RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 SEC11CQ9BY50 192 aa9.41□□□□□ -0.9
USB1-212ENST00000566082 SLC25A31Q9H0C2 315 aa9.41□□□□□ -0.9
USB1-212ENST00000566082 RAB18Q9NP72 206 aa9.41□□□□□ -0.9
USB1-212ENST00000566082 FGF21Q9NSA1 209 aa9.41□□□□□ -0.9
USB1-212ENST00000566082 SMCO3A2RU48 225 aa9.41□□□□□ -0.9
USB1-212ENST00000566082 TLCD2A6NGC4 264 aa9.41□□□□□ -0.9
USB1-212ENST00000566082 J3QRE1 110 aa9.41□□□□□ -0.9
USB1-212ENST00000566082 DNASE2O00115 360 aaPredicted RBP9.41□□□□□ -0.9
USB1-212ENST00000566082 IFNA1P01562 189 aa9.41□□□□□ -0.9
USB1-212ENST00000566082 MT-ND4LP03901 98 aa9.41□□□□□ -0.9
USB1-212ENST00000566082 NAT2P11245 290 aa9.41□□□□□ -0.9
USB1-212ENST00000566082 LAP3P28838 519 aa9.41□□□□□ -0.9
USB1-212ENST00000566082 ZNF266Q14584 549 aa9.41□□□□□ -0.9
USB1-212ENST00000566082 AWAT1Q58HT5 328 aa9.41□□□□□ -0.9
USB1-212ENST00000566082 RTL6Q6ICC9 239 aa9.41□□□□□ -0.9
USB1-212ENST00000566082 DOK3Q7L591 496 aa9.41□□□□□ -0.9
USB1-212ENST00000566082 ZNF709Q8N972 641 aa9.41□□□□□ -0.9
USB1-212ENST00000566082 OR14L1PQ8NHC6 308 aa9.41□□□□□ -0.9
USB1-212ENST00000566082 RTN4IP1Q8WWV3 396 aaPredicted RBP9.41□□□□□ -0.9
USB1-212ENST00000566082 PIGQQ9BRB3 760 aa9.41□□□□□ -0.9
USB1-212ENST00000566082 MAGT1Q9H0U3 335 aa9.41□□□□□ -0.9
USB1-212ENST00000566082 GBF1Q92538 1859 aa9.41□□□□□ -0.9
USB1-212ENST00000566082 E5RGE8 158 aa9.4□□□□□ -0.9
USB1-212ENST00000566082 ANGPTL7O43827 346 aa9.4□□□□□ -0.9
USB1-212ENST00000566082 ADAM11O75078 769 aa9.4□□□□□ -0.9
USB1-212ENST00000566082 IFNA10P01566 189 aa9.4□□□□□ -0.9
USB1-212ENST00000566082 MUC1P15941 1255 aaPredicted RBP9.4□□□□□ -0.9
USB1-212ENST00000566082 FAHP16930 419 aa9.4□□□□□ -0.9
USB1-212ENST00000566082 RCC1P18754 421 aaPredicted RBP9.4□□□□□ -0.9
USB1-212ENST00000566082 OR3A4PP47883 348 aa9.4□□□□□ -0.9
USB1-212ENST00000566082 EFNA3P52797 238 aa9.4□□□□□ -0.9
USB1-212ENST00000566082 RAB11AP62491 216 aa9.4□□□□□ -0.9
USB1-212ENST00000566082 TMEM123Q8N131 208 aa9.4□□□□□ -0.9
USB1-212ENST00000566082 ZNF321PQ8N8H1 164 aa9.4□□□□□ -0.9
USB1-212ENST00000566082 SLC38A9Q8NBW4 561 aa9.4□□□□□ -0.9
USB1-212ENST00000566082 NRIP2Q9BQI9 281 aa9.4□□□□□ -0.9
USB1-212ENST00000566082 NAA11Q9BSU3 229 aaPredicted RBP9.4□□□□□ -0.9
USB1-212ENST00000566082 TOLLIPQ9H0E2 274 aa9.4□□□□□ -0.9
USB1-212ENST00000566082 AK3Q9UIJ7 227 aa9.4□□□□□ -0.9
USB1-212ENST00000566082 PILRAQ9UKJ1 303 aa9.4□□□□□ -0.9
USB1-212ENST00000566082 NSG2Q9Y328 171 aa9.4□□□□□ -0.9
USB1-212ENST00000566082 TK1P04183 234 aa9.4□□□□□ -0.9
USB1-212ENST00000566082 GUSBP08236 651 aa9.4□□□□□ -0.9
USB1-212ENST00000566082 SLC25A4P12235 298 aa9.4□□□□□ -0.9
USB1-212ENST00000566082 FOLR1P15328 257 aa9.4□□□□□ -0.9
USB1-212ENST00000566082 TMEM33P57088 247 aa9.4□□□□□ -0.9
USB1-212ENST00000566082 C9orf152Q5JTZ5 239 aa9.4□□□□□ -0.9
USB1-212ENST00000566082 PLCXD3Q63HM9 321 aa9.4□□□□□ -0.9
USB1-212ENST00000566082 MOB3CQ70IA8 216 aa9.4□□□□□ -0.9
USB1-212ENST00000566082 OR6S1Q8NH40 331 aa9.4□□□□□ -0.9
USB1-212ENST00000566082 FRZBQ92765 325 aa9.4□□□□□ -0.9
USB1-212ENST00000566082 RAB33BQ9H082 229 aa9.4□□□□□ -0.9
USB1-212ENST00000566082 KLK3P07288 261 aaPredicted RBP9.4□□□□□ -0.91
USB1-212ENST00000566082 FPR2P25090 351 aa9.4□□□□□ -0.91
USB1-212ENST00000566082 KNTC1P50748 2209 aa9.4□□□□□ -0.91
USB1-212ENST00000566082 SEMA6DQ8NFY4 1073 aa9.4□□□□□ -0.91
USB1-212ENST00000566082 LILRB1Q8NHL6 650 aaPredicted RBP9.4□□□□□ -0.91
USB1-212ENST00000566082 PLA2G2FQ9BZM2 168 aa9.4□□□□□ -0.91
USB1-212ENST00000566082 PLEKHA2Q9HB19 425 aa9.4□□□□□ -0.91
USB1-212ENST00000566082 NECAP2Q9NVZ3 263 aa9.4□□□□□ -0.91
USB1-212ENST00000566082 A0A1W2PPC1 479 aa9.39□□□□□ -0.91
USB1-212ENST00000566082 C7orf77A4D0Y5 90 aa9.39□□□□□ -0.91
USB1-212ENST00000566082 FRG2CA6NGY1 282 aa9.39□□□□□ -0.91
USB1-212ENST00000566082 C9J4A7 227 aa9.39□□□□□ -0.91
USB1-212ENST00000566082 LMX1BO60663 402 aa9.39□□□□□ -0.91
USB1-212ENST00000566082 ZNF205O95201 554 aa9.39□□□□□ -0.91
USB1-212ENST00000566082 VSIG8P0DPA2 414 aa9.39□□□□□ -0.91
USB1-212ENST00000566082 RPS4Y1P22090 263 aaKnown RBP9.39□□□□□ -0.91
USB1-212ENST00000566082 CD38P28907 300 aa9.39□□□□□ -0.91
USB1-212ENST00000566082 MECP2P51608 486 aaKnown RBP9.39□□□□□ -0.91
USB1-212ENST00000566082 CNN3Q15417 329 aaKnown RBP9.39□□□□□ -0.91
USB1-212ENST00000566082 SSX2Q16385 188 aa9.39□□□□□ -0.91
USB1-212ENST00000566082 ZNF239Q16600 458 aaKnown RBP9.39□□□□□ -0.91
USB1-212ENST00000566082 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.39□□□□□ -0.91
USB1-212ENST00000566082 MICBQ29980 383 aa9.39□□□□□ -0.91
USB1-212ENST00000566082 KIAA0895LQ68EN5 471 aa9.39□□□□□ -0.91
USB1-212ENST00000566082 SLC25A28Q96A46 364 aa9.39□□□□□ -0.91
USB1-212ENST00000566082 MENTQ9BUN1 341 aa9.39□□□□□ -0.91
USB1-212ENST00000566082 OBP2AQ9NY56 170 aa9.39□□□□□ -0.91
USB1-212ENST00000566082 CD207Q9UJ71 328 aa9.39□□□□□ -0.91
USB1-212ENST00000566082 VWA8A3KMH1 1905 aa9.39□□□□□ -0.91
USB1-212ENST00000566082 A0A0U1RQK1 487 aa9.39□□□□□ -0.91
USB1-212ENST00000566082 RER1O15258 196 aa9.39□□□□□ -0.91
USB1-212ENST00000566082 NKX2-1P43699 371 aaPredicted RBP9.39□□□□□ -0.91
USB1-212ENST00000566082 PLXDC2Q6UX71 529 aa9.39□□□□□ -0.91
USB1-212ENST00000566082 MR1Q95460 341 aa9.39□□□□□ -0.91
USB1-212ENST00000566082 SAT2Q96F10 170 aaPredicted RBP9.39□□□□□ -0.91
USB1-212ENST00000566082 ZNF251Q9BRH9 671 aa9.39□□□□□ -0.91
USB1-212ENST00000566082 ZNF426Q9BUY5 554 aa9.39□□□□□ -0.91
USB1-212ENST00000566082 NKX2-4Q9H2Z4 354 aa9.39□□□□□ -0.91
USB1-212ENST00000566082 ALKBH4Q9NXW9 302 aa9.39□□□□□ -0.91
USB1-212ENST00000566082 OR5AC2Q9NZP5 309 aa9.39□□□□□ -0.91
USB1-212ENST00000566082 KCNK7Q9Y2U2 307 aa9.39□□□□□ -0.91
USB1-212ENST00000566082 HLA-DOBP13765 273 aa9.39□□□□□ -0.91
USB1-212ENST00000566082 SKP2Q13309 424 aa9.39□□□□□ -0.91
USB1-212ENST00000566082 TMEM268Q5VZI3 342 aa9.39□□□□□ -0.91
USB1-212ENST00000566082 FAM109BQ6ICB4 259 aaPredicted RBP9.39□□□□□ -0.91
USB1-212ENST00000566082 TMPPEQ6ZT21 453 aa9.39□□□□□ -0.91
USB1-212ENST00000566082 Q7L0L9 218 aa9.39□□□□□ -0.91
USB1-212ENST00000566082 CATSPERDQ86XM0 798 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms