RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 DOK2O60496 412 aa4.16□□□□□ -1.74
KARSP3-201ENST00000571212 SCO1O75880 301 aa4.16□□□□□ -1.74
KARSP3-201ENST00000571212 PTBP3O95758 552 aaKnown RBP4.16□□□□□ -1.74
KARSP3-201ENST00000571212 APOA1P02647 267 aa4.16□□□□□ -1.74
KARSP3-201ENST00000571212 IFNA4P05014 189 aa4.16□□□□□ -1.74
KARSP3-201ENST00000571212 PNMTP11086 282 aa4.16□□□□□ -1.74
KARSP3-201ENST00000571212 IL11P20809 199 aa4.16□□□□□ -1.74
KARSP3-201ENST00000571212 S100PP25815 95 aa4.16□□□□□ -1.74
KARSP3-201ENST00000571212 ERP29P30040 261 aaKnown RBP4.16□□□□□ -1.74
KARSP3-201ENST00000571212 CAPGP40121 348 aa4.16□□□□□ -1.74
KARSP3-201ENST00000571212 RBM34P42696 430 aaKnown RBP4.16□□□□□ -1.74
KARSP3-201ENST00000571212 SLC15A1P46059 708 aa4.16□□□□□ -1.74
KARSP3-201ENST00000571212 OR1E2P47887 323 aa4.16□□□□□ -1.74
KARSP3-201ENST00000571212 MTNR1AP48039 350 aa4.16□□□□□ -1.74
KARSP3-201ENST00000571212 RFX3P48380 749 aa4.16□□□□□ -1.74
KARSP3-201ENST00000571212 IDH2P48735 452 aaKnown RBP4.16□□□□□ -1.74
KARSP3-201ENST00000571212 POLR2HP52434 150 aaKnown RBP4.16□□□□□ -1.74
KARSP3-201ENST00000571212 CDH12P55289 794 aa4.16□□□□□ -1.74
KARSP3-201ENST00000571212 CTBP2P56545 445 aa4.16□□□□□ -1.74
KARSP3-201ENST00000571212 DEFA1P59665 94 aa4.16□□□□□ -1.74
KARSP3-201ENST00000571212 DEFA3P59666 94 aa4.16□□□□□ -1.74
KARSP3-201ENST00000571212 GABARAPL2P60520 117 aa4.16□□□□□ -1.74
KARSP3-201ENST00000571212 FOXF1Q12946 379 aa4.16□□□□□ -1.74
KARSP3-201ENST00000571212 TNK1Q13470 666 aa4.16□□□□□ -1.74
KARSP3-201ENST00000571212 BEX5Q5H9J7 111 aa4.16□□□□□ -1.74
KARSP3-201ENST00000571212 ZNF770Q6IQ21 691 aaPredicted RBP4.16□□□□□ -1.74
KARSP3-201ENST00000571212 PLXDC2Q6UX71 529 aa4.16□□□□□ -1.74
KARSP3-201ENST00000571212 TFAP2EQ6VUC0 442 aa4.16□□□□□ -1.74
KARSP3-201ENST00000571212 TMPPEQ6ZT21 453 aa4.16□□□□□ -1.74
KARSP3-201ENST00000571212 CHMP1BQ7LBR1 199 aa4.16□□□□□ -1.74
KARSP3-201ENST00000571212 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.16□□□□□ -1.74
KARSP3-201ENST00000571212 HMGN2P46Q86SG4 172 aa4.16□□□□□ -1.74
KARSP3-201ENST00000571212 LHFPL3Q86UP9 236 aa4.16□□□□□ -1.74
KARSP3-201ENST00000571212 NOXA1Q86UR1 476 aa4.16□□□□□ -1.74
KARSP3-201ENST00000571212 UBQLNLQ8IYU4 475 aa4.16□□□□□ -1.74
KARSP3-201ENST00000571212 RNF113BQ8IZP6 322 aaKnown RBP4.16□□□□□ -1.74
KARSP3-201ENST00000571212 CNEP1R1Q8N9A8 125 aa4.16□□□□□ -1.74
KARSP3-201ENST00000571212 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.16□□□□□ -1.74
KARSP3-201ENST00000571212 GATSQ8NAP1 163 aa4.16□□□□□ -1.74
KARSP3-201ENST00000571212 NEXN-AS1Q8NBZ9 246 aa4.16□□□□□ -1.74
KARSP3-201ENST00000571212 OR4K17Q8NGC6 315 aa4.16□□□□□ -1.74
KARSP3-201ENST00000571212 ZFAND1Q8TCF1 268 aa4.16□□□□□ -1.74
KARSP3-201ENST00000571212 TMED6Q8WW62 240 aa4.16□□□□□ -1.74
KARSP3-201ENST00000571212 SNAPC3Q92966 411 aa4.16□□□□□ -1.74
KARSP3-201ENST00000571212 SFXN2Q96NB2 322 aa4.16□□□□□ -1.74
KARSP3-201ENST00000571212 MCHR1Q99705 422 aa4.16□□□□□ -1.74
KARSP3-201ENST00000571212 IFT27Q9BW83 186 aa4.16□□□□□ -1.74
KARSP3-201ENST00000571212 NAA50Q9GZZ1 169 aaKnown RBP4.16□□□□□ -1.74
KARSP3-201ENST00000571212 RACGAP1Q9H0H5 632 aa4.16□□□□□ -1.74
KARSP3-201ENST00000571212 ALX4Q9H161 411 aaPredicted RBP4.16□□□□□ -1.74
KARSP3-201ENST00000571212 OR51M1Q9H341 326 aa4.16□□□□□ -1.74
KARSP3-201ENST00000571212 RNF122Q9H9V4 155 aa4.16□□□□□ -1.74
KARSP3-201ENST00000571212 NMNAT1Q9HAN9 279 aaPredicted RBP4.16□□□□□ -1.74
KARSP3-201ENST00000571212 MEPEQ9NQ76 525 aaPredicted RBP4.16□□□□□ -1.74
KARSP3-201ENST00000571212 CTPS2Q9NRF8 586 aa4.16□□□□□ -1.74
KARSP3-201ENST00000571212 GSN-AS1Q9NRJ2 163 aa4.16□□□□□ -1.74
KARSP3-201ENST00000571212 TMEM160Q9NX00 188 aa4.16□□□□□ -1.74
KARSP3-201ENST00000571212 TRAPPC4Q9Y296 219 aa4.16□□□□□ -1.74
KARSP3-201ENST00000571212 SLC9A8Q9Y2E8 581 aa4.16□□□□□ -1.74
KARSP3-201ENST00000571212 HDGFL3Q9Y3E1 203 aa4.16□□□□□ -1.74
KARSP3-201ENST00000571212 ANK3Q12955 4377 aaKnown RBP4.15□□□□□ -1.74
KARSP3-201ENST00000571212 CADP27708 2225 aa4.15□□□□□ -1.74
KARSP3-201ENST00000571212 FREM1Q5H8C1 2179 aa4.15□□□□□ -1.74
KARSP3-201ENST00000571212 ALPK2Q86TB3 2170 aa4.15□□□□□ -1.74
KARSP3-201ENST00000571212 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.15□□□□□ -1.75
KARSP3-201ENST00000571212 A0A087WUU8 490 aa4.15□□□□□ -1.75
KARSP3-201ENST00000571212 A0A0J9YW62 118 aa4.15□□□□□ -1.75
KARSP3-201ENST00000571212 DHRS12A0PJE2 317 aa4.15□□□□□ -1.75
KARSP3-201ENST00000571212 TMEM72A0PK05 275 aa4.15□□□□□ -1.75
KARSP3-201ENST00000571212 TRAPPC13A5PLN9 417 aa4.15□□□□□ -1.75
KARSP3-201ENST00000571212 SLC22A20A6NK97 555 aa4.15□□□□□ -1.75
KARSP3-201ENST00000571212 A8MVM7 634 aa4.15□□□□□ -1.75
KARSP3-201ENST00000571212 HSBP1L1C9JCN9 74 aa4.15□□□□□ -1.75
KARSP3-201ENST00000571212 NDUFS8O00217 210 aa4.15□□□□□ -1.75
KARSP3-201ENST00000571212 TLX2O43763 284 aaPredicted RBP4.15□□□□□ -1.75
KARSP3-201ENST00000571212 CIDEAO60543 219 aa4.15□□□□□ -1.75
KARSP3-201ENST00000571212 GABARAPO95166 117 aa4.15□□□□□ -1.75
KARSP3-201ENST00000571212 PMS2P2O95744 297 aa4.15□□□□□ -1.75
KARSP3-201ENST00000571212 CGAP01215 116 aa4.15□□□□□ -1.75
KARSP3-201ENST00000571212 OPN1MWP04001 364 aa4.15□□□□□ -1.75
KARSP3-201ENST00000571212 IFNW1P05000 195 aa4.15□□□□□ -1.75
KARSP3-201ENST00000571212 ASAH2BP0C7U1 165 aa4.15□□□□□ -1.75
KARSP3-201ENST00000571212 OPN1MW2P0DN77 364 aa4.15□□□□□ -1.75
KARSP3-201ENST00000571212 OPN1MW3P0DN78 364 aa4.15□□□□□ -1.75
KARSP3-201ENST00000571212 COX5BP10606 129 aa4.15□□□□□ -1.75
KARSP3-201ENST00000571212 FCGR1AP12314 374 aa4.15□□□□□ -1.75
KARSP3-201ENST00000571212 IL7P13232 177 aa4.15□□□□□ -1.75
KARSP3-201ENST00000571212 SHC1P29353 583 aa4.15□□□□□ -1.75
KARSP3-201ENST00000571212 RPS5P46782 204 aaKnown RBP4.15□□□□□ -1.75
KARSP3-201ENST00000571212 SUCLG1P53597 346 aaKnown RBP4.15□□□□□ -1.75
KARSP3-201ENST00000571212 ATP5J2P56134 94 aa4.15□□□□□ -1.75
KARSP3-201ENST00000571212 RGS8P57771 180 aaPredicted RBP4.15□□□□□ -1.75
KARSP3-201ENST00000571212 HOXC5Q00444 222 aa4.15□□□□□ -1.75
KARSP3-201ENST00000571212 ZNF45Q02386 682 aa4.15□□□□□ -1.75
KARSP3-201ENST00000571212 ST3GAL3Q11203 375 aa4.15□□□□□ -1.75
KARSP3-201ENST00000571212 ATP6AP1Q15904 470 aa4.15□□□□□ -1.75
KARSP3-201ENST00000571212 CLEC2AQ6UVW9 174 aa4.15□□□□□ -1.75
KARSP3-201ENST00000571212 TMPRSS11FQ6ZWK6 438 aa4.15□□□□□ -1.75
KARSP3-201ENST00000571212 RANBP3LQ86VV4 465 aaPredicted RBP4.15□□□□□ -1.75
KARSP3-201ENST00000571212 HIPK1Q86Z02 1210 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms