RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 SELENOFO60613 162 aa13.17□□□□□ -0.3
CRLF3-203ENST00000578692 TIPRLO75663 272 aa13.17□□□□□ -0.3
CRLF3-203ENST00000578692 TOX4O94842 621 aa13.17□□□□□ -0.3
CRLF3-203ENST00000578692 GNALP38405 381 aa13.17□□□□□ -0.3
CRLF3-203ENST00000578692 CBX1P83916 185 aa13.17□□□□□ -0.3
CRLF3-203ENST00000578692 FLOT2Q14254 428 aa13.17□□□□□ -0.3
CRLF3-203ENST00000578692 SNCBQ16143 134 aa13.17□□□□□ -0.3
CRLF3-203ENST00000578692 DEFB112Q30KQ8 113 aa13.17□□□□□ -0.3
CRLF3-203ENST00000578692 PNLDC1Q8NA58 520 aaKnown RBP13.17□□□□□ -0.3
CRLF3-203ENST00000578692 LRRC29Q8WV35 223 aa13.17□□□□□ -0.3
CRLF3-203ENST00000578692 ZDHHC16Q969W1 377 aa13.17□□□□□ -0.3
CRLF3-203ENST00000578692 PRDM13Q9H4Q3 707 aa13.17□□□□□ -0.3
CRLF3-203ENST00000578692 KIF17Q9P2E2 1029 aa13.17□□□□□ -0.3
CRLF3-203ENST00000578692 KAAG1Q9UBP8 84 aa13.17□□□□□ -0.3
CRLF3-203ENST00000578692 DNAJB9Q9UBS3 223 aa13.17□□□□□ -0.3
CRLF3-203ENST00000578692 RHBDD3Q9Y3P4 386 aa13.17□□□□□ -0.3
CRLF3-203ENST00000578692 TENM1Q9UKZ4 2725 aa13.16□□□□□ -0.3
CRLF3-203ENST00000578692 IGHV3OR15-7A0A075B7D8 119 aa13.16□□□□□ -0.3
CRLF3-203ENST00000578692 TMPRSS2O15393 492 aa13.16□□□□□ -0.3
CRLF3-203ENST00000578692 SPRY1O43609 319 aaPredicted RBP13.16□□□□□ -0.3
CRLF3-203ENST00000578692 FKBP6O75344 327 aa13.16□□□□□ -0.3
CRLF3-203ENST00000578692 SFTPBP07988 381 aa13.16□□□□□ -0.3
CRLF3-203ENST00000578692 MUC1P15941 1255 aaPredicted RBP13.16□□□□□ -0.3
CRLF3-203ENST00000578692 CFHR2P36980 270 aa13.16□□□□□ -0.3
CRLF3-203ENST00000578692 NAA10P41227 235 aaPredicted RBP13.16□□□□□ -0.3
CRLF3-203ENST00000578692 MICBQ29980 383 aa13.16□□□□□ -0.3
CRLF3-203ENST00000578692 C11orf91Q3C1V1 193 aa13.16□□□□□ -0.3
CRLF3-203ENST00000578692 DNAL1Q4LDG9 190 aa13.16□□□□□ -0.3
CRLF3-203ENST00000578692 SLC35D3Q5M8T2 416 aa13.16□□□□□ -0.3
CRLF3-203ENST00000578692 TMEM236Q5W0B7 351 aa13.16□□□□□ -0.3
CRLF3-203ENST00000578692 C16orf87Q6PH81 154 aa13.16□□□□□ -0.3
CRLF3-203ENST00000578692 WDR82Q6UXN9 313 aa13.16□□□□□ -0.3
CRLF3-203ENST00000578692 BTN2A1Q7KYR7 527 aa13.16□□□□□ -0.3
CRLF3-203ENST00000578692 GALNT4Q8N4A0 578 aa13.16□□□□□ -0.3
CRLF3-203ENST00000578692 FTMTQ8N4E7 242 aa13.16□□□□□ -0.3
CRLF3-203ENST00000578692 WDFY2Q96P53 400 aa13.16□□□□□ -0.3
CRLF3-203ENST00000578692 MICU1Q9BPX6 476 aa13.16□□□□□ -0.3
CRLF3-203ENST00000578692 PAPOLGQ9BWT3 736 aaKnown RBP13.16□□□□□ -0.3
CRLF3-203ENST00000578692 TEX12Q9BXU0 123 aa13.16□□□□□ -0.3
CRLF3-203ENST00000578692 MPC1Q9Y5U8 109 aa13.16□□□□□ -0.3
CRLF3-203ENST00000578692 ANXA2P2A6NMY6 339 aa13.15□□□□□ -0.3
CRLF3-203ENST00000578692 DYNC1I1O14576 645 aa13.15□□□□□ -0.3
CRLF3-203ENST00000578692 CDIPTO14735 213 aa13.15□□□□□ -0.3
CRLF3-203ENST00000578692 HOXA3O43365 443 aaPredicted RBP13.15□□□□□ -0.3
CRLF3-203ENST00000578692 FCN3O75636 299 aa13.15□□□□□ -0.3
CRLF3-203ENST00000578692 ECDO95905 644 aaPredicted RBP13.15□□□□□ -0.3
CRLF3-203ENST00000578692 MMP9P14780 707 aa13.15□□□□□ -0.3
CRLF3-203ENST00000578692 RPS7P62081 194 aaKnown RBP13.15□□□□□ -0.3
CRLF3-203ENST00000578692 CSNK2BP67870 215 aa13.15□□□□□ -0.3
CRLF3-203ENST00000578692 IL5RAQ01344 420 aa13.15□□□□□ -0.3
CRLF3-203ENST00000578692 METTL11BQ5VVY1 283 aa13.15□□□□□ -0.3
CRLF3-203ENST00000578692 SHISA2Q6UWI4 295 aa13.15□□□□□ -0.3
CRLF3-203ENST00000578692 PAPD5Q8NDF8 572 aaKnown RBP13.15□□□□□ -0.3
CRLF3-203ENST00000578692 BBS1Q8NFJ9 593 aa13.15□□□□□ -0.3
CRLF3-203ENST00000578692 BCAS4Q8TDM0 211 aa13.15□□□□□ -0.3
CRLF3-203ENST00000578692 SLC7A6OSQ96CW6 309 aaPredicted RBP13.15□□□□□ -0.3
CRLF3-203ENST00000578692 ITPKCQ96DU7 683 aa13.15□□□□□ -0.3
CRLF3-203ENST00000578692 TBX15Q96SF7 602 aa13.15□□□□□ -0.3
CRLF3-203ENST00000578692 CCL13Q99616 98 aa13.15□□□□□ -0.3
CRLF3-203ENST00000578692 NIPAL2Q9H841 368 aa13.15□□□□□ -0.3
CRLF3-203ENST00000578692 POMPQ9Y244 141 aa13.15□□□□□ -0.3
CRLF3-203ENST00000578692 CENPVL3A0A0U1RRI6 287 aa13.14□□□□□ -0.31
CRLF3-203ENST00000578692 TCRBV3S1A0A5B6 114 aa13.14□□□□□ -0.31
CRLF3-203ENST00000578692 ZNF850A8MQ14 1090 aa13.14□□□□□ -0.31
CRLF3-203ENST00000578692 ALOX5APP20292 161 aa13.14□□□□□ -0.31
CRLF3-203ENST00000578692 SLC2A5P22732 501 aa13.14□□□□□ -0.31
CRLF3-203ENST00000578692 ACKR3P25106 362 aa13.14□□□□□ -0.31
CRLF3-203ENST00000578692 HCCSP53701 268 aa13.14□□□□□ -0.31
CRLF3-203ENST00000578692 ARF6P62330 175 aa13.14□□□□□ -0.31
CRLF3-203ENST00000578692 IL13RA1P78552 427 aa13.14□□□□□ -0.31
CRLF3-203ENST00000578692 PRDX4Q13162 271 aa13.14□□□□□ -0.31
CRLF3-203ENST00000578692 PDCD1Q15116 288 aa13.14□□□□□ -0.31
CRLF3-203ENST00000578692 RUSC1-AS1Q66K80 236 aa13.14□□□□□ -0.31
CRLF3-203ENST00000578692 Q6YL49 198 aa13.14□□□□□ -0.31
CRLF3-203ENST00000578692 SLC36A1Q7Z2H8 476 aa13.14□□□□□ -0.31
CRLF3-203ENST00000578692 KRT77Q7Z794 578 aa13.14□□□□□ -0.31
CRLF3-203ENST00000578692 ST8SIA4Q92187 359 aa13.14□□□□□ -0.31
CRLF3-203ENST00000578692 PIGCQ92535 297 aa13.14□□□□□ -0.31
CRLF3-203ENST00000578692 LYZL4Q96KX0 146 aa13.14□□□□□ -0.31
CRLF3-203ENST00000578692 RTL8AQ9BWD3 113 aa13.14□□□□□ -0.31
CRLF3-203ENST00000578692 SIRPDQ9H106 197 aa13.14□□□□□ -0.31
CRLF3-203ENST00000578692 TLNRD1Q9H1K6 362 aa13.14□□□□□ -0.31
CRLF3-203ENST00000578692 CNTD2Q9H8S5 307 aa13.14□□□□□ -0.31
CRLF3-203ENST00000578692 UNKLQ9H9P5 680 aaKnown RBP13.14□□□□□ -0.31
CRLF3-203ENST00000578692 SLC25A19Q9HC21 320 aa13.14□□□□□ -0.31
CRLF3-203ENST00000578692 NOX4Q9NPH5 578 aa13.14□□□□□ -0.31
CRLF3-203ENST00000578692 TVP23BQ9NYZ1 205 aa13.14□□□□□ -0.31
CRLF3-203ENST00000578692 LAMP5Q9UJQ1 280 aa13.14□□□□□ -0.31
CRLF3-203ENST00000578692 KLHDC2Q9Y2U9 406 aa13.14□□□□□ -0.31
CRLF3-203ENST00000578692 POM121CA8CG34 1229 aa13.13□□□□□ -0.31
CRLF3-203ENST00000578692 SRRM5B3KS81 715 aa13.13□□□□□ -0.31
CRLF3-203ENST00000578692 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.13□□□□□ -0.31
CRLF3-203ENST00000578692 DNAJC8O75937 253 aaPredicted RBP13.13□□□□□ -0.31
CRLF3-203ENST00000578692 CST4P01036 141 aa13.13□□□□□ -0.31
CRLF3-203ENST00000578692 CRISP1P54107 249 aa13.13□□□□□ -0.31
CRLF3-203ENST00000578692 ELF3P78545 371 aaPredicted RBP13.13□□□□□ -0.31
CRLF3-203ENST00000578692 APOFQ13790 326 aa13.13□□□□□ -0.31
CRLF3-203ENST00000578692 SNAPC1Q16533 368 aa13.13□□□□□ -0.31
CRLF3-203ENST00000578692 WDR38Q5JTN6 314 aa13.13□□□□□ -0.31
CRLF3-203ENST00000578692 OR8B12Q8NGG6 310 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 294.9 ms