF83P51522 516 aa10.92□□□□□ -0.66
PCF11-201ENST00000298281 OLIG1Q8TAK6 271 aa10.92□□□□□ -0.66
PCF11-201ENST00000298281 SCN11AQ9UI33 1791 aa10.92□□□□□ -0.66
PCF11-201ENST00000298281 TRBV23-1A0A0A0MS06 115 aa10.92□□□□□ -0.66
PCF11-201ENST00000298281 LMX1BO60663 402 aa10.92□□□□□ -0.66
PCF11-201ENST00000298281 CSO75390 466 aaKnown RBP10.92□□□□□ -0.66
PCF11-201ENST00000298281 KIR3DL2P43630 455 aa10.92□□□□□ -0.66
PCF11-201ENST00000298281 FAM71E1Q6IPT2 247 aa10.92□□□□□ -0.66
PCF11-201ENST00000298281 ETFBKMTQ8IXQ9 262 aa10.92□□□□□ -0.66
PCF11-201ENST00000298281 TMEM255BQ8WV15 326 aa10.92□□□□□ -0.66
PCF11-201ENST00000298281 ISL2Q96A47 359 aa10.92□□□□□ -0.66
PCF11-201ENST00000298281 MYOZ1Q9NP98 299 aaPredicted RBP10.92□□□□□ -0.66
PCF11-201ENST00000298281 SOX21Q9Y651 276 aaPredicted RBP10.92□□□□□ -0.66
PCF11-201ENST00000298281 IGLV3-10A0A075B6K4 115 aa10.91□□□□□ -0.66
PCF11-201ENST00000298281 SELENBP1Q13228 472 aa10.91□□□□□ -0.66
PCF11-201ENST00000298281 FNDC7Q5VTL7 733 aa10.91□□□□□ -0.66
PCF11-201ENST00000298281 ANKRD34AQ69YU3 496 aa10.91□□□□□ -0.66
PCF11-201ENST00000298281 EDARADDQ8WWZ3 215 aa10.91□□□□□ -0.66
PCF11-201ENST00000298281 ST8SIA1Q92185 356 aa10.91□□□□□ -0.66
PCF11-201ENST00000298281 ELSPBP1Q96BH3 223 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms